Strain Fitness in Pseudomonas simiae WCS417 around PS417_18560
Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2'-Deoxyinosine 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
4,029,724 | - | -0.5 | |||
4,029,865 | - | +0.1 | |||
4,029,875 | - | -0.9 | |||
4,029,955 | - | -0.7 | |||
4,030,010 | + | PS417_18560 | 0.17 | -1.8 | |
4,030,148 | + | PS417_18560 | 0.39 | -2.3 | |
4,030,148 | + | PS417_18560 | 0.39 | +1.9 | |
4,030,148 | + | PS417_18560 | 0.39 | -2.4 | |
4,030,148 | + | PS417_18560 | 0.39 | +1.0 | |
4,030,149 | - | PS417_18560 | 0.39 | -0.5 | |
4,030,149 | - | PS417_18560 | 0.39 | -1.7 | |
4,030,439 | + | PS417_18560 | 0.85 | -0.8 | |
4,030,439 | + | PS417_18560 | 0.85 | -3.5 | |
4,030,440 | - | PS417_18560 | 0.85 | -2.5 | |
4,030,440 | - | PS417_18560 | 0.85 | -1.7 | |
4,030,440 | - | PS417_18560 | 0.85 | -1.1 | |
4,030,495 | + | -2.3 | |||
4,030,826 | - | PS417_18565 | 0.27 | -0.6 | |
4,031,441 | - | +0.6 | |||
4,031,444 | + | -1.0 | |||
4,031,444 | + | -0.8 | |||
4,031,445 | - | -0.4 | |||
4,031,445 | - | +1.0 | |||
4,031,446 | + | -0.9 |
Or see this region's nucleotide sequence