Experiment: N4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00898 and ECD_00899 are separated by 10 nucleotides ECD_00899 and ECD_00900 are separated by 1 nucleotides ECD_00900 and ECD_00901 are separated by 34 nucleotides ECD_00901 and ECD_00902 are separated by 313 nucleotides
ECD_00898: ECD_00898 - dimethyl sulfoxide reductase, anaerobic, subunit A, at 946,050 to 948,494
_00898
ECD_00899: ECD_00899 - dimethyl sulfoxide reductase, anaerobic, subunit B, at 948,505 to 949,122
_00899
ECD_00900: ECD_00900 - dimethyl sulfoxide reductase, anaerobic, subunit C, at 949,124 to 949,987
_00900
ECD_00901: ECD_00901 - putative isochorismatase family hydrolase, at 950,022 to 950,648
_00901
ECD_00902: ECD_00902 - putative MFS transporter, inner membrane protein, at 950,962 to 952,110
_00902
Position (kb) 949
950 Strain fitness (log2 ratio) -2
-1
0
1
2 at 948.154 kb on - strand, within ECD_00898 at 948.177 kb on + strand, within ECD_00898 at 948.410 kb on + strand at 948.415 kb on + strand at 948.464 kb on + strand at 948.689 kb on - strand, within ECD_00899 at 948.705 kb on + strand, within ECD_00899 at 948.870 kb on + strand, within ECD_00899 at 949.182 kb on + strand at 949.310 kb on - strand, within ECD_00900 at 949.753 kb on + strand, within ECD_00900 at 949.790 kb on + strand, within ECD_00900 at 949.860 kb on + strand, within ECD_00900 at 949.985 kb on + strand at 950.111 kb on + strand, within ECD_00901 at 950.493 kb on + strand, within ECD_00901 at 950.675 kb on + strand at 950.675 kb on + strand at 950.676 kb on - strand at 950.718 kb on + strand at 950.730 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction N4 remove 948,154 - ECD_00898 0.86 +0.1 948,177 + ECD_00898 0.87 -1.6 948,410 + +0.0 948,415 + +1.3 948,464 + +1.1 948,689 - ECD_00899 0.30 +0.5 948,705 + ECD_00899 0.32 +1.9 948,870 + ECD_00899 0.59 +0.0 949,182 + +0.1 949,310 - ECD_00900 0.22 +0.1 949,753 + ECD_00900 0.73 -0.4 949,790 + ECD_00900 0.77 -0.7 949,860 + ECD_00900 0.85 -1.0 949,985 + +0.1 950,111 + ECD_00901 0.14 +0.7 950,493 + ECD_00901 0.75 -0.1 950,675 + +0.4 950,675 + -2.3 950,676 - +0.8 950,718 + -0.2 950,730 - -0.1
Or see this region's nucleotide sequence