Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04153

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04152 and MPMX20_04153 are separated by 42 nucleotidesMPMX20_04153 and MPMX20_04154 overlap by 11 nucleotidesMPMX20_04154 and MPMX20_04155 are separated by 9 nucleotides MPMX20_04152: MPMX20_04152 - hypothetical protein, at 4,351,851 to 4,355,651 _04152 MPMX20_04153: MPMX20_04153 - Ribonuclease G, at 4,355,694 to 4,357,163 _04153 MPMX20_04154: MPMX20_04154 - dTTP/UTP pyrophosphatase, at 4,357,153 to 4,357,746 _04154 MPMX20_04155: MPMX20_04155 - Rod shape-determining protein MreD, at 4,357,756 to 4,358,244 _04155 Position (kb) 4355 4356 4357 4358Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4354.698 kb on - strand, within MPMX20_04152at 4354.701 kb on + strand, within MPMX20_04152at 4354.791 kb on - strand, within MPMX20_04152at 4354.859 kb on + strand, within MPMX20_04152at 4354.867 kb on - strand, within MPMX20_04152at 4354.867 kb on - strand, within MPMX20_04152at 4354.896 kb on + strand, within MPMX20_04152at 4354.911 kb on + strand, within MPMX20_04152at 4354.927 kb on - strand, within MPMX20_04152at 4354.958 kb on + strand, within MPMX20_04152at 4355.045 kb on + strand, within MPMX20_04152at 4355.053 kb on - strand, within MPMX20_04152at 4355.068 kb on - strand, within MPMX20_04152at 4355.093 kb on + strand, within MPMX20_04152at 4355.094 kb on - strand, within MPMX20_04152at 4355.112 kb on - strand, within MPMX20_04152at 4355.144 kb on + strand, within MPMX20_04152at 4355.167 kb on - strand, within MPMX20_04152at 4355.171 kb on + strand, within MPMX20_04152at 4355.171 kb on + strand, within MPMX20_04152at 4355.178 kb on + strand, within MPMX20_04152at 4355.179 kb on - strand, within MPMX20_04152at 4355.179 kb on - strand, within MPMX20_04152at 4355.180 kb on + strand, within MPMX20_04152at 4355.195 kb on + strand, within MPMX20_04152at 4355.200 kb on + strand, within MPMX20_04152at 4355.281 kb on + strandat 4355.291 kb on + strandat 4355.368 kb on - strandat 4355.452 kb on - strandat 4355.558 kb on - strandat 4355.589 kb on - strandat 4355.700 kb on - strandat 4355.707 kb on + strandat 4355.725 kb on + strandat 4355.730 kb on - strandat 4355.788 kb on + strandat 4355.812 kb on + strandat 4355.953 kb on + strand, within MPMX20_04153at 4356.001 kb on + strand, within MPMX20_04153at 4356.073 kb on + strand, within MPMX20_04153at 4356.086 kb on + strand, within MPMX20_04153at 4356.101 kb on + strand, within MPMX20_04153at 4356.169 kb on - strand, within MPMX20_04153at 4356.169 kb on - strand, within MPMX20_04153at 4356.193 kb on - strand, within MPMX20_04153at 4356.204 kb on - strand, within MPMX20_04153at 4356.212 kb on + strand, within MPMX20_04153at 4356.364 kb on + strand, within MPMX20_04153at 4356.425 kb on - strand, within MPMX20_04153at 4356.448 kb on - strand, within MPMX20_04153at 4356.523 kb on - strand, within MPMX20_04153at 4356.540 kb on - strand, within MPMX20_04153at 4356.572 kb on + strand, within MPMX20_04153at 4356.592 kb on + strand, within MPMX20_04153at 4356.592 kb on + strand, within MPMX20_04153at 4356.600 kb on - strand, within MPMX20_04153at 4356.600 kb on - strand, within MPMX20_04153at 4356.732 kb on - strand, within MPMX20_04153at 4356.970 kb on + strand, within MPMX20_04153at 4356.978 kb on - strand, within MPMX20_04153at 4356.978 kb on - strand, within MPMX20_04153at 4356.978 kb on - strand, within MPMX20_04153at 4356.980 kb on + strand, within MPMX20_04153at 4357.011 kb on + strand, within MPMX20_04153at 4357.103 kb on + strandat 4357.133 kb on + strandat 4357.146 kb on - strandat 4357.222 kb on - strand, within MPMX20_04154at 4357.260 kb on - strand, within MPMX20_04154at 4357.315 kb on - strand, within MPMX20_04154at 4357.386 kb on + strand, within MPMX20_04154at 4357.404 kb on - strand, within MPMX20_04154at 4357.493 kb on - strand, within MPMX20_04154at 4357.623 kb on - strand, within MPMX20_04154at 4357.665 kb on - strand, within MPMX20_04154at 4357.671 kb on + strand, within MPMX20_04154at 4357.671 kb on + strand, within MPMX20_04154

