Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02643 and MPMX20_02644 are separated by 274 nucleotides MPMX20_02644 and MPMX20_02645 are separated by 126 nucleotides MPMX20_02645 and MPMX20_02646 are separated by 81 nucleotides
MPMX20_02643: MPMX20_02643 - hypothetical protein, at 2,787,419 to 2,787,694
_02643
MPMX20_02644: MPMX20_02644 - Peptidyl-tRNA hydrolase, at 2,787,969 to 2,788,553
_02644
MPMX20_02645: MPMX20_02645 - Ribosome-binding ATPase YchF, at 2,788,680 to 2,789,774
_02645
MPMX20_02646: MPMX20_02646 - hypothetical protein, at 2,789,856 to 2,790,212
_02646
Position (kb)
2788
2789
2790 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2787.717 kb on - strand at 2787.754 kb on - strand at 2787.801 kb on - strand at 2787.917 kb on + strand at 2788.604 kb on - strand at 2788.723 kb on + strand at 2788.786 kb on + strand at 2788.876 kb on + strand, within MPMX20_02645 at 2788.986 kb on + strand, within MPMX20_02645 at 2789.014 kb on - strand, within MPMX20_02645 at 2789.081 kb on + strand, within MPMX20_02645 at 2789.081 kb on + strand, within MPMX20_02645 at 2789.095 kb on + strand, within MPMX20_02645 at 2789.109 kb on + strand, within MPMX20_02645 at 2789.137 kb on - strand, within MPMX20_02645 at 2789.235 kb on + strand, within MPMX20_02645 at 2789.329 kb on + strand, within MPMX20_02645 at 2789.329 kb on + strand, within MPMX20_02645 at 2789.337 kb on - strand, within MPMX20_02645 at 2789.420 kb on + strand, within MPMX20_02645 at 2789.431 kb on - strand, within MPMX20_02645 at 2789.469 kb on - strand, within MPMX20_02645 at 2789.475 kb on + strand, within MPMX20_02645 at 2789.475 kb on + strand, within MPMX20_02645 at 2789.475 kb on + strand, within MPMX20_02645 at 2789.483 kb on - strand, within MPMX20_02645 at 2789.483 kb on - strand, within MPMX20_02645 at 2789.499 kb on + strand, within MPMX20_02645 at 2789.499 kb on + strand, within MPMX20_02645 at 2789.499 kb on + strand, within MPMX20_02645 at 2789.499 kb on + strand, within MPMX20_02645 at 2789.507 kb on - strand, within MPMX20_02645 at 2789.522 kb on + strand, within MPMX20_02645 at 2789.533 kb on + strand, within MPMX20_02645 at 2789.555 kb on + strand, within MPMX20_02645 at 2789.561 kb on + strand, within MPMX20_02645 at 2789.586 kb on + strand, within MPMX20_02645 at 2789.603 kb on + strand, within MPMX20_02645 at 2789.603 kb on + strand, within MPMX20_02645 at 2789.603 kb on + strand, within MPMX20_02645 at 2789.603 kb on + strand, within MPMX20_02645 at 2789.603 kb on + strand, within MPMX20_02645 at 2789.611 kb on - strand, within MPMX20_02645 at 2789.625 kb on + strand, within MPMX20_02645 at 2789.625 kb on + strand, within MPMX20_02645 at 2789.625 kb on + strand, within MPMX20_02645 at 2789.625 kb on + strand, within MPMX20_02645 at 2789.625 kb on + strand, within MPMX20_02645 at 2789.625 kb on + strand, within MPMX20_02645 at 2789.642 kb on + strand, within MPMX20_02645 at 2789.660 kb on + strand, within MPMX20_02645 at 2789.668 kb on + strand at 2789.668 kb on + strand at 2789.669 kb on + strand at 2789.669 kb on + strand at 2789.669 kb on + strand at 2789.669 kb on + strand at 2789.674 kb on + strand at 2789.674 kb on + strand at 2789.674 kb on + strand at 2789.674 kb on + strand at 2789.674 kb on + strand at 2789.674 kb on + strand at 2789.675 kb on + strand at 2789.675 kb on + strand at 2789.675 kb on + strand at 2789.675 kb on + strand at 2789.676 kb on + strand at 