Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01973 and MPMX20_01974 are separated by 237 nucleotides MPMX20_01974 and MPMX20_01975 are separated by 28 nucleotides MPMX20_01975 and MPMX20_01976 are separated by 299 nucleotides
MPMX20_01973: MPMX20_01973 - Multidrug resistance protein MdtK, at 2,063,952 to 2,065,313
_01973
MPMX20_01974: MPMX20_01974 - Riboflavin synthase, at 2,065,551 to 2,066,192
_01974
MPMX20_01975: MPMX20_01975 - Cyclopropane-fatty-acyl-phospholipid synthase, at 2,066,221 to 2,067,369
_01975
MPMX20_01976: MPMX20_01976 - Inner membrane transport protein YdhC, at 2,067,669 to 2,068,868
_01976
Position (kb)
2066
2067
2068 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 2065.228 kb on - strand at 2065.234 kb on + strand at 2065.269 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.277 kb on - strand at 2065.284 kb on - strand at 2065.284 kb on - strand at 2065.284 kb on - strand at 2065.289 kb on - strand at 2065.333 kb on + strand at 2065.371 kb on + strand at 2065.478 kb on + strand at 2066.126 kb on + strand, within MPMX20_01974 at 2066.126 kb on + strand, within MPMX20_01974 at 2066.134 kb on - strand at 2066.134 kb on - strand at 2066.136 kb on + strand at 2066.252 kb on - strand at 2066.252 kb on - strand at 2066.257 kb on + strand at 2066.265 kb on - strand at 2066.277 kb on + strand at 2066.300 kb on - strand at 2066.304 kb on - strand at 2066.336 kb on + strand, within MPMX20_01975 at 2066.336 kb on + strand, within MPMX20_01975 at 2066.336 kb on + strand, within MPMX20_01975 at 2066.351 kb on + strand, within MPMX20_01975 at 2066.351 kb on + strand, within MPMX20_01975 at 2066.359 kb on - strand, within MPMX20_01975 at 2066.359 kb on - strand, within MPMX20_01975 at 2066.359 kb on - strand, within MPMX20_01975 at 2066.359 kb on - strand, within MPMX20_01975 at 2066.359 kb on - strand, within MPMX20_01975 at 2066.359 kb on - strand, within MPMX20_01975 at 2066.359 kb on - strand, within MPMX20_01975 at 2066.359 kb on - strand, within MPMX20_01975 at 2066.380 kb on - strand, within MPMX20_01975 at 2066.381 kb on + strand, within MPMX20_01975 at 2066.398 kb on - strand, within MPMX20_01975 at 2066.411 kb on - strand, within MPMX20_01975 at 2066.416 kb on + strand, within MPMX20_01975 at 2066.416 kb on + strand, within MPMX20_01975 at 2066.416 kb on + strand, within MPMX20_01975 at 2066.416 kb on + strand, within MPMX20_01975 at 2066.416 kb on + strand, within MPMX20_01975 at 2066.416 kb on + strand, within MPMX20_01975 at 2066.416 kb on + strand, within MPMX20_01975 at 2066.416 kb on + strand, within MPMX20_01975 at 2066.424 kb on - strand, within MPMX20_01975 at 2066.424 kb on - strand, within MPMX20_01975 at 2066.424 kb on - strand, within MPMX20_01975 at 2066.424 kb on - strand, within MPMX20_01975 at 2066.424 kb on - strand, within MPMX20_01975 at 2066.424 kb on - strand, within MPMX20_01975 at 2066.424 kb on - strand, within MPMX20_01975 at 2066.463 kb on + strand, within MPMX20_01975 at 2066.465 kb on + strand, within MPMX20_01975 at 2066.465 kb on + strand, within MPMX20_01975 at 2066.496 kb on + strand, within MPMX20_01975 at 2066.504 kb on - strand, within MPMX20_01975 at 2066.556 kb on + strand, within MPMX20_01975 at 2066.562 kb on + strand, within MPMX20_01975 at 2066.564 kb on - strand, within MPMX20_01975 at 2066.564 kb on - strand, within MPMX20_01975 at 2066.570 kb on - strand, within MPMX20_01975 at 2066.570 kb on - strand, within MPMX20_01975 at 2066.572 kb on - strand, within MPMX20_01975 at 2066.585 kb on - strand, within MPMX20_01975 at 2066.608 kb on - strand, within MPMX20_01975 at 2066.610 kb on + strand, within MPMX20_01975 at 2066.618 kb on - strand, within MPMX20_01975 at 2066.691 kb on + strand, within MPMX20_01975 at 2066.702 kb on + strand, within MPMX20_01975 at 2066.710 kb on - strand, within MPMX20_01975 at 2066.801 kb on + strand, within MPMX20_01975 at 2066.801 kb on + strand, within MPMX20_01975 at 2066.801 kb on + strand, within MPMX20_01975 at 2066.809 kb on - strand, within MPMX20_01975 at 2066.809 kb on - strand, within MPMX20_01975 at 2066.837 kb on - strand, within MPMX20_01975 at 2066.838 kb on + strand, within MPMX20_01975 at 2066.846 kb on - strand, within MPMX20_01975 at 2066.879 kb on - strand, within MPMX20_01975 at 2066.904 kb on + strand, within MPMX20_01975 at 2066.928 kb on + strand, within MPMX20_01975 at 2066.929 kb on + strand, within MPMX20_01975 at 2066.938 kb on - strand, within MPMX20_01975 at 2066.948 kb on - strand, within MPMX20_01975 at 2066.979 kb on + strand, within MPMX20_01975 at 2066.984 kb on + strand, within MPMX20_01975 at 2066.984 kb on + strand, within MPMX20_01975 at 2066.992 kb on - strand, within MPMX20_01975 at 2066.994 kb on + strand, within MPMX20_01975 at 2066.994 kb on + strand, within MPMX20_01975 at 2066.994 kb on - strand, within MPMX20_01975 at 2067.002 kb on - strand, within MPMX20_01975 at 2067.002 kb on - strand, within MPMX20_01975 at 2067.168 kb on + strand, within MPMX20_01975 at 2067.168 kb on + strand, within MPMX20_01975 at 2067.176 kb on - strand, within MPMX20_01975 at 2067.192 kb on + strand, within MPMX20_01975 at 2067.198 kb on + strand, within MPMX20_01975 at 2067.198 kb on + strand, within MPMX20_01975 at 2067.198 kb on + strand, within MPMX20_01975 at 2067.250 kb on - strand, within MPMX20_01975 at 2067.281 kb on - strand at 2067.295 kb on + strand at 2067.295 kb on + strand at 2067.295 kb on + strand at 2067.295 kb on + strand at 2067.303 kb on - strand at 2067.303 kb on - strand at 2067.323 kb on - strand at 2067.331 kb on - strand at 2067.372 kb on - strand at 2067.372 kb on - strand at 2067.372 kb on - strand at 2067.382 kb on + strand at 2067.390 kb on - strand at 2067.392 kb on + strand at 2067.400 kb on + strand at 2067.400 kb on + strand at 2067.400 kb on + strand at 2067.400 kb on + strand at 2067.408 kb on - strand at 2067.408 kb on - strand at 2067.418 kb on - strand at 2067.455 kb on - strand at 2067.473 kb on + strand at 2067.473 kb on + strand at 2067.478 kb on + strand at 2067.478 kb on + strand at 2067.478 kb on + strand at 2067.481 kb on - strand at 2067.483 kb on + strand at 2067.483 kb on + strand at 2067.483 kb on + strand