Experiment: Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02780 and HSERO_RS02785 are separated by 401 nucleotides HSERO_RS02785 and HSERO_RS02790 are separated by 97 nucleotides HSERO_RS02790 and HSERO_RS02795 are separated by 50 nucleotides HSERO_RS02795 and HSERO_RS02800 are separated by 220 nucleotides
HSERO_RS02780: HSERO_RS02780 - hypothetical protein, at 613,202 to 613,435
_RS02780
HSERO_RS02785: HSERO_RS02785 - hypothetical protein, at 613,837 to 614,028
_RS02785
HSERO_RS02790: HSERO_RS02790 - hypothetical protein, at 614,126 to 614,314
_RS02790
HSERO_RS02795: HSERO_RS02795 - alcohol dehydrogenase, at 614,365 to 615,525
_RS02795
HSERO_RS02800: HSERO_RS02800 - hypothetical protein, at 615,746 to 616,729
_RS02800
Position (kb) 614
615
616 Strain fitness (log2 ratio) -2
-1
0
1
2 at 613.395 kb on - strand, within HSERO_RS02780 at 613.709 kb on + strand at 613.717 kb on - strand at 613.717 kb on - strand at 613.717 kb on - strand at 613.878 kb on + strand, within HSERO_RS02785 at 613.997 kb on - strand, within HSERO_RS02785 at 614.118 kb on - strand at 614.275 kb on + strand, within HSERO_RS02790 at 614.285 kb on + strand, within HSERO_RS02790 at 614.344 kb on - strand at 614.532 kb on + strand, within HSERO_RS02795 at 615.049 kb on + strand, within HSERO_RS02795 at 615.342 kb on + strand, within HSERO_RS02795 at 615.540 kb on + strand at 615.540 kb on + strand at 615.663 kb on - strand at 616.236 kb on - strand, within HSERO_RS02800
Per-strain Table
Position Strand Gene LocusTag Fraction Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB remove 613,395 - HSERO_RS02780 0.82 -0.5 613,709 + +0.0 613,717 - +0.1 613,717 - -0.3 613,717 - +0.8 613,878 + HSERO_RS02785 0.21 -0.3 613,997 - HSERO_RS02785 0.83 +1.0 614,118 - -0.3 614,275 + HSERO_RS02790 0.79 -0.2 614,285 + HSERO_RS02790 0.84 -0.0 614,344 - -2.1 614,532 + HSERO_RS02795 0.14 +2.7 615,049 + HSERO_RS02795 0.59 +0.1 615,342 + HSERO_RS02795 0.84 +0.6 615,540 + +0.7 615,540 + -0.4 615,663 - +2.2 616,236 - HSERO_RS02800 0.50 -0.9
Or see this region's nucleotide sequence