Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01368 and MPMX20_01369 are separated by 130 nucleotides MPMX20_01369 and MPMX20_01370 are separated by 35 nucleotides MPMX20_01370 and MPMX20_01371 are separated by 9 nucleotides
MPMX20_01368: MPMX20_01368 - hypothetical protein, at 1,434,453 to 1,435,742
_01368
MPMX20_01369: MPMX20_01369 - Tol-Pal system protein TolB, at 1,435,873 to 1,437,165
_01369
MPMX20_01370: MPMX20_01370 - Peptidoglycan-associated lipoprotein, at 1,437,201 to 1,437,722
_01370
MPMX20_01371: MPMX20_01371 - Cell division coordinator CpoB, at 1,437,732 to 1,438,526
_01371
Position (kb)
1435
1436
1437
1438 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1434.912 kb on + strand, within MPMX20_01368 at 1434.985 kb on - strand, within MPMX20_01368 at 1435.161 kb on + strand, within MPMX20_01368 at 1435.370 kb on - strand, within MPMX20_01368 at 1435.450 kb on - strand, within MPMX20_01368 at 1435.518 kb on + strand, within MPMX20_01368 at 1435.620 kb on - strand at 1435.620 kb on - strand at 1435.620 kb on - strand at 1435.627 kb on + strand at 1435.655 kb on - strand at 1435.655 kb on - strand at 1435.655 kb on - strand at 1435.747 kb on - strand at 1435.775 kb on + strand at 1435.851 kb on - strand at 1435.851 kb on - strand at 1435.977 kb on + strand at 1436.058 kb on + strand, within MPMX20_01369 at 1436.181 kb on + strand, within MPMX20_01369 at 1436.181 kb on + strand, within MPMX20_01369 at 1436.181 kb on + strand, within MPMX20_01369 at 1436.189 kb on - strand, within MPMX20_01369 at 1436.189 kb on - strand, within MPMX20_01369 at 1436.308 kb on - strand, within MPMX20_01369 at 1436.353 kb on + strand, within MPMX20_01369 at 1436.388 kb on + strand, within MPMX20_01369 at 1436.388 kb on + strand, within MPMX20_01369 at 1436.391 kb on - strand, within MPMX20_01369 at 1436.396 kb on - strand, within MPMX20_01369 at 1436.411 kb on - strand, within MPMX20_01369 at 1436.426 kb on - strand, within MPMX20_01369 at 1436.456 kb on - strand, within MPMX20_01369 at 1436.478 kb on + strand, within MPMX20_01369 at 1436.490 kb on - strand, within MPMX20_01369 at 1436.504 kb on + strand, within MPMX20_01369 at 1436.504 kb on + strand, within MPMX20_01369 at 1436.504 kb on + strand, within MPMX20_01369 at 1436.504 kb on + strand, within MPMX20_01369 at 1436.504 kb on + strand, within MPMX20_01369 at 1436.512 kb on - strand, within MPMX20_01369 at 1436.512 kb on - strand, within MPMX20_01369 at 1436.545 kb on + strand, within MPMX20_01369 at 1436.610 kb on - strand, within MPMX20_01369 at 1436.658 kb on + strand, within MPMX20_01369 at 1436.666 kb on - strand, within MPMX20_01369 at 1436.680 kb on - strand, within MPMX20_01369 at 1436.839 kb on + strand, within MPMX20_01369 at 1436.862 kb on - strand, within MPMX20_01369 at 1436.892 kb on - strand, within MPMX20_01369 at 1436.921 kb on + strand, within MPMX20_01369 at 1437.042 kb on - strand at 1437.048 kb on - strand at 1437.050 kb on + strand at 1437.065 kb on + strand at 1437.130 kb on - strand at 1437.140 