2789.676 kb on + strand at 2789.676 kb on + strand at 2789.676 kb on + strand at 2789.676 kb on + strand at 2789.676 kb on + strand at 2789.676 kb on + strand at 2789.676 kb on + strand at 2789.676 kb on + strand at 2789.676 kb on + strand at 2789.698 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.700 kb on + strand at 2789.891 kb on + strand at 2789.891 kb on + strand at 2789.891 kb on + strand at 2789.891 kb on + strand at 2789.891 kb on + strand at 2789.899 kb on - strand, within MPMX20_02646 at 2789.931 kb on - strand, within MPMX20_02646 at 2789.931 kb on - strand, within MPMX20_02646 at 2789.979 kb on - strand, within MPMX20_02646 at 2790.451 kb on - strand at 2790.482 kb on - strand at 2790.511 kb on - strand at 2790.528 kb on - strand at 2790.547 kb on - strand at 2790.597 kb on - strand at 2790.601 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.602 kb on - strand at 2790.607 kb on - strand at 2790.618 kb on - strand at 2790.656 kb on - strand at 2790.672 kb on - strand at 2790.680 kb on - strand at 2790.680 kb on - strand at 2790.686 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.688 kb on - strand at 2790.692 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.693 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.698 kb on - strand at 2790.703 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.712 kb on - strand at 2790.717 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.718 kb on - strand at 2790.719 kb on - strand at 2790.734 kb on - strand at 2790.735 kb on - strand at 2790.735 kb on - strand at 2790.740 kb on - strand at 2790.750 kb on - strand at 2790.758 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,787,717 - +0.1 2,787,754 - -1.4 2,787,801 - +0.6 2,787,917 + -0.7 2,788,604 - -0.3 2,788,723 + -1.5 2,788,786 + -2.4 2,788,876 + MPMX20_02645 0.18 -0.1 2,788,986 + MPMX20_02645 0.28 -0.1 2,789,014 - MPMX20_02645 0.31 +0.4 2,789,081 + MPMX20_02645 0.37 +1.9 2,789,081 + MPMX20_02645 0.37 -0.4 2,789,095 + MPMX20_02645 0.38 -1.5 2,789,109 + MPMX20_02645 0.39 -0.1 2,789,137 - MPMX20_02645 0.42 -0.6 2,789,235 + MPMX20_02645 0.51 -0.6 2,789,329 + MPMX20_02645 0.59 -0.4 2,789,329 + MPMX20_02645 0.59 +0.4 2,789,337 - MPMX20_02645 0.60 +0.1 2,789,420 + MPMX20_02645 0.68 +0.9 2,789,431 - MPMX20_02645 0.69 -0.6 2,789,469 - MPMX20_02645 0.72 +1.5 2,789,475 + MPMX20_02645 0.73 -0.1 2,789,475 + MPMX20_02645 0.73 +0.9 2,789,475 + MPMX20_02645 0.73 +1.6 2,789,483 - MPMX20_02645 0.73 +0.4 2,789,483 - MPMX20_02645 0.73 -1.1 2,789,499 + MPMX20_02645 0.75 -0.6 2,789,499 + MPMX20_02645 0.75 -0.1 2,789,499 + MPMX20_02645 0.75 -0.1 2,789,499 + MPMX20_02645 0.75 +0.4 2,789,507 - MPMX20_02645 0.76 +0.4 2,789,522 + MPMX20_02645 0.77 -0.6 2,789,533 + MPMX20_02645 0.78 -0.4 2,789,555 + MPMX20_02645 0.80 -2.1 2,789,561 + MPMX20_02645 0.80 -1.1 2,789,586 + MPMX20_02645 0.83 -0.6 2,789,603 + MPMX20_02645 0.84 +0.9 2,789,603 + MPMX20_02645 0.84 -1.9 2,789,603 + MPMX20_02645 0.84 -0.4 2,789,603 + MPMX20_02645 0.84 -0.6 2,789,603 + MPMX20_02645 0.84 -1.6 2,789,611 - MPMX20_02645 0.85 -0.4 2,789,625 + MPMX20_02645 0.86 -0.4 2,789,625 + MPMX20_02645 0.86 -0.4 2,789,625 + MPMX20_02645 0.86 +0.6 2,789,625 + MPMX20_02645 0.86 -0.9 2,789,625 + MPMX20_02645 0.86 -0.6 2,789,625 + MPMX20_02645 0.86 -0.4 2,789,642 + MPMX20_02645 0.88 +2.9 2,789,660 + MPMX20_02645 0.89 +0.4 2,789,668 + -0.6 2,789,668 + -0.9 2,789,669 + -0.4 2,789,669 + -0.6 2,789,669 + +1.9 