Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2607

Experiment: Formate/Acetate-Sulfite (10/60-20 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (10/60-20 mM)
2,725,288	+				-0.1
2,725,303	-				+0.3
2,725,303	-				+0.4
2,725,303	-				-0.4
2,725,349	+				-0.6
2,725,375	+				-0.6
2,725,393	-				+1.0
2,725,401	+				-0.9
2,725,401	-				-0.7
2,725,403	+				-0.7
2,725,429	-				-0.1
2,725,528	-		DVU2605	0.32	-0.2
2,725,539	-		DVU2605	0.35	-0.4
2,725,580	+		DVU2605	0.44	-0.5
2,725,588	-		DVU2605	0.46	-1.1
2,725,588	-		DVU2605	0.46	+0.2
2,725,588	-		DVU2605	0.46	+0.1
2,725,588	-		DVU2605	0.46	-0.2
2,725,600	+		DVU2605	0.49	-0.4
2,725,606	+		DVU2605	0.50	+0.1
2,725,612	+		DVU2605	0.52	-1.0
2,725,670	+		DVU2605	0.65	-0.5
2,725,726	+		DVU2605	0.78	-0.5
2,725,726	-		DVU2605	0.78	-0.2
2,725,728	+		DVU2605	0.78	-0.4
2,725,734	-		DVU2605	0.80	-0.2
2,725,763	-		DVU2605	0.86	-0.7
2,725,794	+				-0.6
2,725,847	+				-0.3
2,725,848	-				-0.4
2,725,855	-				-0.4
2,725,884	-				+0.1
2,725,902	-		DVU2606	0.13	-0.1
2,725,974	+		DVU2606	0.37	+0.1
2,726,031	+		DVU2606	0.56	-0.5
2,726,211	-				-1.0
2,726,254	+				-1.7
2,726,286	+				+1.2
2,726,419	+		DVU2607	0.24	+0.2
2,726,419	+		DVU2607	0.24	-0.0
2,726,427	-		DVU2607	0.25	-0.1
2,726,427	-		DVU2607	0.25	+0.6
2,726,614	-		DVU2607	0.55	+0.3
2,726,695	+		DVU2607	0.68	+0.5
2,726,695	+		DVU2607	0.68	-0.2
2,726,715	-		DVU2607	0.71	+0.7
2,726,851	+				+0.1
2,726,873	-				+0.6
2,727,078	-	motA-3	DVU2608	0.20	+0.2
2,727,102	+	motA-3	DVU2608	0.22	-0.6
2,727,155	+	motA-3	DVU2608	0.29	-0.5
2,727,192	+	motA-3	DVU2608	0.33	-0.4
2,727,197	-	motA-3	DVU2608	0.34	+0.4
2,727,200	-	motA-3	DVU2608	0.34	+0.1
2,727,212	-	motA-3	DVU2608	0.35	-0.3
2,727,284	+	motA-3	DVU2608	0.44	-0.3
2,727,284	+	motA-3	DVU2608	0.44	-0.8
2,727,284	+	motA-3	DVU2608	0.44	-0.4
2,727,388	-	motA-3	DVU2608	0.56	-0.6
2,727,407	+	motA-3	DVU2608	0.58	-0.3
2,727,438	-	motA-3	DVU2608	0.62	-0.2
2,727,535	-	motA-3	DVU2608	0.74	+0.4
2,727,620	+	motA-3	DVU2608	0.84	+0.1
2,727,661	+	motA-3	DVU2608	0.88	-0.6
2,727,669	-	motA-3	DVU2608	0.89	+0.0
2,727,684	+				-0.3
2,727,799	+				+0.1
2,727,893	-		DVU2609	0.15	+0.1
2,727,893	-		DVU2609	0.15	+0.4