Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14175

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,048,819	+				-2.3
3,048,819	+				-1.1
3,048,819	+				-1.5
3,048,863	+				-1.9
3,048,864	-				-0.6
3,048,901	-				-1.0
3,048,993	+		RR42_RS14170	0.19	-1.4
3,048,993	+		RR42_RS14170	0.19	-0.4
3,048,993	+		RR42_RS14170	0.19	+0.0
3,048,993	+		RR42_RS14170	0.19	+0.2
3,048,994	-		RR42_RS14170	0.19	-0.7
3,048,994	-		RR42_RS14170	0.19	-3.9
3,048,994	-		RR42_RS14170	0.19	-0.4
3,049,060	+		RR42_RS14170	0.30	+1.7
3,049,060	+		RR42_RS14170	0.30	+2.3
3,049,060	+		RR42_RS14170	0.30	-2.9
3,049,061	-		RR42_RS14170	0.30	-1.0
3,049,061	-		RR42_RS14170	0.30	-1.5
3,049,437	+				+1.0
3,049,438	-				-0.5
3,049,526	+				+0.0
3,049,526	+				+0.1
3,049,526	+				+0.6
3,049,526	+				+1.2
3,049,527	-				-0.9
3,049,527	-				-0.5
3,050,161	+		RR42_RS14175	0.50	+0.6
3,050,177	-		RR42_RS14175	0.52	+1.2
3,050,335	+		RR42_RS14175	0.64	+0.5
3,050,335	+		RR42_RS14175	0.64	-0.3
3,050,335	+		RR42_RS14175	0.64	+1.2
3,050,336	-		RR42_RS14175	0.64	-1.2
3,050,336	-		RR42_RS14175	0.64	-0.3
3,050,494	+		RR42_RS14175	0.77	-1.2
3,050,494	+		RR42_RS14175	0.77	-0.4
3,050,495	-		RR42_RS14175	0.77	+0.8
3,050,495	-		RR42_RS14175	0.77	-0.6
3,050,495	-		RR42_RS14175	0.77	+0.4
3,050,608	+		RR42_RS14175	0.85	+0.6
3,050,656	-		RR42_RS14175	0.89	+1.8
3,050,791	+				+2.5
3,050,791	+				-0.0
3,050,791	+				-2.9
3,050,792	-				-0.4
3,050,870	-				-1.4
3,050,870	-				-0.4
3,050,936	+				+1.9
3,050,936	+				+0.5
3,050,937	-				-0.1
3,050,952	+				+0.0
3,050,961	+				+1.7
3,050,996	-				+0.5
3,051,185	-		RR42_RS14180	0.78	+1.0
3,051,265	-				+0.0
3,051,598	-		RR42_RS14185	0.19	+2.0
3,051,692	+		RR42_RS14185	0.26	+0.9
3,051,692	+		RR42_RS14185	0.26	-0.6
3,051,692	+		RR42_RS14185	0.26	-2.8
3,051,693	-		RR42_RS14185	0.26	+0.6
3,051,693	-		RR42_RS14185	0.26	+0.1
3,051,693	-		RR42_RS14185	0.26	+0.4
3,051,693	-		RR42_RS14185	0.26	-1.6
3,051,752	+		RR42_RS14185	0.30	+0.7
3,051,752	+		RR42_RS14185	0.30	+0.1
3,051,752	+		RR42_RS14185	0.30	-0.0
3,051,752	+		RR42_RS14185	0.30	-2.5
3,051,752	+		RR42_RS14185	0.30	+0.8
3,051,752	+		RR42_RS14185	0.30	-0.9
3,051,752	+		RR42_RS14185	0.30	-0.1
3,051,752	+		RR42_RS14185	0.30	+0.1
3,051,752	-		RR42_RS14185	0.30	+1.2
3,051,753	-		RR42_RS14185	0.30	-1.9