kb on - strand at 1437.140 kb on - strand at 1437.311 kb on + strand, within MPMX20_01370 at 1437.314 kb on - strand, within MPMX20_01370 at 1437.410 kb on + strand, within MPMX20_01370 at 1437.442 kb on + strand, within MPMX20_01370 at 1437.538 kb on + strand, within MPMX20_01370 at 1437.602 kb on + strand, within MPMX20_01370 at 1437.626 kb on + strand, within MPMX20_01370 at 1437.663 kb on + strand, within MPMX20_01370 at 1437.776 kb on + strand at 1437.820 kb on - strand, within MPMX20_01371 at 1437.883 kb on + strand, within MPMX20_01371 at 1438.030 kb on - strand, within MPMX20_01371 at 1438.033 kb on - strand, within MPMX20_01371 at 1438.135 kb on + strand, within MPMX20_01371 at 1438.148 kb on - strand, within MPMX20_01371
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,434,912 + MPMX20_01368 0.36 -1.7 1,434,985 - MPMX20_01368 0.41 -3.1 1,435,161 + MPMX20_01368 0.55 -2.0 1,435,370 - MPMX20_01368 0.71 -2.8 1,435,450 - MPMX20_01368 0.77 +1.7 1,435,518 + MPMX20_01368 0.83 -0.3 1,435,620 - -1.1 1,435,620 - -1.8 1,435,620 - -0.8 1,435,627 + -2.8 1,435,655 - -1.6 1,435,655 - -1.1 1,435,655 - +0.2 1,435,747 - +2.1 1,435,775 + -1.1 1,435,851 - -3.8 1,435,851 - -1.6 1,435,977 + -2.0 1,436,058 + MPMX20_01369 0.14 -0.3 1,436,181 + MPMX20_01369 0.24 -1.3 1,436,181 + MPMX20_01369 0.24 -0.3 1,436,181 + MPMX20_01369 0.24 -1.3 1,436,189 - MPMX20_01369 0.24 -1.7 1,436,189 - MPMX20_01369 0.24 -3.1 1,436,308 - MPMX20_01369 0.34 -1.3 1,436,353 + MPMX20_01369 0.37 -2.8 1,436,388 + MPMX20_01369 0.40 -3.1 1,436,388 + MPMX20_01369 0.40 +0.2 1,436,391 - MPMX20_01369 0.40 -0.3 1,436,396 - MPMX20_01369 0.40 -1.4 1,436,411 - MPMX20_01369 0.42 -0.8 1,436,426 - MPMX20_01369 0.43 -1.4 1,436,456 - MPMX20_01369 0.45 -1.3 1,436,478 + MPMX20_01369 0.47 +0.2 1,436,490 - MPMX20_01369 0.48 -1.3 1,436,504 + MPMX20_01369 0.49 -3.0 1,436,504 + MPMX20_01369 0.49 -1.1 1,436,504 + MPMX20_01369 0.49 -1.8 1,436,504 + MPMX20_01369 0.49 -1.4 1,436,504 + MPMX20_01369 0.49 -1.3 1,436,512 - MPMX20_01369 0.49 +0.2 1,436,512 - MPMX20_01369 0.49 -2.3 1,436,545 + MPMX20_01369 0.52 +0.2 1,436,610 - MPMX20_01369 0.57 -1.1 1,436,658 + MPMX20_01369 0.61 -1.4 1,436,666 - MPMX20_01369 0.61 -3.0 1,436,680 - MPMX20_01369 0.62 -3.6 1,436,839 + MPMX20_01369 0.75 -0.8 1,436,862 - MPMX20_01369 0.76 -2.8 1,436,892 - MPMX20_01369 0.79 -0.3 1,436,921 + MPMX20_01369 0.81 -2.1 1,437,042 - -1.7 1,437,048 - -1.1 1,437,050 + +0.7 1,437,065 + -2.5 1,437,130 - +0.2 1,437,140 - +0.2 1,437,140 - -3.3 1,437,311 + MPMX20_01370 0.21 -0.8 1,437,314 - MPMX20_01370 0.22 -2.4 1,437,410 + MPMX20_01370 0.40 -0.3 1,437,442 + MPMX20_01370 0.46 -2.3 1,437,538 + MPMX20_01370 0.65 -1.6 1,437,602 + MPMX20_01370 0.77 +0.7 1,437,626 + MPMX20_01370 0.81 -3.1 1,437,663 + MPMX20_01370 0.89 -1.3 1,437,776 + -0.8 1,437,820 - MPMX20_01371 0.11 -1.5 1,437,883 + MPMX20_01371 0.19 +1.1 1,438,030 - MPMX20_01371 0.37 -1.7 1,438,033 - MPMX20_01371 0.38 -0.7 1,438,135 + MPMX20_01371 0.51 -0.5 1,438,148 - MPMX20_01371 0.52 +1.1
Or see this region's nucleotide sequence