at 2067.486 kb on - strand at 2067.491 kb on - strand at 2067.583 kb on + strand at 2067.682 kb on + strand at 2067.718 kb on + strand at 2067.752 kb on + strand at 2067.765 kb on - strand at 2067.781 kb on - strand at 2067.819 kb on - strand, within MPMX20_01976 at 2067.823 kb on - strand, within MPMX20_01976 at 2067.823 kb on - strand, within MPMX20_01976 at 2067.834 kb on + strand, within MPMX20_01976 at 2067.842 kb on - strand, within MPMX20_01976 at 2067.855 kb on + strand, within MPMX20_01976 at 2067.885 kb on - strand, within MPMX20_01976 at 2067.903 kb on + strand, within MPMX20_01976 at 2067.906 kb on - strand, within MPMX20_01976 at 2067.911 kb on - strand, within MPMX20_01976 at 2068.011 kb on + strand, within MPMX20_01976 at 2068.012 kb on - strand, within MPMX20_01976 at 2068.018 kb on + strand, within MPMX20_01976 at 2068.145 kb on - strand, within MPMX20_01976 at 2068.145 kb on - strand, within MPMX20_01976 at 2068.233 kb on + strand, within MPMX20_01976 at 2068.236 kb on - strand, within MPMX20_01976 at 2068.269 kb on - strand, within MPMX20_01976 at 2068.275 kb on + strand, within MPMX20_01976 at 2068.327 kb on - strand, within MPMX20_01976 at 2068.348 kb on + strand, within MPMX20_01976
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,065,228 - -0.4 2,065,234 + -1.1 2,065,269 + -0.1 2,065,276 + -1.3 2,065,276 + +1.3 2,065,276 + -0.5 2,065,276 + -1.1 2,065,276 + +0.0 2,065,276 + -1.7 2,065,276 + -0.7 2,065,276 + +0.5 2,065,276 + -0.5 2,065,276 + -0.6 2,065,277 - -0.7 2,065,284 - -0.1 2,065,284 - -0.4 2,065,284 - +1.1 2,065,289 - +0.6 2,065,333 + -2.0 2,065,371 + +0.3 2,065,478 + +0.1 2,066,126 + MPMX20_01974 0.90 +0.1 2,066,126 + MPMX20_01974 0.90 +0.3 2,066,134 - +0.6 2,066,134 - +0.3 2,066,136 + -1.7 2,066,252 - -1.0 2,066,252 - -0.6 2,066,257 + -0.1 2,066,265 - -2.0 2,066,277 + -0.9 2,066,300 - -1.6 2,066,304 - -1.4 2,066,336 + MPMX20_01975 0.10 -1.7 2,066,336 + MPMX20_01975 0.10 -2.7 2,066,336 + MPMX20_01975 0.10 +1.3 2,066,351 + MPMX20_01975 0.11 +0.0 2,066,351 + MPMX20_01975 0.11 -1.8 2,066,359 - MPMX20_01975 0.12 -1.7 2,066,359 - MPMX20_01975 0.12 -1.9 2,066,359 - MPMX20_01975 0.12 -1.0 2,066,359 - MPMX20_01975 0.12 -1.7 2,066,359 - MPMX20_01975 0.12 -2.0 2,066,359 - MPMX20_01975 0.12 -0.4 2,066,359 - MPMX20_01975 0.12 -1.0 2,066,359 - MPMX20_01975 0.12 -2.2 2,066,380 - MPMX20_01975 0.14 +0.4 2,066,381 + MPMX20_01975 0.14 -1.7 2,066,398 - MPMX20_01975 0.15 -5.0 2,066,411 - MPMX20_01975 0.17 -1.6 2,066,416 + MPMX20_01975 0.17 -0.5 2,066,416 + MPMX20_01975 0.17 +0.1 2,066,416 + MPMX20_01975 0.17 -0.8 2,066,416 + MPMX20_01975 0.17 -0.3 2,066,416 + MPMX20_01975 0.17 -2.7 2,066,416 + MPMX20_01975 0.17 -1.2 2,066,416 + MPMX20_01975 0.17 -3.6 2,066,416 + MPMX20_01975 0.17 -0.1 2,066,424 - MPMX20_01975 0.18 -1.4 2,066,424 - MPMX20_01975 0.18 -2.0 2,066,424 - MPMX20_01975 0.18 -1.5 2,066,424 - MPMX20_01975 0.18 -1.2 2,066,424 - MPMX20_01975 0.18 -1.6 2,066,424 - MPMX20_01975 0.18 -1.3 2,066,424 - MPMX20_01975 0.18 -1.3 2,066,463 + MPMX20_01975 0.21 -1.8 2,066,465 + MPMX20_01975 0.21 -1.4 2,066,465 + MPMX20_01975 0.21 -1.3 