Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_6051 and Pf6N2E2_6052 are separated by 47 nucleotides Pf6N2E2_6052 and Pf6N2E2_6053 are separated by 60 nucleotides
Pf6N2E2_6051 - Transcriptional regulator, LysR family, at 6,869,763 to 6,870,686
_6051
Pf6N2E2_6052 - Hydantoin racemase (EC 5.1.99.-), at 6,870,734 to 6,871,462
_6052
Pf6N2E2_6053 - Hydantoin permease, at 6,871,523 to 6,873,052
_6053
Position (kb)
6870
6871
6872 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6869.864 kb on + strand, within Pf6N2E2_6051 at 6869.865 kb on - strand, within Pf6N2E2_6051 at 6869.900 kb on - strand, within Pf6N2E2_6051 at 6870.078 kb on + strand, within Pf6N2E2_6051 at 6870.078 kb on + strand, within Pf6N2E2_6051 at 6870.078 kb on + strand, within Pf6N2E2_6051 at 6870.078 kb on + strand, within Pf6N2E2_6051 at 6870.078 kb on + strand, within Pf6N2E2_6051 at 6870.078 kb on + strand, within Pf6N2E2_6051 at 6870.078 kb on + strand, within Pf6N2E2_6051 at 6870.078 kb on + strand, within Pf6N2E2_6051 at 6870.078 kb on + strand, within Pf6N2E2_6051 at 6870.079 kb on - strand, within Pf6N2E2_6051 at 6870.079 kb on - strand, within Pf6N2E2_6051 at 6870.079 kb on - strand, within Pf6N2E2_6051 at 6870.079 kb on - strand, within Pf6N2E2_6051 at 6870.079 kb on - strand, within Pf6N2E2_6051 at 6870.079 kb on - strand, within Pf6N2E2_6051 at 6870.079 kb on - strand, within Pf6N2E2_6051 at 6870.079 kb on - strand, within Pf6N2E2_6051 at 6870.079 kb on - strand, within Pf6N2E2_6051 at 6870.157 kb on + strand, within Pf6N2E2_6051 at 6870.553 kb on - strand, within Pf6N2E2_6051 at 6870.553 kb on - strand, within Pf6N2E2_6051 at 6870.579 kb on + strand, within Pf6N2E2_6051 at 6870.579 kb on + strand, within Pf6N2E2_6051 at 6870.579 kb on + strand, within Pf6N2E2_6051 at 6870.579 kb on + strand, within Pf6N2E2_6051 at 6870.579 kb on + strand, within Pf6N2E2_6051 at 6870.579 kb on + strand, within Pf6N2E2_6051 at 6870.580 kb on - strand, within Pf6N2E2_6051 at 6870.580 kb on - strand, within Pf6N2E2_6051 at 6870.580 kb on - strand, within Pf6N2E2_6051 at 6870.582 kb on + strand, within Pf6N2E2_6051 at 6870.583 kb on - strand, within Pf6N2E2_6051 at 6870.790 kb on - strand at 6871.109 kb on - strand, within Pf6N2E2_6052 at 6871.134 kb on + strand, within Pf6N2E2_6052 at 6871.272 kb on + strand, within Pf6N2E2_6052 at 6871.272 kb on + strand, within Pf6N2E2_6052 at 6871.273 kb on - strand, within Pf6N2E2_6052 at 6871.312 kb on - strand, within Pf6N2E2_6052 at 6871.312 kb on - strand, within Pf6N2E2_6052 at 6871.489 kb on + strand at 6871.573 kb on - strand at 6871.681 kb on + strand, within Pf6N2E2_6053 at 6871.682 kb on - strand, within Pf6N2E2_6053 at 6871.749 kb on + strand, within Pf6N2E2_6053 at 