Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1468 and HP15_1469 are separated by 18 nucleotides HP15_1469 and HP15_1470 are separated by 27 nucleotides HP15_1470 and HP15_1471 are separated by 76 nucleotides HP15_1471 and HP15_1472 are separated by 82 nucleotides
HP15_1468: HP15_1468 - flagellar basal-body rod protein FlgC-like protein, at 1,543,023 to 1,543,472
_1468
HP15_1469: HP15_1469 - flagellar hook capping protein, at 1,543,491 to 1,544,168
_1469
HP15_1470: HP15_1470 - flagellar hook protein FlgE, at 1,544,196 to 1,546,094
_1470
HP15_1471: HP15_1471 - flagellar basal-body rod FlgF, at 1,546,171 to 1,546,923
_1471
HP15_1472: HP15_1472 - flagellar basal-body rod protein FlgG, at 1,547,006 to 1,547,794
_1472
Position (kb)
1544
1545
1546
1547 Strain fitness (log2 ratio)
-2
-1
0
1 at 1543.269 kb on - strand, within HP15_1468 at 1543.284 kb on + strand, within HP15_1468 at 1543.304 kb on + strand, within HP15_1468 at 1543.433 kb on + strand at 1543.464 kb on - strand at 1543.578 kb on - strand, within HP15_1469 at 1543.679 kb on + strand, within HP15_1469 at 1543.687 kb on + strand, within HP15_1469 at 1543.687 kb on - strand, within HP15_1469 at 1543.687 kb on - strand, within HP15_1469 at 1543.737 kb on - strand, within HP15_1469 at 1543.739 kb on + strand, within HP15_1469 at 1543.885 kb on - strand, within HP15_1469 at 1544.078 kb on - strand, within HP15_1469 at 1544.088 kb on - strand, within HP15_1469 at 1544.194 kb on - strand at 1544.281 kb on - strand at 1544.281 kb on - strand at 1544.360 kb on - strand at 1544.383 kb on + strand at 1544.395 kb on + strand, within HP15_1470 at 1544.395 kb on + strand, within HP15_1470 at 1544.403 kb on - strand, within HP15_1470 at 1544.403 kb on - strand, within HP15_1470 at 1544.430 kb on + strand, within HP15_1470 at 1544.500 kb on + strand, within HP15_1470 at 1544.562 kb on + strand, within HP15_1470 at 1544.564 kb on + strand, within HP15_1470 at 1544.572 kb on - strand, within HP15_1470 at 1544.670 kb on - strand, within HP15_1470 at 1544.766 kb on - strand, within HP15_1470 at 1545.108 kb on - strand, within HP15_1470 at 1545.111 kb on + strand, within HP15_1470 at 1545.131 kb on - strand, within HP15_1470 at 1545.292 kb on - strand, within HP15_1470 at 1545.366 kb on + strand, within HP15_1470 at 1545.403 kb on + strand, within HP15_1470 at 1545.473 kb on + strand, within HP15_1470 at 1545.479 kb on - strand, within HP15_1470 at 1545.505 kb on - strand, within HP15_1470 at 1545.626 kb on - strand, within HP15_1470 at 1545.687 kb on + strand, within HP15_1470 at 1545.692 kb on - strand, within HP15_1470 at 1545.746 kb on + strand, within HP15_1470 at 1545.746 kb on + strand, within HP15_1470 at 1545.806 kb on + strand, within HP15_1470 at 1545.813 kb on + strand, within HP15_1470 at 1545.956 kb on - strand at 1545.993 kb on + strand at 1546.005 kb on - strand at 1546.073 kb on - strand at 1546.084 kb on + strand at 1546.238 kb on - strand at 1546.290 kb on + strand, within HP15_1471 at 