2,066,496 + MPMX20_01975 0.24 -0.7 2,066,504 - MPMX20_01975 0.25 -0.7 2,066,556 + MPMX20_01975 0.29 -1.3 2,066,562 + MPMX20_01975 0.30 -1.5 2,066,564 - MPMX20_01975 0.30 -2.0 2,066,564 - MPMX20_01975 0.30 -2.0 2,066,570 - MPMX20_01975 0.30 -3.3 2,066,570 - MPMX20_01975 0.30 -2.4 2,066,572 - MPMX20_01975 0.31 +0.3 2,066,585 - MPMX20_01975 0.32 -0.9 2,066,608 - MPMX20_01975 0.34 -1.8 2,066,610 + MPMX20_01975 0.34 -2.2 2,066,618 - MPMX20_01975 0.35 -1.4 2,066,691 + MPMX20_01975 0.41 -2.8 2,066,702 + MPMX20_01975 0.42 -1.8 2,066,710 - MPMX20_01975 0.43 -2.3 2,066,801 + MPMX20_01975 0.50 -1.9 2,066,801 + MPMX20_01975 0.50 -2.8 2,066,801 + MPMX20_01975 0.50 -1.9 2,066,809 - MPMX20_01975 0.51 -2.6 2,066,809 - MPMX20_01975 0.51 -0.2 2,066,837 - MPMX20_01975 0.54 -1.6 2,066,838 + MPMX20_01975 0.54 -0.7 2,066,846 - MPMX20_01975 0.54 +0.4 2,066,879 - MPMX20_01975 0.57 -0.6 2,066,904 + MPMX20_01975 0.59 -1.4 2,066,928 + MPMX20_01975 0.62 -0.9 2,066,929 + MPMX20_01975 0.62 -1.4 2,066,938 - MPMX20_01975 0.62 -0.5 2,066,948 - MPMX20_01975 0.63 -2.2 2,066,979 + MPMX20_01975 0.66 -1.2 2,066,984 + MPMX20_01975 0.66 -2.0 2,066,984 + MPMX20_01975 0.66 -0.7 2,066,992 - MPMX20_01975 0.67 -1.3 2,066,994 + MPMX20_01975 0.67 -1.5 2,066,994 + MPMX20_01975 0.67 -1.4 2,066,994 - MPMX20_01975 0.67 -0.5 2,067,002 - MPMX20_01975 0.68 -2.5 2,067,002 - MPMX20_01975 0.68 -0.9 2,067,168 + MPMX20_01975 0.82 +0.3 2,067,168 + MPMX20_01975 0.82 -2.4 2,067,176 - MPMX20_01975 0.83 -2.0 2,067,192 + MPMX20_01975 0.85 -2.3 2,067,198 + MPMX20_01975 0.85 -2.0 2,067,198 + MPMX20_01975 0.85 -1.0 2,067,198 + MPMX20_01975 0.85 -0.7 2,067,250 - MPMX20_01975 0.90 -1.3 2,067,281 - -1.9 2,067,295 + -0.6 2,067,295 + -1.6 2,067,295 + -0.1 2,067,295 + -0.7 2,067,303 - -0.9 2,067,303 - -1.8 2,067,323 - -1.4 2,067,331 - -0.8 2,067,372 - -2.0 2,067,372 - -1.7 2,067,372 - -1.9 2,067,382 + -1.5 2,067,390 - -0.9 2,067,392 + +3.3 2,067,400 + -1.1 2,067,400 + -2.8 2,067,400 + -1.5 2,067,400 + -1.3 2,067,408 - -1.8 2,067,408 - +0.3 2,067,418 - -2.4 2,067,455 - +0.7 2,067,473 + -0.7 2,067,473 + -0.4 2,067,478 + +0.5 2,067,478 + -0.5 2,067,478 + -2.9 2,067,481 - -0.1 2,067,483 + -1.4 2,067,483 + -1.7 2,067,483 + -1.6 2,067,486 - +0.2 2,067,491 - +0.0 2,067,583 + +0.1 2,067,682 + -0.5 2,067,718 + -0.7 2,067,752 + -1.1 2,067,765 - -0.6 2,067,781 - +2.2 2,067,819 - MPMX20_01976 0.12 -0.7 2,067,823 - MPMX20_01976 0.13 -2.6 2,067,823 - MPMX20_01976 0.13 +1.5 2,067,834 + MPMX20_01976 0.14 -0.5 2,067,842 - MPMX20_01976 0.14 -3.3 2,067,855 + MPMX20_01976 0.15 -1.4 2,067,885 - MPMX20_01976 0.18 -0.1 2,067,903 + MPMX20_01976 0.20 -0.1 2,067,906 - MPMX20_01976 0.20 +0.2 2,067,911 - MPMX20_01976 0.20 +0.1 2,068,011 + MPMX20_01976 0.28 +0.9 2,068,012 - MPMX20_01976 0.29 +0.3 2,068,018 + MPMX20_01976 0.29 -1.9 2,068,145 - MPMX20_01976 0.40 -0.0 2,068,145 - MPMX20_01976 0.40 -0.9 2,068,233 + MPMX20_01976 0.47 -0.4 2,068,236 - MPMX20_01976 0.47 -0.7 2,068,269 - MPMX20_01976 0.50 +0.3 2,068,275 + MPMX20_01976 0.51 +1.9 2,068,327 - MPMX20_01976 0.55 -0.4 2,068,348 + MPMX20_01976 0.57 -0.9
Or see this region's nucleotide sequence