Experiment: Dilute LB (1/10)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07340 and BWI76_RS07345 are separated by 19 nucleotides BWI76_RS07345 and BWI76_RS07350 are separated by 131 nucleotides
BWI76_RS07340: BWI76_RS07340 - amidohydrolase, at 1,546,555 to 1,547,733
_RS07340
BWI76_RS07345: BWI76_RS07345 - family 3 extracellular solute-binding protein, at 1,547,753 to 1,548,529
_RS07345
BWI76_RS07350: BWI76_RS07350 - alcohol dehydrogenase, at 1,548,661 to 1,549,614
_RS07350
Position (kb)
1547
1548
1549 Strain fitness (log2 ratio)
-1
0
1 at 1546.777 kb on - strand, within BWI76_RS07340 at 1546.813 kb on + strand, within BWI76_RS07340 at 1546.824 kb on + strand, within BWI76_RS07340 at 1546.881 kb on - strand, within BWI76_RS07340 at 1546.929 kb on + strand, within BWI76_RS07340 at 1546.944 kb on + strand, within BWI76_RS07340 at 1546.947 kb on + strand, within BWI76_RS07340 at 1546.955 kb on - strand, within BWI76_RS07340 at 1546.972 kb on + strand, within BWI76_RS07340 at 1547.036 kb on + strand, within BWI76_RS07340 at 1547.228 kb on + strand, within BWI76_RS07340 at 1547.324 kb on + strand, within BWI76_RS07340 at 1547.644 kb on + strand at 1547.732 kb on - strand at 1547.734 kb on + strand at 1547.778 kb on - strand at 1547.778 kb on - strand at 1547.788 kb on - strand at 1547.855 kb on - strand, within BWI76_RS07345 at 1547.884 kb on + strand, within BWI76_RS07345 at 1547.929 kb on + strand, within BWI76_RS07345 at 1547.937 kb on - strand, within BWI76_RS07345 at 1547.943 kb on - strand, within BWI76_RS07345 at 1547.970 kb on + strand, within BWI76_RS07345 at 1548.030 kb on - strand, within BWI76_RS07345 at 1548.030 kb on - strand, within BWI76_RS07345 at 1548.067 kb on + strand, within BWI76_RS07345 at 1548.075 kb on - strand, within BWI76_RS07345 at 1548.075 kb on - strand, within BWI76_RS07345 at 1548.188 kb on + strand, within BWI76_RS07345 at 1548.201 kb on - strand, within BWI76_RS07345 at 1548.539 kb on + strand at 1548.553 kb on + strand at 1548.553 kb on + strand at 1548.561 kb on - strand at 1548.883 kb on - strand, within BWI76_RS07350 at 1548.883 kb on - strand, within BWI76_RS07350 at 1548.914 kb on - strand, within BWI76_RS07350 at 1549.476 kb on - strand, within BWI76_RS07350
Per-strain Table
Position Strand Gene LocusTag Fraction Dilute LB (1/10) remove 1,546,777 - BWI76_RS07340 0.19 -1.4 1,546,813 + BWI76_RS07340 0.22 -0.6 1,546,824 + BWI76_RS07340 0.23 +0.2 1,546,881 - BWI76_RS07340 0.28 +0.3 1,546,929 + BWI76_RS07340 0.32 -0.1 1,546,944 + BWI76_RS07340 0.33 +0.2 1,546,947 + BWI76_RS07340 0.33 -0.2 1,546,955 - BWI76_RS07340 0.34 -0.2 1,546,972 + BWI76_RS07340 0.35 +0.1 1,547,036 + BWI76_RS07340 0.41 +0.1 1,547,228 + BWI76_RS07340 0.57 +0.5 1,547,324 + BWI76_RS07340 0.65 -0.3 1,547,644 + +0.3 1,547,732 - +0.0 1,547,734 + -0.0 1,547,778 - -0.2 1,547,778 - -0.2 1,547,788 - +0.2 1,547,855 - BWI76_RS07345 0.13 +0.4 1,547,884 + BWI76_RS07345 0.17 +0.1 1,547,929 + BWI76_RS07345 0.23 +0.9 1,547,937 - BWI76_RS07345 0.24 -1.6 1,547,943 - BWI76_RS07345 0.24 +0.8 1,547,970 + BWI76_RS07345 0.28 +0.2 1,548,030 - BWI76_RS07345 0.36 -0.2 1,548,030 - BWI76_RS07345 0.36 +0.0 1,548,067 + BWI76_RS07345 0.40 +0.2 1,548,075 - BWI76_RS07345 0.41 +0.3 1,548,075 - BWI76_RS07345 0.41 +1.3 1,548,188 + BWI76_RS07345 0.56 +0.1 1,548,201 - BWI76_RS07345 0.58 +0.3 1,548,539 + -0.6 1,548,553 + +0.2 1,548,553 + +0.3 1,548,561 - -1.0 1,548,883 - BWI76_RS07350 0.23 +0.8 1,548,883 - BWI76_RS07350 0.23 -0.0 1,548,914 - BWI76_RS07350 0.27 -0.5 1,549,476 - BWI76_RS07350 0.85 +0.2
Or see this region's nucleotide sequence