6871.749 kb on + strand, within Pf6N2E2_6053 at 6871.750 kb on - strand, within Pf6N2E2_6053 at 6871.750 kb on - strand, within Pf6N2E2_6053 at 6871.750 kb on - strand, within Pf6N2E2_6053 at 6871.750 kb on - strand, within Pf6N2E2_6053 at 6871.750 kb on - strand, within Pf6N2E2_6053 at 6871.773 kb on + strand, within Pf6N2E2_6053 at 6871.875 kb on + strand, within Pf6N2E2_6053 at 6871.875 kb on + strand, within Pf6N2E2_6053 at 6871.875 kb on + strand, within Pf6N2E2_6053 at 6871.876 kb on - strand, within Pf6N2E2_6053 at 6871.876 kb on - strand, within Pf6N2E2_6053 at 6871.876 kb on - strand, within Pf6N2E2_6053 at 6871.876 kb on - strand, within Pf6N2E2_6053 at 6871.876 kb on - strand, within Pf6N2E2_6053 at 6871.899 kb on + strand, within Pf6N2E2_6053 at 6871.899 kb on + strand, within Pf6N2E2_6053 at 6871.968 kb on + strand, within Pf6N2E2_6053 at 6871.968 kb on + strand, within Pf6N2E2_6053 at 6871.968 kb on + strand, within Pf6N2E2_6053 at 6872.280 kb on + strand, within Pf6N2E2_6053 at 6872.314 kb on + strand, within Pf6N2E2_6053 at 6872.315 kb on - strand, within Pf6N2E2_6053 at 6872.315 kb on - strand, within Pf6N2E2_6053 at 6872.315 kb on - strand, within Pf6N2E2_6053 at 6872.385 kb on + strand, within Pf6N2E2_6053 at 6872.385 kb on + strand, within Pf6N2E2_6053 at 6872.385 kb on + strand, within Pf6N2E2_6053 at 6872.385 kb on + strand, within Pf6N2E2_6053 at 6872.385 kb on + strand, within Pf6N2E2_6053 at 6872.385 kb on + strand, within Pf6N2E2_6053 at 6872.385 kb on + strand, within Pf6N2E2_6053 at 6872.385 kb on + strand, within Pf6N2E2_6053 at 6872.385 kb on + strand, within Pf6N2E2_6053 at 6872.385 kb on + strand, within Pf6N2E2_6053 at 6872.386 kb on - strand, within Pf6N2E2_6053 at 6872.386 kb on - strand, within Pf6N2E2_6053 at 6872.386 kb on - strand, within Pf6N2E2_6053 at 6872.386 kb on - strand, within Pf6N2E2_6053 at 6872.386 kb on - strand, within Pf6N2E2_6053 at 6872.386 kb on - strand, within Pf6N2E2_6053 at 6872.386 kb on - strand, within Pf6N2E2_6053 at 6872.386 kb on - strand, within Pf6N2E2_6053 at 6872.386 kb on - strand, within Pf6N2E2_6053 at 6872.386 kb on - strand, within Pf6N2E2_6053
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 6,869,864 + Pf6N2E2_6051 0.11 +0.3 6,869,865 - Pf6N2E2_6051 0.11 +0.5 6,869,900 - Pf6N2E2_6051 0.15 +0.9 6,870,078 + Pf6N2E2_6051 0.34 +0.5 6,870,078 + Pf6N2E2_6051 0.34 +0.2 6,870,078 + Pf6N2E2_6051 0.34 -0.0 6,870,078 + Pf6N2E2_6051 0.34 -2.0 6,870,078 + Pf6N2E2_6051 0.34 +1.2 6,870,078 + Pf6N2E2_6051 0.34 +0.7 6,870,078 + Pf6N2E2_6051 0.34 -1.2 6,870,078 + Pf6N2E2_6051 0.34 +0.2 6,870,078 + Pf6N2E2_6051 0.34 -0.1 6,870,079 - Pf6N2E2_6051 0.34 -0.2 6,870,079 - Pf6N2E2_6051 0.34 +0.5 6,870,079 - Pf6N2E2_6051 