Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS06975

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,280,544	+		MMJJ_RS06970	0.11	-0.2
1,280,790	+		MMJJ_RS06970	0.34	+1.4
1,280,874	+		MMJJ_RS06970	0.42	-0.6
1,280,946	-		MMJJ_RS06970	0.48	+0.4
1,280,970	-		MMJJ_RS06970	0.51	+0.4
1,280,974	+				+1.4
1,281,213	+				+0.4
1,281,489	-				-1.4
1,281,734	-		MMJJ_RS06975	0.82	+5.4
1,281,744	-		MMJJ_RS06975	0.86	+2.3
1,281,745	+		MMJJ_RS06975	0.86	+3.9
1,281,745	+		MMJJ_RS06975	0.86	+2.6
1,281,747	+		MMJJ_RS06975	0.87	+2.0
1,281,747	+		MMJJ_RS06975	0.87	-2.0
1,281,752	+		MMJJ_RS06975	0.89	-1.5
1,281,752	+		MMJJ_RS06975	0.89	-2.0
1,281,768	+				+1.4
1,281,768	+				+0.1
1,281,797	-				+3.1
1,281,798	+				+3.3
1,281,819	-				+2.0
1,281,819	-				-1.8
1,281,819	-				+2.6
1,281,819	-				-1.2
1,281,819	-				-0.4
1,281,819	-				-0.6
1,281,819	-				+2.1
1,281,819	-				-1.2
1,281,820	+				-3.7
1,281,820	+				-0.1
1,281,820	+				-1.2
1,281,820	+				-0.0
1,281,820	+				+0.6
1,281,821	-				-0.6
1,281,821	-				+2.4
1,281,821	-				+1.5
1,281,821	-				-1.7
1,281,821	-				-2.2
1,281,821	-				-2.2
1,281,821	-				-2.7
1,281,821	-				+1.9
1,281,821	-				-0.2
1,281,821	-				+4.5
1,281,821	-				-2.9
1,281,821	-				+1.4
1,281,821	-				+1.7
1,281,822	+				-0.6
1,281,822	+				-1.8
1,281,822	+				-1.0
1,281,822	+				+1.0
1,281,822	+				+1.8
1,281,822	+				+0.6
1,281,822	+				-1.1
1,281,822	+				+1.6
1,281,823	-				-0.6
1,281,824	+				-0.6
1,281,824	+				+3.6
1,281,824	+				-0.7
1,281,826	+				+0.8
1,281,826	+				+0.0
1,281,826	+				-0.4
1,281,912	-				-0.6
1,282,130	-		MMJJ_RS06980	0.49	-1.4
1,282,130	-		MMJJ_RS06980	0.49	-0.2
1,282,335	-				-1.0
1,282,363	-				+0.5
1,282,363	-				-1.0
1,282,364	+				-3.2
1,282,387	-				+1.7
1,282,387	-				+1.6
1,282,387	-				+1.0
1,282,398	-				+0.4
1,282,402	-				-0.2
1,282,481	+				-0.2