Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2055
Experiment: Formate/Acetate-Sulfite (10/60-20 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfite (10/60-20 mM) |
|---|---|---|---|---|---|
| remove | |||||
| 2,130,158 | - | +0.0 | |||
| 2,131,021 | + | DVU2054 | 0.55 | +0.4 | |
| 2,131,063 | - | -1.1 | |||
| 2,131,560 | - | metG | DVU2055 | 0.21 | +0.2 |
| 2,133,185 | - | -0.1 | |||
| 2,133,240 | + | -0.3 | |||
| 2,133,291 | - | +0.5 | |||
| 2,133,296 | + | +0.0 | |||
| 2,133,449 | + | -0.5 | |||
| 2,133,514 | - | DVU2057 | 0.10 | +0.2 | |
| 2,133,531 | - | DVU2057 | 0.11 | +0.4 | |
| 2,133,558 | + | DVU2057 | 0.13 | -0.7 | |
| 2,133,609 | + | DVU2057 | 0.17 | -1.2 | |
| 2,133,647 | - | DVU2057 | 0.19 | -0.5 | |
| 2,133,662 | + | DVU2057 | 0.20 | +0.2 | |
| 2,133,734 | + | DVU2057 | 0.25 | -0.4 | |
| 2,133,735 | + | DVU2057 | 0.25 | +0.3 |
Or see this region's nucleotide sequence