0.34 +1.9 6,870,079 - Pf6N2E2_6051 0.34 -1.0 6,870,079 - Pf6N2E2_6051 0.34 -0.9 6,870,079 - Pf6N2E2_6051 0.34 -0.8 6,870,079 - Pf6N2E2_6051 0.34 -0.2 6,870,079 - Pf6N2E2_6051 0.34 +1.1 6,870,079 - Pf6N2E2_6051 0.34 -1.0 6,870,157 + Pf6N2E2_6051 0.43 +1.3 6,870,553 - Pf6N2E2_6051 0.85 -0.6 6,870,553 - Pf6N2E2_6051 0.85 -0.4 6,870,579 + Pf6N2E2_6051 0.88 +0.7 6,870,579 + Pf6N2E2_6051 0.88 +0.6 6,870,579 + Pf6N2E2_6051 0.88 +0.2 6,870,579 + Pf6N2E2_6051 0.88 -0.2 6,870,579 + Pf6N2E2_6051 0.88 +0.4 6,870,579 + Pf6N2E2_6051 0.88 -0.2 6,870,580 - Pf6N2E2_6051 0.88 +1.0 6,870,580 - Pf6N2E2_6051 0.88 +0.8 6,870,580 - Pf6N2E2_6051 0.88 +1.5 6,870,582 + Pf6N2E2_6051 0.89 -1.2 6,870,583 - Pf6N2E2_6051 0.89 +0.1 6,870,790 - -0.7 6,871,109 - Pf6N2E2_6052 0.51 +0.6 6,871,134 + Pf6N2E2_6052 0.55 +1.3 6,871,272 + Pf6N2E2_6052 0.74 +1.2 6,871,272 + Pf6N2E2_6052 0.74 -0.5 6,871,273 - Pf6N2E2_6052 0.74 -0.9 6,871,312 - Pf6N2E2_6052 0.79 +1.8 6,871,312 - Pf6N2E2_6052 0.79 -0.1 6,871,489 + +0.0 6,871,573 - +1.0 6,871,681 + Pf6N2E2_6053 0.10 -1.0 6,871,682 - Pf6N2E2_6053 0.10 -2.4 6,871,749 + Pf6N2E2_6053 0.15 +1.3 6,871,749 + Pf6N2E2_6053 0.15 +0.7 6,871,750 - Pf6N2E2_6053 0.15 +1.9 6,871,750 - Pf6N2E2_6053 0.15 -1.0 6,871,750 - Pf6N2E2_6053 0.15 +1.3 6,871,750 - Pf6N2E2_6053 0.15 +1.0 6,871,750 - Pf6N2E2_6053 0.15 +0.0 6,871,773 + Pf6N2E2_6053 0.16 +1.9 6,871,875 + Pf6N2E2_6053 0.23 -1.2 6,871,875 + Pf6N2E2_6053 0.23 -1.5 6,871,875 + Pf6N2E2_6053 0.23 +0.8 6,871,876 - Pf6N2E2_6053 0.23 +1.9 6,871,876 - Pf6N2E2_6053 0.23 -0.5 6,871,876 - Pf6N2E2_6053 0.23 -2.2 6,871,876 - Pf6N2E2_6053 0.23 +0.7 6,871,876 - Pf6N2E2_6053 0.23 +0.8 6,871,899 + Pf6N2E2_6053 0.25 +0.3 6,871,899 + Pf6N2E2_6053 0.25 +1.3 6,871,968 + Pf6N2E2_6053 0.29 +0.3 6,871,968 + Pf6N2E2_6053 0.29 +0.5 6,871,968 + Pf6N2E2_6053 0.29 +1.4 6,872,280 + Pf6N2E2_6053 0.49 +0.7 6,872,314 + Pf6N2E2_6053 0.52 -1.0 6,872,315 - Pf6N2E2_6053 0.52 -1.8 6,872,315 - Pf6N2E2_6053 0.52 +0.1 6,872,315 - Pf6N2E2_6053 0.52 -0.0 6,872,385 + Pf6N2E2_6053 0.56 +1.8 6,872,385 + Pf6N2E2_6053 0.56 +0.3 6,872,385 + Pf6N2E2_6053 0.56 +1.3 6,872,385 + Pf6N2E2_6053 0.56 -1.4 6,872,385 + Pf6N2E2_6053 0.56 +0.4 6,872,385 + Pf6N2E2_6053 0.56 +1.2 6,872,385 + Pf6N2E2_6053 0.56 -1.7 6,872,385 + Pf6N2E2_6053 0.56 +0.3 6,872,385 + Pf6N2E2_6053 0.56 +0.6 6,872,385 + Pf6N2E2_6053 0.56 +0.3 6,872,386 - Pf6N2E2_6053 0.56 -1.9 6,872,386 - Pf6N2E2_6053 0.56 -0.2 6,872,386 - Pf6N2E2_6053 0.56 +1.1 6,872,386 - Pf6N2E2_6053 0.56 -0.8 6,872,386 - Pf6N2E2_6053 0.56 -0.8 6,872,386 - Pf6N2E2_6053 0.56 -0.9 6,872,386 - Pf6N2E2_6053 0.56 -2.1 6,872,386 - Pf6N2E2_6053 0.56 -0.1 6,872,386 - Pf6N2E2_6053 0.56 +0.5 6,872,386 - Pf6N2E2_6053 0.56 -0.9
Or see this region's nucleotide sequence