Strain Fitness in Escherichia coli BL21 around ECD_02621

Experiment: CM1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02620 and ECD_02621 are separated by 634 nucleotidesECD_02621 and ECD_02622 are separated by 317 nucleotides ECD_02620: ECD_02620 - putative kinase, at 2,734,057 to 2,735,535 _02620 ECD_02621: ECD_02621 - hypothetical protein, at 2,736,170 to 2,737,018 _02621 ECD_02622: ECD_02622 - 7-carboxy-7-deazaguanine synthase; queosine biosynthesis, at 2,737,336 to 2,738,007 _02622 Position (kb) 2736 2737 2738Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2735.301 kb on + strand, within ECD_02620at 2735.302 kb on - strand, within ECD_02620at 2735.370 kb on + strand, within ECD_02620at 2735.371 kb on - strand, within ECD_02620at 2735.371 kb on - strand, within ECD_02620at 2735.377 kb on - strand, within ECD_02620at 2735.404 kb on + strandat 2735.448 kb on + strandat 2735.448 kb on + strandat 2735.448 kb on + strandat 2735.448 kb on + strandat 2735.448 kb on + strandat 2735.449 kb on - strandat 2735.449 kb on - strandat 2735.575 kb on - strandat 2735.610 kb on - strandat 2735.610 kb on - strandat 2735.610 kb on - strandat 2735.610 kb on - strandat 2736.167 kb on + strandat 2736.169 kb on + strandat 2736.476 kb on - strand, within ECD_02621at 2736.477 kb on + strand, within ECD_02621at 2736.632 kb on + strand, within ECD_02621at 2736.633 kb on - strand, within ECD_02621at 2736.633 kb on - strand, within ECD_02621at 2736.634 kb on + strand, within ECD_02621at 2736.634 kb on + strand, within ECD_02621at 2736.756 kb on + strand, within ECD_02621at 2736.757 kb on - strand, within ECD_02621at 2736.876 kb on - strand, within ECD_02621at 2736.877 kb on + strand, within ECD_02621at 2737.047 kb on + strandat 2737.324 kb on - strandat 2737.352 kb on + strandat 2737.356 kb on + strandat 2737.356 kb on + strandat 2737.487 kb on - strand, within ECD_02622at 2737.634 kb on - strand, within ECD_02622at 2737.668 kb on + strand, within ECD_02622at 2737.813 kb on - strand, within ECD_02622at 2737.813 kb on - strand, within ECD_02622at 2738.008 kb on - strandat 2738.008 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction CM1
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2,735,301 + ECD_02620 0.84 -0.7
2,735,302 - ECD_02620 0.84 -0.2
2,735,370 + ECD_02620 0.89 -0.3
2,735,371 - ECD_02620 0.89 +3.3
2,735,371 - ECD_02620 0.89 -1.9
2,735,377 - ECD_02620 0.89 -0.7
2,735,404 + -1.1
2,735,448 + +0.3
2,735,448 + -1.7
2,735,448 + -1.5
2,735,448 + -1.3
2,735,448 + -2.5
2,735,449 - -2.2
2,735,449 - -1.0
2,735,575 - -0.9
2,735,610 - +0.2
2,735,610 - -2.1
2,735,610 - -0.0
2,735,610 - +3.6
2,736,167 + -0.6
2,736,169 + -0.5
2,736,476 - ECD_02621 0.36 -0.6
2,736,477 + ECD_02621 0.36 -0.6
2,736,632 + ECD_02621 0.54 -1.4
2,736,633 - ECD_02621 0.55 -1.1
2,736,633 - ECD_02621 0.55 -0.8
2,736,634 + ECD_02621 0.55 +0.2
2,736,634 + ECD_02621 0.55 -2.3
2,736,756 + ECD_02621 0.69 -1.2
2,736,757 - ECD_02621 0.69 +0.4
2,736,876 - ECD_02621 0.83 -2.4
2,736,877 + ECD_02621 0.83 -0.2
2,737,047 + +0.2
2,737,324 - +0.1
2,737,352 + +0.4
2,737,356 + -1.6
2,737,356 + +1.1
2,737,487 - ECD_02622 0.22 -1.2
2,737,634 - ECD_02622 0.44 -0.5
2,737,668 + ECD_02622 0.49 -0.6
2,737,813 - ECD_02622 0.71 -3.3
2,737,813 - ECD_02622 0.71 -0.2
2,738,008 - -1.8
2,738,008 - +4.6

Or see this region's nucleotide sequence