Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03047

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03046 and MPMX20_03047 are separated by 22 nucleotidesMPMX20_03047 and MPMX20_03048 are separated by 91 nucleotides MPMX20_03046: MPMX20_03046 - hypothetical protein, at 3,185,430 to 3,187,280 _03046 MPMX20_03047: MPMX20_03047 - dCTP deaminase, at 3,187,303 to 3,187,884 _03047 MPMX20_03048: MPMX20_03048 - Uridine kinase, at 3,187,976 to 3,188,617 _03048 Position (kb) 3187 3188Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3186.336 kb on + strand, within MPMX20_03046at 3186.345 kb on + strand, within MPMX20_03046at 3186.353 kb on - strand, within MPMX20_03046at 3186.355 kb on + strand, within MPMX20_03046at 3186.355 kb on + strand, within MPMX20_03046at 3186.355 kb on + strand, within MPMX20_03046at 3186.363 kb on - strand, within MPMX20_03046at 3186.457 kb on - strand, within MPMX20_03046at 3186.473 kb on - strand, within MPMX20_03046at 3186.473 kb on - strand, within MPMX20_03046at 3186.491 kb on - strand, within MPMX20_03046at 3186.500 kb on + strand, within MPMX20_03046at 3186.513 kb on - strand, within MPMX20_03046at 3186.513 kb on - strand, within MPMX20_03046at 3186.556 kb on - strand, within MPMX20_03046at 3186.576 kb on - strand, within MPMX20_03046at 3186.607 kb on - strand, within MPMX20_03046at 3186.638 kb on + strand, within MPMX20_03046at 3186.655 kb on - strand, within MPMX20_03046at 3186.702 kb on + strand, within MPMX20_03046at 3186.703 kb on - strand, within MPMX20_03046at 3186.728 kb on - strand, within MPMX20_03046at 3186.835 kb on - strand, within MPMX20_03046at 3186.925 kb on + strand, within MPMX20_03046at 3186.933 kb on - strand, within MPMX20_03046at 3186.977 kb on - strand, within MPMX20_03046at 3186.979 kb on + strand, within MPMX20_03046at 3186.987 kb on - strand, within MPMX20_03046at 3186.987 kb on - strand, within MPMX20_03046at 3186.989 kb on + strand, within MPMX20_03046at 3187.044 kb on - strand, within MPMX20_03046at 3187.044 kb on - strand, within MPMX20_03046at 3187.044 kb on - strand, within MPMX20_03046at 3187.049 kb on + strand, within MPMX20_03046at 3187.049 kb on + strand, within MPMX20_03046at 3187.049 kb on + strand, within MPMX20_03046at 3187.201 kb on - strandat 3187.215 kb on - strandat 3187.336 kb on - strandat 3187.393 kb on + strand, within MPMX20_03047at 3187.401 kb on + strand, within MPMX20_03047at 3187.409 kb on - strand, within MPMX20_03047at 3187.409 kb on - strand, within MPMX20_03047at 3187.413 kb on - strand, within MPMX20_03047at 3187.460 kb on - strand, within MPMX20_03047at 3187.485 kb on + strand, within MPMX20_03047at 3187.493 kb on - strand, within MPMX20_03047at 3187.495 kb on + strand, within MPMX20_03047at 3187.495 kb on + strand, within MPMX20_03047at 3187.503 kb on - strand, within MPMX20_03047at 3187.573 kb on + strand, within MPMX20_03047at 3187.638 kb on + strand, within MPMX20_03047at 3187.782 kb on + strand, within MPMX20_03047at 3187.790 kb on - strand, within MPMX20_03047at 3187.796 kb on + strand, within MPMX20_03047at 3187.796 kb on + strand, within MPMX20_03047at 3187.814 kb on + strand, within MPMX20_03047at 3187.815 kb on - strand, within MPMX20_03047at 3187.815 kb on - strand, within MPMX20_03047at 3187.834 kb on - strandat 3187.834 kb on - strandat 