Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18290

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,961,008	-		RR42_RS18280	0.71	+0.3
3,961,027	+		RR42_RS18280	0.76	+1.8
3,961,028	-		RR42_RS18280	0.77	+0.5
3,961,075	+		RR42_RS18280	0.89	+0.0
3,961,076	-		RR42_RS18280	0.89	-0.1
3,961,076	-		RR42_RS18280	0.89	+0.6
3,961,082	+				+0.6
3,961,082	+				-0.9
3,961,082	+				+0.6
3,961,082	+				+1.0
3,961,086	+				-1.9
3,961,086	+				-0.3
3,961,086	+				+0.5
3,961,086	+				-1.9
3,961,086	+				-1.0
3,961,086	+				-0.6
3,961,087	-				+0.7
3,961,087	-				-1.3
3,961,105	+				-0.5
3,961,105	+				-1.0
3,961,126	+				-0.2
3,961,126	+				-0.3
3,961,126	+				+1.9
3,961,126	+				+0.6
3,961,126	+				+0.6
3,961,126	+				-0.8
3,961,126	+				-0.2
3,961,126	+				+2.6
3,961,126	+				+0.2
3,961,126	+				+1.5
3,961,126	+				-1.0
3,961,127	-				+0.4
3,961,127	-				-0.8
3,961,127	-				-2.0
3,961,127	-				-0.5
3,961,127	-				+0.3
3,961,127	-				-1.7
3,961,182	+				+0.2
3,961,182	+				-1.7
3,961,183	-				-1.3
3,961,183	-				+0.1
3,961,183	-				-2.2
3,961,183	-				-1.0
3,961,183	-				-0.8
3,961,235	+				+0.8
3,962,277	+		RR42_RS18290	0.39	+0.7
3,962,277	+		RR42_RS18290	0.39	+0.1
3,962,277	+		RR42_RS18290	0.39	+0.3
3,962,278	-		RR42_RS18290	0.39	+0.7
3,962,278	-		RR42_RS18290	0.39	-0.5
3,962,289	+		RR42_RS18290	0.41	-0.1
3,962,289	+		RR42_RS18290	0.41	+0.9
3,962,290	-		RR42_RS18290	0.41	+0.4
3,962,290	-		RR42_RS18290	0.41	+0.1
3,962,322	+		RR42_RS18290	0.45	-1.2
3,962,457	+		RR42_RS18290	0.64	-2.5
3,962,457	+		RR42_RS18290	0.64	-3.4
3,962,457	+		RR42_RS18290	0.64	+0.3
3,962,458	-		RR42_RS18290	0.64	+2.3
3,962,458	-		RR42_RS18290	0.64	-0.3
3,962,619	+		RR42_RS18290	0.86	+0.9
3,962,626	-		RR42_RS18290	0.87	-1.2
3,962,626	-		RR42_RS18290	0.87	-0.9
3,962,626	-		RR42_RS18290	0.87	-0.2
3,962,644	+		RR42_RS18290	0.89	+1.1
3,962,644	+		RR42_RS18290	0.89	+0.8
3,962,645	-		RR42_RS18290	0.90	+0.1
3,962,645	-		RR42_RS18290	0.90	+0.5
3,962,645	-		RR42_RS18290	0.90	+1.0
3,962,666	+				-0.9
3,962,666	+				+0.9
3,962,666	+				-0.8
3,962,666	+				-0.0
3,962,667	-				-1.0
3,962,667	-				+0.5
3,962,667	-				-0.6
3,962,668	+				-0.2
3,962,669	-				-1.5
3,962,881	-				-2.7
3,963,144	+				+1.1
3,963,144	+				+0.2
3,963,365	+		RR42_RS18295	0.12	-2.5
3,963,555	-		RR42_RS18295	0.25	-4.4
3,963,578	+		RR42_RS18295	0.26	-2.6
3,963,579	-		RR42_RS18295	0.26	-3.0
3,963,579	-		RR42_RS18295	0.26	-0.7
3,963,579	-		RR42_RS18295	0.26	-2.7
3,963,579	-		RR42_RS18295	0.26	-3.4
3,963,579	-		RR42_RS18295	0.26	-5.0
3,963,580	+		RR42_RS18295	0.26	-5.3
3,963,580	+		RR42_RS18295	0.26	-0.7
3,963,580	+		RR42_RS18295	0.26	-1.4
3,963,581	-		RR42_RS18295	0.26	-3.6
3,963,581	-		RR42_RS18295	0.26	-0.8
3,963,692	+		RR42_RS18295	0.34	-2.8
3,963,692	+		RR42_RS18295	0.34	-4.1