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,354,698 - MPMX20_04152 0.75 -1.4
4,354,701 + MPMX20_04152 0.75 +1.5
4,354,791 - MPMX20_04152 0.77 +0.5
4,354,859 + MPMX20_04152 0.79 +0.4
4,354,867 - MPMX20_04152 0.79 -0.1
4,354,867 - MPMX20_04152 0.79 -1.3
4,354,896 + MPMX20_04152 0.80 -1.7
4,354,911 + MPMX20_04152 0.81 -1.9
4,354,927 - MPMX20_04152 0.81 -0.8
4,354,958 + MPMX20_04152 0.82 +1.1
4,355,045 + MPMX20_04152 0.84 -2.7
4,355,053 - MPMX20_04152 0.84 -1.5
4,355,068 - MPMX20_04152 0.85 +1.5
4,355,093 + MPMX20_04152 0.85 -2.7
4,355,094 - MPMX20_04152 0.85 -1.2
4,355,112 - MPMX20_04152 0.86 -2.3
4,355,144 + MPMX20_04152 0.87 -1.3
4,355,167 - MPMX20_04152 0.87 -1.1
4,355,171 + MPMX20_04152 0.87 -1.5
4,355,171 + MPMX20_04152 0.87 +1.5
4,355,178 + MPMX20_04152 0.88 +0.5
4,355,179 - MPMX20_04152 0.88 -1.2
4,355,179 - MPMX20_04152 0.88 -0.9
4,355,180 + MPMX20_04152 0.88 +0.5
4,355,195 + MPMX20_04152 0.88 -1.3
4,355,200 + MPMX20_04152 0.88 -0.5
4,355,281 + -0.8
4,355,291 + -0.5
4,355,368 - -0.1
4,355,452 - -0.5
4,355,558 - -0.6
4,355,589 - -0.5
4,355,700 - +0.3
4,355,707 + +0.5
4,355,725 + +1.5
4,355,730 - +1.5
4,355,788 + -2.0
4,355,812 + -1.2
4,355,953 + MPMX20_04153 0.18 -0.2
4,356,001 + MPMX20_04153 0.21 -1.6
4,356,073 + MPMX20_04153 0.26 -2.2
4,356,086 + MPMX20_04153 0.27 -1.8
4,356,101 + MPMX20_04153 0.28 -3.8
4,356,169 - MPMX20_04153 0.32 -0.5
4,356,169 - MPMX20_04153 0.32 +1.1
4,356,193 - MPMX20_04153 0.34 -1.5
4,356,204 - MPMX20_04153 0.35 +0.5
4,356,212 + MPMX20_04153 0.35 -0.7
4,356,364 + MPMX20_04153 0.46 -2.7
4,356,425 - MPMX20_04153 0.50 -0.1
4,356,448 - MPMX20_04153 0.51 -0.4
4,356,523 - MPMX20_04153 0.56 -1.3
4,356,540 - MPMX20_04153 0.58 -0.5
4,356,572 + MPMX20_04153 0.60 +1.3
4,356,592 + MPMX20_04153 0.61 +1.5
4,356,592 + MPMX20_04153 0.61 +2.3
4,356,600 - MPMX20_04153 0.62 -0.5
4,356,600 - MPMX20_04153 0.62 +1.1
4,356,732 - MPMX20_04153 0.71 -1.8
4,356,970 + MPMX20_04153 0.87 -0.6
4,356,978 - MPMX20_04153 0.87 -0.5
4,356,978 - MPMX20_04153 0.87 -2.1
4,356,978 - MPMX20_04153 0.87 -1.9
4,356,980 + MPMX20_04153 0.87 -0.8
4,357,011 + MPMX20_04153 0.90 -0.8
4,357,103 + +0.8
4,357,133 + +0.3
4,357,146 - -1.1
4,357,222 - MPMX20_04154 0.12 -0.2
4,357,260 - MPMX20_04154 0.18 -0.5
4,357,315 - MPMX20_04154 0.27 -0.1
4,357,386 + MPMX20_04154 0.39 +0.4
4,357,404 - MPMX20_04154 0.42 +0.9
4,357,493 - MPMX20_04154 0.57 -0.3
4,357,623 - MPMX20_04154 0.79 -0.3
4,357,665 - MPMX20_04154 0.86 -1.1
4,357,671 + MPMX20_04154 0.87 +0.3
4,357,671 + MPMX20_04154 0.87 -1.2

Or see this region's nucleotide sequence