3187.855 kb on + strandat 3187.863 kb on - strandat 3187.912 kb on + strandat 3187.913 kb on - strandat 3187.913 kb on - strandat 3187.918 kb on + strandat 3187.942 kb on + strandat 3187.947 kb on + strandat 3187.948 kb on + strandat 3187.955 kb on + strandat 3187.956 kb on - strandat 3188.027 kb on + strandat 3188.059 kb on - strand, within MPMX20_03048at 3188.066 kb on - strand, within MPMX20_03048at 3188.114 kb on - strand, within MPMX20_03048at 3188.160 kb on - strand, within MPMX20_03048at 3188.189 kb on + strand, within MPMX20_03048at 3188.227 kb on - strand, within MPMX20_03048at 3188.236 kb on + strand, within MPMX20_03048at 3188.236 kb on + strand, within MPMX20_03048at 3188.236 kb on + strand, within MPMX20_03048at 3188.236 kb on + strand, within MPMX20_03048at 3188.244 kb on - strand, within MPMX20_03048at 3188.244 kb on - strand, within MPMX20_03048at 3188.315 kb on + strand, within MPMX20_03048at 3188.323 kb on - strand, within MPMX20_03048at 3188.323 kb on - strand, within MPMX20_03048at 3188.323 kb on - strand, within MPMX20_03048at 3188.323 kb on - strand, within MPMX20_03048at 3188.328 kb on - strand, within MPMX20_03048at 3188.393 kb on + strand, within MPMX20_03048at 3188.393 kb on + strand, within MPMX20_03048at 3188.393 kb on + strand, within MPMX20_03048at 3188.393 kb on + strand, within MPMX20_03048at 3188.393 kb on + strand, within MPMX20_03048at 3188.393 kb on + strand, within MPMX20_03048at 3188.401 kb on - strand, within MPMX20_03048at 3188.416 kb on + strand, within MPMX20_03048at 3188.456 kb on + strand, within MPMX20_03048at 3188.464 kb on - strand, within MPMX20_03048at 3188.464 kb on - strand, within MPMX20_03048at 3188.464 kb on - strand, within MPMX20_03048at 3188.479 kb on + strand, within MPMX20_03048at 3188.501 kb on - strand, within MPMX20_03048at 3188.513 kb on - strand, within MPMX20_03048at 3188.522 kb on - strand, within MPMX20_03048at 3188.524 kb on + strand, within MPMX20_03048at 3188.524 kb on + strand, within MPMX20_03048at 3188.524 kb on - strand, within MPMX20_03048at 3188.545 kb on + strand, within MPMX20_03048at 3188.599 kb on + strandat 3188.607 kb on - strandat 3188.662 kb on - strandat 3188.662 kb on - strandat 3188.662 kb on - strandat 3188.662 kb on - strandat 3188.667 kb on - strandat 3188.701 kb on + strandat 3188.701 kb on + strandat 3188.701 kb on + strandat 3188.701 kb on + strandat 3188.701 kb on + strandat 3188.727 kb on + strandat 3188.727 kb on + strandat 3188.727 kb on + strandat 3188.727 kb on + strandat 3188.727 kb on + strandat 3188.731 kb on - strandat 3188.735 kb on - strandat 3188.737 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,186,336 + MPMX20_03046 0.49 -1.9
3,186,345 + MPMX20_03046 0.49 -1.9
3,186,353 - MPMX20_03046 0.50 -1.1
3,186,355 + MPMX20_03046 0.50 -1.8
3,186,355 + MPMX20_03046 0.50 -1.1
3,186,355 + MPMX20_03046 0.50 +0.8
3,186,363 - MPMX20_03046 0.50 +0.2
3,186,457 - MPMX20_03046 0.55 -0.6
3,186,473 - MPMX20_03046 0.56 +0.1
3,186,473 - MPMX20_03046 0.56 -1.0
3,186,491 - MPMX20_03046 0.57 -0.4
3,186,500 + MPMX20_03046 0.58 +0.1
3,186,513 - MPMX20_03046 0.59 -0.6
3,186,513 - MPMX20_03046 0.59 -0.0
3,186,556 - MPMX20_03046 0.61 -1.6
3,186,576 - MPMX20_03046 0.62 +0.7
3,186,607 - MPMX20_03046 0.64 -0.6
3,186,638 + MPMX20_03046 0.65 -1.1
3,186,655 - MPMX20_03046 0.66 -0.6
