Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2611 and Psyr_2612 are separated by 331 nucleotides Psyr_2612 and Psyr_2613 are separated by 80 nucleotides
Psyr_2611: Psyr_2611 - Amino acid adenylation, at 3,093,701 to 3,095,545
_2611
Psyr_2612: Psyr_2612 - syrP protein, putative, at 3,095,877 to 3,096,938
_2612
Psyr_2613: Psyr_2613 - Cyclic peptide transporter, at 3,097,019 to 3,098,719
_2613
Position (kb)
3095
3096
3097 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3095.040 kb on + strand, within Psyr_2611 at 3095.040 kb on + strand, within Psyr_2611 at 3095.041 kb on - strand, within Psyr_2611 at 3095.049 kb on + strand, within Psyr_2611 at 3095.049 kb on + strand, within Psyr_2611 at 3095.050 kb on - strand, within Psyr_2611 at 3095.050 kb on - strand, within Psyr_2611 at 3095.050 kb on - strand, within Psyr_2611 at 3095.062 kb on + strand, within Psyr_2611 at 3095.063 kb on - strand, within Psyr_2611 at 3095.118 kb on - strand, within Psyr_2611 at 3095.253 kb on + strand, within Psyr_2611 at 3095.253 kb on + strand, within Psyr_2611 at 3095.253 kb on + strand, within Psyr_2611 at 3095.254 kb on - strand, within Psyr_2611 at 3095.254 kb on - strand, within Psyr_2611 at 3095.254 kb on - strand, within Psyr_2611 at 3095.254 kb on - strand, within Psyr_2611 at 3095.316 kb on + strand, within Psyr_2611 at 3095.316 kb on + strand, within Psyr_2611 at 3095.316 kb on + strand, within Psyr_2611 at 3095.562 kb on + strand at 3095.563 kb on - strand at 3095.726 kb on + strand at 3095.892 kb on - strand at 3096.264 kb on + strand, within Psyr_2612 at 3096.430 kb on - strand, within Psyr_2612 at 3096.723 kb on + strand, within Psyr_2612 at 3096.724 kb on - strand, within Psyr_2612 at 3097.390 kb on + strand, within Psyr_2613 at 3097.538 kb on + strand, within Psyr_2613 at 3097.538 kb on + strand, within Psyr_2613 at 3097.538 kb on + strand, within Psyr_2613 at 3097.718 kb on + strand, within Psyr_2613 at 3097.724 kb on + strand, within Psyr_2613 at 3097.724 kb on + strand, within Psyr_2613 at 3097.725 kb on - strand, within Psyr_2613 at 3097.725 kb on - strand, within Psyr_2613 at 3097.868 kb on + strand, within Psyr_2613 at 3097.868 kb on + strand, within Psyr_2613 at 3097.869 kb on - strand, within Psyr_2613 at 3097.869 kb on - strand, within Psyr_2613 at 3097.927 kb on + strand, within Psyr_2613 at 3097.928 kb on - strand, within Psyr_2613
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 3,095,040 + Psyr_2611 0.73 -1.4 3,095,040 + Psyr_2611 0.73 +0.3 3,095,041 - Psyr_2611 0.73 -0.6 3,095,049 + Psyr_2611 0.73 +1.5 3,095,049 + Psyr_2611 0.73 -2.9 3,095,050 - Psyr_2611 0.73 -1.3 3,095,050 - Psyr_2611 0.73 +0.0 3,095,050 - Psyr_2611 0.73 -0.7 3,095,062 + Psyr_2611 0.74 -0.1 3,095,063 - Psyr_2611 0.74 -0.2 3,095,118 - Psyr_2611 0.77 -0.3 3,095,253 + Psyr_2611 0.84 +0.5 3,095,253 + Psyr_2611 0.84 -0.9 3,095,253 + Psyr_2611 0.84 +0.6 3,095,254 - Psyr_2611 0.84 +0.5 3,095,254 - Psyr_2611 0.84 +1.0 3,095,254 - Psyr_2611 0.84 +0.9 3,095,254 - Psyr_2611 0.84 -0.3 3,095,316 + Psyr_2611 0.88 -1.0 3,095,316 + Psyr_2611 0.88 -0.2 3,095,316 + Psyr_2611 0.88 -0.9 3,095,562 + +1.1 3,095,563 - +0.0 3,095,726 + +0.9 3,095,892 - -0.4 3,096,264 + Psyr_2612 0.36 -1.4 3,096,430 - Psyr_2612 0.52 -1.0 3,096,723 + Psyr_2612 0.80 -1.1 3,096,724 - Psyr_2612 0.80 -0.5 3,097,390 + Psyr_2613 0.22 -0.1 3,097,538 + Psyr_2613 0.31 -0.8 3,097,538 + Psyr_2613 0.31 -0.3 3,097,538 + Psyr_2613 0.31 +0.0 3,097,718 + Psyr_2613 0.41 -0.5 3,097,724 + Psyr_2613 0.41 -1.1 3,097,724 + Psyr_2613 0.41 +2.4 3,097,725 - Psyr_2613 0.42 -0.5 3,097,725 - Psyr_2613 0.42 -0.1 3,097,868 + Psyr_2613 0.50 +2.2 3,097,868 + Psyr_2613 0.50 +0.2 3,097,869 - Psyr_2613 0.50 -1.8 3,097,869 - Psyr_2613 0.50 +0.9 3,097,927 + Psyr_2613 0.53 +1.0 3,097,928 - Psyr_2613 0.53 -0.0
Or see this region's nucleotide sequence