2,789,669 + +0.4 2,789,674 + +1.9 2,789,674 + -0.4 2,789,674 + +0.9 2,789,674 + +1.9 2,789,674 + -1.1 2,789,674 + -0.4 2,789,675 + -1.2 2,789,675 + +0.5 2,789,675 + -1.6 2,789,675 + +0.4 2,789,676 + -0.4 2,789,676 + +1.4 2,789,676 + +1.9 2,789,676 + -0.6 2,789,676 + +0.4 2,789,676 + -1.4 2,789,676 + -1.1 2,789,676 + +0.4 2,789,676 + -0.9 2,789,676 + -1.2 2,789,698 + -0.8 2,789,700 + -1.5 2,789,700 + +0.4 2,789,700 + -1.2 2,789,700 + +0.9 2,789,700 + -1.2 2,789,700 + -0.9 2,789,700 + -0.2 2,789,700 + -2.0 2,789,700 + -0.1 2,789,700 + +0.6 2,789,700 + +1.0 2,789,700 + -1.2 2,789,700 + -0.1 2,789,700 + -2.6 2,789,700 + +0.4 2,789,700 + -1.6 2,789,700 + -2.8 2,789,700 + -1.1 2,789,700 + -0.6 2,789,700 + -0.6 2,789,700 + -0.6 2,789,700 + -0.6 2,789,700 + -0.1 2,789,700 + -0.9 2,789,700 + +1.9 2,789,700 + +0.5 2,789,700 + -0.8 2,789,700 + -0.6 2,789,700 + -2.1 2,789,700 + +0.9 2,789,891 + -0.5 2,789,891 + -0.2 2,789,891 + -1.1 2,789,891 + -0.4 2,789,891 + +1.9 2,789,899 - MPMX20_02646 0.12 -0.6 2,789,931 - MPMX20_02646 0.21 -1.6 2,789,931 - MPMX20_02646 0.21 -1.1 2,789,979 - MPMX20_02646 0.34 +0.4 2,790,451 - -0.1 2,790,482 - -0.6 2,790,511 - -0.4 2,790,528 - -0.9 2,790,547 - +0.9 2,790,597 - -1.9 2,790,601 - +1.4 2,790,602 - -0.4 2,790,602 - -0.4 2,790,602 - -0.9 2,790,602 - +0.2 2,790,602 - -1.6 2,790,602 - -0.9 2,790,602 - -0.5 2,790,607 - +0.9 2,790,618 - -0.0 2,790,656 - -0.3 2,790,672 - -0.2 2,790,680 - -0.6 2,790,680 - +1.0 2,790,686 - +0.8 2,790,688 - +2.5 2,790,688 - +0.4 2,790,688 - +0.9 2,790,688 - -0.6 2,790,688 - -0.4 2,790,688 - -0.2 2,790,688 - +0.5 2,790,688 - +0.2 2,790,688 - -0.6 2,790,688 - -0.6 2,790,688 - -2.1 2,790,688 - +2.4 2,790,688 - -1.4 2,790,688 - -1.1 2,790,688 - -2.1 2,790,688 - -2.7 2,790,688 - +0.2 2,790,688 - -1.6 2,790,692 - +0.5 2,790,693 - -0.6 2,790,693 - +0.7 2,790,693 - +0.4 2,790,693 - -1.3 2,790,693 - +1.2 2,790,693 - +0.9 2,790,693 - -0.4 2,790,693 - -0.9 2,790,693 - +0.1 2,790,693 - -0.1 2,790,693 - -0.2 2,790,693 - -2.0 2,790,693 - -2.1 2,790,693 - -0.6 2,790,693 - +0.9 2,790,698 - -0.9 2,790,698 - -1.8 2,790,698 - +0.2 2,790,698 - -1.2 2,790,698 - -1.1 2,790,698 - +1.9 2,790,698 - +0.9 2,790,698 - +0.1 2,790,698 - +0.1 2,790,698 - +0.9 2,790,698 - -2.4 2,790,698 - +0.8 2,790,698 - -0.4 2,790,698 - +1.8 2,790,698 - +0.6 2,790,698 - +0.4 2,790,698 - +0.4 2,790,698 - +0.1 2,790,698 - +0.2 2,790,698 - +1.5 2,790,698 - +0.0 2,790,698 - +0.4 2,790,698 - -1.0 2,790,698 - -0.1 2,790,698 - +0.9 2,790,698 - -0.4 2,790,698 - -0.2 2,790,698 - -0.2 2,790,698 - +0.9 2,790,698 - +0.6 2,790,698 - -0.6 2,790,698 - -0.6 2,790,698 - +0.2 2,790,698 - -0.6 2,790,698 - +0.4 2,790,698 - +0.9 2,790,698 - -0.3 2,790,698 - +0.4 2,790,698 - -0.1 2,790,698 - -0.4 2,790,698 - -0.2 2,790,698 - -0.6 2,790,698 - +0.2 2,790,698 - +0.9 2,790,698 - +0.0 2,790,698 - +1.9 2,790,698 - -1.2 2,790,698 - -1.4 2,790,703 - +0.7 2,790,712 - -1.2 2,790,712 - +0.7 2,790,712 - -1.1 2,790,712 - -0.6 2,790,712 - +1.7 2,790,712 - +1.5 2,790,712 - +1.9 2,790,717 - -0.1 2,790,718 - -1.8 2,790,718 - -0.9 2,790,718 - -0.5 2,790,718 - -0.6 2,790,718 - -0.8 2,790,718 - -0.2 2,790,718 - +1.9 2,790,718 - +1.1 2,790,718 - -0.8 2,790,718 - -0.1 2,790,718 - -0.4 2,790,718 - +0.9 2,790,718 - +0.9 2,790,718 - -0.6 2,790,718 - -1.8 2,790,719 - -1.4 2,790,734 - -0.3 2,790,735 - -0.7 2,790,735 - -1.4 2,790,740 - +2.9 2,790,750 - +0.4 2,790,758 - -0.1
Or see this region's nucleotide sequence