Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1193
Experiment: Formate/Acetate-Sulfite (10/60-20 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfite (10/60-20 mM) |
|---|---|---|---|---|---|
| remove | |||||
| 1,283,881 | - | lon | DVU1191 | 0.76 | -0.6 |
| 1,283,904 | + | lon | DVU1191 | 0.77 | -0.5 |
| 1,283,914 | + | lon | DVU1191 | 0.78 | -0.3 |
| 1,283,978 | - | lon | DVU1191 | 0.80 | +0.9 |
| 1,284,088 | - | lon | DVU1191 | 0.84 | +0.1 |
| 1,284,090 | + | lon | DVU1191 | 0.84 | -0.5 |
| 1,284,098 | - | lon | DVU1191 | 0.85 | -1.1 |
| 1,284,119 | - | lon | DVU1191 | 0.86 | -0.5 |
| 1,284,242 | + | -1.0 | |||
| 1,284,250 | - | -0.4 | |||
| 1,284,267 | + | +0.1 | |||
| 1,284,275 | - | -1.3 | |||
| 1,284,449 | + | +1.6 | |||
| 1,284,634 | + | acyP | DVU1192 | 0.49 | -0.1 |
| 1,284,661 | - | acyP | DVU1192 | 0.57 | +0.4 |
| 1,284,709 | + | acyP | DVU1192 | 0.73 | -1.6 |
| 1,284,748 | + | acyP | DVU1192 | 0.86 | -0.0 |
| 1,285,025 | - | radC | DVU1193 | 0.33 | +0.0 |
| 1,285,159 | + | radC | DVU1193 | 0.53 | +0.6 |
| 1,285,271 | + | radC | DVU1193 | 0.70 | -0.2 |
| 1,285,411 | - | -0.2 | |||
| 1,285,516 | - | -0.6 | |||
| 1,285,534 | + | -0.7 | |||
| 1,285,564 | - | -0.1 |
Or see this region's nucleotide sequence