3,186,702 + MPMX20_03046 0.69 -1.2
3,186,703 - MPMX20_03046 0.69 -0.8
3,186,728 - MPMX20_03046 0.70 -1.1
3,186,835 - MPMX20_03046 0.76 -1.9
3,186,925 + MPMX20_03046 0.81 -1.2
3,186,933 - MPMX20_03046 0.81 -3.1
3,186,977 - MPMX20_03046 0.84 -1.0
3,186,979 + MPMX20_03046 0.84 -0.6
3,186,987 - MPMX20_03046 0.84 -0.1
3,186,987 - MPMX20_03046 0.84 +0.4
3,186,989 + MPMX20_03046 0.84 -1.3
3,187,044 - MPMX20_03046 0.87 -1.4
3,187,044 - MPMX20_03046 0.87 -0.6
3,187,044 - MPMX20_03046 0.87 +0.2
3,187,049 + MPMX20_03046 0.87 -2.2
3,187,049 + MPMX20_03046 0.87 -1.6
3,187,049 + MPMX20_03046 0.87 +0.8
3,187,201 - -2.5
3,187,215 - -3.5
3,187,336 - -1.7
3,187,393 + MPMX20_03047 0.15 -0.6
3,187,401 + MPMX20_03047 0.17 -1.8
3,187,409 - MPMX20_03047 0.18 -0.2
3,187,409 - MPMX20_03047 0.18 +1.5
3,187,413 - MPMX20_03047 0.19 -1.6
3,187,460 - MPMX20_03047 0.27 -2.1
3,187,485 + MPMX20_03047 0.31 -1.2
3,187,493 - MPMX20_03047 0.33 -1.2
3,187,495 + MPMX20_03047 0.33 -1.6
3,187,495 + MPMX20_03047 0.33 -0.8
3,187,503 - MPMX20_03047 0.34 -2.4
3,187,573 + MPMX20_03047 0.46 +0.1
3,187,638 + MPMX20_03047 0.58 -1.7
3,187,782 + MPMX20_03047 0.82 -1.7
3,187,790 - MPMX20_03047 0.84 +0.4
3,187,796 + MPMX20_03047 0.85 -1.0
3,187,796 + MPMX20_03047 0.85 +0.5
3,187,814 + MPMX20_03047 0.88 +1.8
3,187,815 - MPMX20_03047 0.88 -1.6
3,187,815 - MPMX20_03047 0.88 -1.6
3,187,834 - -1.2
3,187,834 - -0.8
3,187,855 + +0.8
3,187,863 - +0.8
3,187,912 + -0.6
3,187,913 - -0.3
3,187,913 - +0.7
3,187,918 + -1.2
3,187,942 + -0.2
3,187,947 + +0.8
3,187,948 + -2.0
3,187,955 + -1.8
3,187,956 - +0.2
3,188,027 + +0.3
3,188,059 - MPMX20_03048 0.13 +3.3
3,188,066 - MPMX20_03048 0.14 +2.4
3,188,114 - MPMX20_03048 0.21 +0.2
3,188,160 - MPMX20_03048 0.29 -1.0
3,188,189 + MPMX20_03048 0.33 +2.3
3,188,227 - MPMX20_03048 0.39 -0.8
3,188,236 + MPMX20_03048 0.40 -0.4
3,188,236 + MPMX20_03048 0.40 -1.0
3,188,236 + MPMX20_03048 0.40 +0.1
3,188,236 + MPMX20_03048 0.40 -1.7
3,188,244 - MPMX20_03048 0.42 +1.2
3,188,244 - MPMX20_03048 0.42 +0.8
3,188,315 + MPMX20_03048 0.53 -0.2
3,188,323 - MPMX20_03048 0.54 -1.2
3,188,323 - MPMX20_03048 0.54 -0.8
3,188,323 - MPMX20_03048 0.54 -0.3
3,188,323 - MPMX20_03048 0.54 -0.6
3,188,328 - MPMX20_03048 0.55 +1.8
3,188,393 + MPMX20_03048 0.65 +0.8
3,188,393 + MPMX20_03048 0.65 +0.2
3,188,393 + MPMX20_03048 0.65 -1.4
3,188,393 + MPMX20_03048 0.65 +0.3
3,188,393 + MPMX20_03048 0.65 -0.3
3,188,393 + MPMX20_03048 0.65 -0.6
3,188,401 - MPMX20_03048 0.66 -0.3
3,188,416 + MPMX20_03048 0.69 -0.6
3,188,456 + MPMX20_03048 0.75 -0.2
3,188,464 - MPMX20_03048 0.76 -1.3
3,188,464 - MPMX20_03048 0.76 -0.5
3,188,464 - MPMX20_03048 0.76 -0.8
3,188,479 + MPMX20_03048 0.78 +1.1
3,188,501 - MPMX20_03048 0.82 -0.7
3,188,513 - MPMX20_03048 0.84 -0.6
3,188,522 - MPMX20_03048 0.85 +0.0
3,188,524 + MPMX20_03048 0.85 -0.0
3,188,524 + MPMX20_03048 0.85 +0.8
3,188,524 - MPMX20_03048 0.85 -0.1
3,188,545 + MPMX20_03048 0.89 +0.1
3,188,599 + +0.3
3,188,607 - -0.3
3,188,662 - -1.9
3,188,662 - -0.3
3,188,662 - +0.1
3,188,662 - +0.4
3,188,667 - -0.2
3,188,701 + +0.3
3,188,701 + +1.4
3,188,701 + -0.1
3,188,701 + -1.5
3,188,701 + -2.3
3,188,727 + +0.5
3,188,727 + +0.3
3,188,727 + -0.8
3,188,727 + +0.1
3,188,727 + -2.0
3,188,731 - -0.9
3,188,735 - -0.4
3,188,737 + -0.6

Or see this region's nucleotide sequence