Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37270

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,833,573	+				+0.5
3,833,574	-				-0.1
3,833,574	-				-0.1
3,833,770	+				+0.2
3,834,138	-				+1.1
3,834,138	-				-0.7
3,834,261	+				+1.3
3,834,373	+		RR42_RS37270	0.30	+0.6
3,834,373	+		RR42_RS37270	0.30	+0.6
3,834,373	+		RR42_RS37270	0.30	-0.8
3,834,373	+		RR42_RS37270	0.30	+1.1
3,834,421	+		RR42_RS37270	0.40	-0.2
3,834,421	+		RR42_RS37270	0.40	-0.5
3,834,422	-		RR42_RS37270	0.40	+0.6
3,834,422	-		RR42_RS37270	0.40	+0.7
3,834,422	-		RR42_RS37270	0.40	+1.1
3,834,422	-		RR42_RS37270	0.40	+0.3
3,834,422	-		RR42_RS37270	0.40	+2.1
3,834,641	+		RR42_RS37270	0.89	-0.5
3,834,641	+		RR42_RS37270	0.89	-1.7
3,834,641	+		RR42_RS37270	0.89	-1.0
3,834,642	-		RR42_RS37270	0.90	+0.1
3,834,642	-		RR42_RS37270	0.90	+1.1
3,834,642	-		RR42_RS37270	0.90	-1.5
3,834,643	+				+0.9
3,834,644	-				-0.4
3,834,644	-				+0.3
3,834,689	-				-0.6
3,834,689	-				-2.1
3,835,055	+				-0.0
3,835,056	-				-3.0
3,835,169	+				+0.6
3,835,270	+				+1.1
3,835,270	+				-1.7
3,835,271	-				-0.1
3,835,271	-				-0.8
3,835,271	-				-1.0
3,835,340	+		RR42_RS37280	0.14	-0.5
3,835,341	-		RR42_RS37280	0.14	+0.8
3,835,372	-		RR42_RS37280	0.18	-0.9
3,835,425	+		RR42_RS37280	0.24	+0.0
3,835,426	-		RR42_RS37280	0.25	+1.9
3,835,426	-		RR42_RS37280	0.25	+0.4
3,835,485	+		RR42_RS37280	0.32	+0.4
3,835,486	-		RR42_RS37280	0.32	+0.0
3,835,502	+		RR42_RS37280	0.34	-0.3
3,835,502	+		RR42_RS37280	0.34	-1.0
3,835,503	-		RR42_RS37280	0.34	+0.3
3,835,503	-		RR42_RS37280	0.34	-0.3