Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03817

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,980,966	+		CCNA_03816	0.60	-2.6
3,981,135	+		CCNA_03816	0.68	-1.4
3,981,135	+		CCNA_03816	0.68	-0.1
3,981,135	+		CCNA_03816	0.68	+0.5
3,981,137	+		CCNA_03816	0.68	-0.8
3,981,143	-		CCNA_03816	0.69	-0.1
3,981,144	+		CCNA_03816	0.69	-0.1
3,981,152	-		CCNA_03816	0.69	+0.5
3,981,152	-		CCNA_03816	0.69	+1.2
3,981,163	+		CCNA_03816	0.69	-0.3
3,981,163	+		CCNA_03816	0.69	+1.0
3,981,168	+		CCNA_03816	0.70	-0.3
3,981,168	+		CCNA_03816	0.70	+0.1
3,981,176	-		CCNA_03816	0.70	+0.2
3,981,176	-		CCNA_03816	0.70	+0.2
3,981,186	-		CCNA_03816	0.71	+1.1
3,981,241	+		CCNA_03816	0.73	-1.6
3,981,249	-		CCNA_03816	0.74	-0.6
3,981,274	+		CCNA_03816	0.75	-1.0
3,981,279	+		CCNA_03816	0.75	-0.3
3,981,282	-		CCNA_03816	0.75	+0.3
3,981,287	-		CCNA_03816	0.75	-0.3
3,981,287	-		CCNA_03816	0.75	+0.0
3,981,287	-		CCNA_03816	0.75	+0.2
3,981,287	-		CCNA_03816	0.75	+0.1
3,981,312	+		CCNA_03816	0.76	+1.3
3,981,340	+		CCNA_03816	0.78	-0.4
3,981,345	+		CCNA_03816	0.78	-1.7
3,981,348	-		CCNA_03816	0.78	-0.0
3,981,359	-		CCNA_03816	0.79	-0.1
3,981,365	-		CCNA_03816	0.79	+0.2
3,981,379	-		CCNA_03816	0.80	-0.8
3,981,392	+		CCNA_03816	0.80	-1.1
3,981,392	+		CCNA_03816	0.80	-1.0
3,981,447	-		CCNA_03816	0.83	+0.7
3,981,472	+		CCNA_03816	0.84	-0.3
3,981,472	+		CCNA_03816	0.84	+0.2
3,981,513	+		CCNA_03816	0.86	-0.5
3,981,520	-		CCNA_03816	0.86	-0.2
3,981,540	+		CCNA_03816	0.87	-0.8
3,981,572	+		CCNA_03816	0.89	+0.1
3,981,608	-				-0.1
3,981,617	+				+0.3
3,981,617	+				-0.9
3,981,625	-				-0.3
3,981,645	+				-0.3
3,981,653	-				-0.1
3,981,660	+				-0.3
3,981,660	+				-1.7
3,981,660	+				+0.7
3,981,668	-				+0.0
3,981,668	-				+0.8
3,981,668	-				+0.7
3,981,668	-				+0.3
3,981,668	-				-0.3
3,981,668	-				+1.5
3,981,670	+				+0.1
3,981,671	+				-0.2
3,981,678	-				-0.6
3,981,695	-				-0.1
3,981,697	+				+0.4
3,981,697	-				+1.0
3,981,702	+				+1.0
3,981,715	-				-0.2
3,981,721	+				+1.0
3,981,721	+				+0.0
3,981,721	+				-0.5
3,981,729	-				+0.3
3,981,748	-				-0.5
3,981,749	+				+0.2
3,981,774	-				-0.3
3,981,796	+				-0.1
3,981,798	+				-1.5
3,981,798	+				-0.2
3,981,808	+				-0.7
3,981,816	-				+0.2
3,981,843	+				+0.4
3,981,844	-				+0.2
3,981,851	-				+1.0
3,981,851	-				-0.4
3,981,879	-				-0.4
3,981,888	+				-0.3
3,981,888	+				+1.0
3,981,888	-				+1.7
3,981,896	+				+0.2
3,981,913	+				-0.6
3,981,927	+				+0.2
3,981,966	-				+1.1
3,981,976	+				+1.1
