Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF115

Experiment: Acanthamoeba sp., muxed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acanthamoeba sp., muxed culture-2
99,693	-				+0.2
100,716	+				-1.5
100,749	-				-1.8
100,866	+				-3.1
101,053	-		GFF115	0.17	-1.5
101,053	-		GFF115	0.17	-0.4
101,379	-		GFF115	0.29	-1.7
101,413	-		GFF115	0.31	-1.4
101,779	-		GFF115	0.45	-0.2
101,842	-		GFF115	0.48	-1.7
102,042	+		GFF115	0.56	-2.1
102,287	-		GFF115	0.66	-1.4
102,394	-		GFF115	0.70	-1.4
103,097	-				-1.5
103,208	-				-1.1
103,314	-				-0.8
103,317	+				-2.0
103,326	-				-0.5
103,344	-				-0.1
103,430	+				+0.6
103,461	+				+0.1
103,469	+				+0.0
103,498	-				+0.3
103,519	-				+0.1
103,545	+				+0.6
103,618	+				-0.4
103,925	-		GFF116	0.19	+0.3