Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12810

Experiment: m.b. 1-ethyl-3-methylimidazolium lysine 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 1-ethyl-3-methylimidazolium lysine 1 mM
1,324,000	-				-0.6
1,324,002	+				-0.0
1,324,002	+				-0.8
1,324,105	-				-0.6
1,324,110	-				+0.9
1,324,121	+				-0.1
1,324,520	+				+0.7
1,324,530	+				-0.3
1,324,534	-				+0.8
1,324,535	+				+0.1
1,324,535	+				-1.3
1,324,543	-				+0.6
1,324,593	+				-0.2
1,324,601	-				-2.0
1,324,619	+				-0.7
1,324,624	+				+0.6
1,324,624	+				+0.7
1,324,635	-				-0.4
1,324,691	-				-0.3
1,324,741	+				+0.5
1,324,825	-				-0.3
1,324,874	+				+0.4
1,324,874	+				-0.1
1,324,874	+				+0.7
1,324,882	-				-0.1
1,324,882	-				-0.0
1,324,882	-				-0.2
1,324,893	-				-0.0
1,324,940	-				+0.2
1,325,005	+		PGA1_c12810	0.11	-0.3
1,325,013	+		PGA1_c12810	0.11	-1.5
1,325,015	+		PGA1_c12810	0.11	+2.1
1,325,015	+		PGA1_c12810	0.11	-1.3
1,325,023	-		PGA1_c12810	0.12	-1.1
1,325,028	+		PGA1_c12810	0.12	+0.7
1,325,079	+		PGA1_c12810	0.16	-0.1
1,325,079	+		PGA1_c12810	0.16	-0.5
1,325,079	+		PGA1_c12810	0.16	-0.3
1,325,079	+		PGA1_c12810	0.16	-0.8
1,325,079	+		PGA1_c12810	0.16	+0.0
1,325,087	-		PGA1_c12810	0.17	-0.5
1,325,087	-		PGA1_c12810	0.17	-0.9
1,325,120	-		PGA1_c12810	0.19	+0.2
1,325,193	+		PGA1_c12810	0.25	-0.4
1,325,193	+		PGA1_c12810	0.25	-0.0
1,325,323	+		PGA1_c12810	0.34	-0.1
1,325,323	+		PGA1_c12810	0.34	+1.6
1,325,333	-		PGA1_c12810	0.35	+0.7
1,325,450	+		PGA1_c12810	0.44	+0.2
1,325,525	+		PGA1_c12810	0.50	+1.0
1,325,533	-		PGA1_c12810	0.50	-0.8
1,325,535	+		PGA1_c12810	0.50	-0.0
1,325,559	+		PGA1_c12810	0.52	-0.6
1,325,565	-		PGA1_c12810	0.53	-1.7
1,325,567	-		PGA1_c12810	0.53	-1.0
1,325,605	+		PGA1_c12810	0.56	+0.2
1,325,688	-		PGA1_c12810	0.62	+0.3
1,325,748	-		PGA1_c12810	0.66	-0.8
1,325,753	-		PGA1_c12810	0.67	-0.3
1,325,816	+		PGA1_c12810	0.71	-1.6
1,325,824	-		PGA1_c12810	0.72	-0.3
1,325,859	+		PGA1_c12810	0.75	-2.0
1,325,881	+		PGA1_c12810	0.76	-0.6
1,326,010	-		PGA1_c12810	0.86	+1.1
1,326,035	+		PGA1_c12810	0.88	-0.9
1,326,113	+				+1.0
1,326,215	+				+0.5
1,326,258	+				+1.1
1,326,368	+				-0.1
1,326,443	+		PGA1_c12820	0.15	-0.1
1,326,702	+		PGA1_c12820	0.34	-0.1
1,326,760	+		PGA1_c12820	0.39	-0.7
1,326,775	+		PGA1_c12820	0.40	+0.1
1,326,824	+		PGA1_c12820	0.44	-0.9
1,326,872	-		PGA1_c12820	0.48	-0.5
1,326,912	-		PGA1_c12820	0.51	-0.4
1,326,960	-		PGA1_c12820	0.54	-0.0
1,326,985	-		PGA1_c12820	0.56	-0.1
1,327,012	+		PGA1_c12820	0.58	+0.1
1,327,018	-		PGA1_c12820	0.59	-0.2
1,327,018	-		PGA1_c12820	0.59	-1.0
1,327,020	-		PGA1_c12820	0.59	+0.5
1,327,020	-		PGA1_c12820	0.59	-0.1
1,327,020	-		PGA1_c12820	0.59	+0.5
1,327,070	+		PGA1_c12820	0.63	+1.5
1,327,108	-		PGA1_c12820	0.66	-0.5
1,327,108	-		PGA1_c12820	0.66	+1.5
1,327,108	-		PGA1_c12820	0.66	+0.6
1,327,108	-		PGA1_c12820	0.66	+0.2
1,327,118	+		PGA1_c12820	0.66	+1.6
1,327,150	+		PGA1_c12820	0.69	-0.3
1,327,150	+		PGA1_c12820	0.69	-0.6
1,327,155	+		PGA1_c12820	0.69	+0.3
1,327,164	-		PGA1_c12820	0.70	+0.5
1,327,182	+		PGA1_c12820	0.71	+0.3
1,327,182	+		PGA1_c12820	0.71	-0.0
1,327,190	-		PGA1_c12820	0.72	-0.4
1,327,190	-		PGA1_c12820	0.72	-0.8
1,327,190	-		PGA1_c12820	0.72	-1.6
1,327,191	-		PGA1_c12820	0.72	-2.3