3,982,014	+				-0.1
3,982,038	-		CCNA_03817	0.12	+0.9
3,982,043	-		CCNA_03817	0.12	-0.7
3,982,043	-		CCNA_03817	0.12	+1.1
3,982,052	-		CCNA_03817	0.14	+0.4
3,982,091	-		CCNA_03817	0.18	-0.1
3,982,091	-		CCNA_03817	0.18	-0.9
3,982,118	+		CCNA_03817	0.21	+1.7
3,982,126	-		CCNA_03817	0.22	+0.6
3,982,126	-		CCNA_03817	0.22	-1.4
3,982,132	+		CCNA_03817	0.23	-0.3
3,982,140	-		CCNA_03817	0.24	-1.8
3,982,158	-		CCNA_03817	0.26	-1.1
3,982,296	-		CCNA_03817	0.42	+0.1
3,982,309	+		CCNA_03817	0.44	-0.0
3,982,309	+		CCNA_03817	0.44	+0.1
3,982,317	-		CCNA_03817	0.45	-0.5
3,982,419	+		CCNA_03817	0.57	-0.7
3,982,424	+		CCNA_03817	0.57	-1.3
3,982,424	+		CCNA_03817	0.57	-1.1
3,982,432	-		CCNA_03817	0.58	+1.1
3,982,432	-		CCNA_03817	0.58	-1.5
3,982,437	-		CCNA_03817	0.59	+1.1
3,982,486	-		CCNA_03817	0.65	-0.9
3,982,491	-		CCNA_03817	0.65	-1.5
3,982,504	+		CCNA_03817	0.67	-0.5
3,982,540	+		CCNA_03817	0.71	-0.3
3,982,540	+		CCNA_03817	0.71	-1.7
3,982,548	-		CCNA_03817	0.72	-1.2
3,982,548	-		CCNA_03817	0.72	+1.1
3,982,548	-		CCNA_03817	0.72	-0.1
3,982,548	-		CCNA_03817	0.72	-1.2
3,982,553	-		CCNA_03817	0.73	-0.3
3,982,578	+		CCNA_03817	0.76	-0.7
3,982,660	-		CCNA_03817	0.85	-0.6
3,982,736	+				-0.2
3,982,757	-				-0.3
3,982,780	+				+0.5
3,982,793	-				+1.1
3,982,973	+		CCNA_03818	0.54	+0.2
3,982,973	+		CCNA_03818	0.54	+0.2
3,982,973	+		CCNA_03818	0.54	+0.6
3,982,973	+		CCNA_03818	0.54	+0.2
3,982,973	+		CCNA_03818	0.54	+0.8
3,982,973	+		CCNA_03818	0.54	+0.4
3,983,070	-		CCNA_03818	0.82	+0.3
3,983,082	+		CCNA_03818	0.85	+0.3
3,983,089	-		CCNA_03818	0.87	-0.1
3,983,090	-		CCNA_03818	0.88	-0.5
3,983,104	+				+0.2
3,983,112	-				+1.1
3,983,112	-				-0.4
3,983,116	+				+0.4
3,983,116	+				+0.1
3,983,116	+				-0.5
3,983,116	+				-0.4
3,983,130	-				-0.4
3,983,139	+				-0.7
3,983,147	-				-1.0
3,983,149	+				+0.2
3,983,152	-				+0.3
3,983,154	+				+0.1
3,983,157	-				-0.6
3,983,162	-				-0.4
3,983,162	-				-1.1
3,983,241	+				-0.3
3,983,274	+				-1.0
3,983,288	-				-0.3
3,983,305	-				+1.2
3,983,322	-				-1.8
3,983,490	+				-0.2
3,983,490	+				-0.0
3,983,490	+				-0.3
3,983,545	-				-1.4
3,983,550	+				+0.5
3,983,560	+				-0.2
3,983,560	+				-1.2
3,983,567	-				+0.2
3,983,568	-				+0.1
3,983,568	-				-2.3
3,983,568	-				-1.9
3,983,580	+				-0.1
3,983,592	-				-1.2
3,983,670	-				-0.0
3,983,671	-				-1.4
3,983,686	-				-0.4
3,983,754	+				+0.2
3,983,754	+				-1.6
3,983,756	+				+0.1
3,983,766	+				+0.8
3,983,766	+				+0.0
3,983,774	-				+0.5