1546.291 kb on + strand, within HP15_1471 at 1546.332 kb on + strand, within HP15_1471 at 1546.383 kb on + strand, within HP15_1471 at 1546.391 kb on - strand, within HP15_1471 at 1546.429 kb on - strand, within HP15_1471 at 1546.572 kb on - strand, within HP15_1471 at 1546.647 kb on + strand, within HP15_1471 at 1546.660 kb on - strand, within HP15_1471 at 1546.670 kb on - strand, within HP15_1471 at 1546.693 kb on + strand, within HP15_1471 at 1546.694 kb on + strand, within HP15_1471 at 1546.701 kb on - strand, within HP15_1471 at 1546.828 kb on - strand, within HP15_1471 at 1546.836 kb on - strand, within HP15_1471 at 1546.925 kb on - strand at 1546.928 kb on + strand at 1546.959 kb on - strand at 1547.010 kb on + strand at 1547.022 kb on + strand at 1547.089 kb on + strand, within HP15_1472
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 1,543,269 - HP15_1468 0.55 -1.6 1,543,284 + HP15_1468 0.58 -1.4 1,543,304 + HP15_1468 0.62 -0.0 1,543,433 + -0.8 1,543,464 - -1.6 1,543,578 - HP15_1469 0.13 -2.6 1,543,679 + HP15_1469 0.28 -1.3 1,543,687 + HP15_1469 0.29 -1.9 1,543,687 - HP15_1469 0.29 -2.1 1,543,687 - HP15_1469 0.29 -0.9 1,543,737 - HP15_1469 0.36 -2.3 1,543,739 + HP15_1469 0.37 -1.3 1,543,885 - HP15_1469 0.58 -1.5 1,544,078 - HP15_1469 0.87 -1.0 1,544,088 - HP15_1469 0.88 -1.4 1,544,194 - -1.1 1,544,281 - -1.4 1,544,281 - -1.6 1,544,360 - -1.3 1,544,383 + -2.6 1,544,395 + HP15_1470 0.10 -1.0 1,544,395 + HP15_1470 0.10 -1.8 1,544,403 - HP15_1470 0.11 -1.5 1,544,403 - HP15_1470 0.11 -0.9 1,544,430 + HP15_1470 0.12 +0.7 1,544,500 + HP15_1470 0.16 -0.6 1,544,562 + HP15_1470 0.19 -2.3 1,544,564 + HP15_1470 0.19 -1.3 1,544,572 - HP15_1470 0.20 -1.5 1,544,670 - HP15_1470 0.25 -1.1 1,544,766 - HP15_1470 0.30 -0.8 1,545,108 - HP15_1470 0.48 -1.7 1,545,111 + HP15_1470 0.48 +0.4 1,545,131 - HP15_1470 0.49 -1.2 1,545,292 - HP15_1470 0.58 -1.0 1,545,366 + HP15_1470 0.62 -1.7 1,545,403 + HP15_1470 0.64 -0.9 1,545,473 + HP15_1470 0.67 -1.0 1,545,479 - HP15_1470 0.68 -1.1 1,545,505 - HP15_1470 0.69 -0.9 1,545,626 - HP15_1470 0.75 -1.4 1,545,687 + HP15_1470 0.79 -0.9 1,545,692 - HP15_1470 0.79 -1.3 1,545,746 + HP15_1470 0.82 -1.8 1,545,746 + HP15_1470 0.82 -0.3 1,545,806 + HP15_1470 0.85 -1.6 1,545,813 + HP15_1470 0.85 -2.2 1,545,956 - -2.4 1,545,993 + -1.3 1,546,005 - -0.1 1,546,073 - -2.6 1,546,084 + -0.7 1,546,238 - -0.0 1,546,290 + HP15_1471 0.16 -1.1 1,546,291 + HP15_1471 0.16 -1.3 1,546,332 + HP15_1471 0.21 -1.4 1,546,383 + HP15_1471 0.28 -1.5 1,546,391 - HP15_1471 0.29 -1.4 1,546,429 - HP15_1471 0.34 -1.0 1,546,572 - HP15_1471 0.53 -1.4 1,546,647 + HP15_1471 0.63 -1.2 1,546,660 - HP15_1471 0.65 -1.7 1,546,670 - HP15_1471 0.66 -1.9 1,546,693 + HP15_1471 0.69 -1.1 1,546,694 + HP15_1471 0.69 -1.1 1,546,701 - HP15_1471 0.70 -1.5 1,546,828 - HP15_1471 0.87 -2.7 1,546,836 - HP15_1471 0.88 -1.3 1,546,925 - -1.2 1,546,928 + -0.3 1,546,959 - -1.2 1,547,010 + -1.5 1,547,022 + -1.5 1,547,089 + HP15_1472 0.11 -2.2
Or see this region's nucleotide sequence