Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16835

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,641,681	-		RR42_RS16830	0.36	-0.5
3,641,681	-		RR42_RS16830	0.36	+3.4
3,641,681	-		RR42_RS16830	0.36	-1.5
3,641,702	+		RR42_RS16830	0.38	-2.2
3,641,703	-		RR42_RS16830	0.38	+0.2
3,641,703	-		RR42_RS16830	0.38	-0.4
3,641,703	-		RR42_RS16830	0.38	-1.1
3,641,703	-		RR42_RS16830	0.38	+0.7
3,641,703	-		RR42_RS16830	0.38	-0.2
3,641,756	+		RR42_RS16830	0.43	+0.9
3,641,961	-		RR42_RS16830	0.60	+0.7
3,641,975	+		RR42_RS16830	0.62	-1.2
3,641,975	+		RR42_RS16830	0.62	+0.1
3,642,106	-		RR42_RS16830	0.73	+0.5
3,642,128	+		RR42_RS16830	0.75	+1.9
3,642,141	-		RR42_RS16830	0.76	-0.7
3,642,413	+				+0.0
3,642,413	+				+0.2
3,642,413	+				+0.5
3,642,413	-				+0.5
3,642,414	-				-1.5
3,642,414	-				-0.3
3,642,414	-				-1.5
3,642,414	-				-3.0
3,642,420	-				-0.1
3,642,429	+				-0.0
3,642,986	-		RR42_RS16835	0.63	-0.7
3,642,986	-		RR42_RS16835	0.63	+1.3
3,643,032	+		RR42_RS16835	0.68	-3.0
3,643,032	+		RR42_RS16835	0.68	+0.4
3,643,033	-		RR42_RS16835	0.69	-2.0
3,643,273	+				-1.2
3,643,274	-				+0.9
3,643,317	-				-0.8
3,643,550	-		RR42_RS16840	0.18	+1.6
3,643,933	+		RR42_RS16840	0.59	+1.8
3,643,934	-		RR42_RS16840	0.60	-0.1
3,644,084	-		RR42_RS16840	0.76	+1.8
3,644,084	-		RR42_RS16840	0.76	+2.3
3,644,084	-		RR42_RS16840	0.76	+1.3
3,644,131	+		RR42_RS16840	0.81	-0.8
3,644,132	-		RR42_RS16840	0.81	-1.2
3,644,132	-		RR42_RS16840	0.81	-1.0
3,644,132	-		RR42_RS16840	0.81	-1.4
3,644,237	-				-1.3
3,644,237	-				-0.1
3,644,248	+				+0.1
3,644,248	+				+1.0