Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01356 and MPMX20_01357 overlap by 1 nucleotides MPMX20_01357 and MPMX20_01358 are separated by 83 nucleotides MPMX20_01358 and MPMX20_01359 are separated by 169 nucleotides
MPMX20_01356: MPMX20_01356 - Succinate--CoA ligase [ADP-forming] subunit beta, at 1,421,351 to 1,422,517
_01356
MPMX20_01357: MPMX20_01357 - Succinate--CoA ligase [ADP-forming] subunit alpha, at 1,422,517 to 1,423,386
_01357
MPMX20_01358: MPMX20_01358 - Mannosyl-D-glycerate transport/metabolism system repressor MngR, at 1,423,470 to 1,424,186
_01358
MPMX20_01359: MPMX20_01359 - PTS system 2-O-alpha-mannosyl-D-glycerate-specific EIIABC component, at 1,424,356 to 1,426,272
_01359
Position (kb)
1422
1423
1424 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1421.526 kb on + strand, within MPMX20_01356 at 1421.526 kb on + strand, within MPMX20_01356 at 1421.534 kb on - strand, within MPMX20_01356 at 1421.693 kb on - strand, within MPMX20_01356 at 1421.769 kb on + strand, within MPMX20_01356 at 1421.935 kb on + strand, within MPMX20_01356 at 1421.961 kb on - strand, within MPMX20_01356 at 1421.966 kb on - strand, within MPMX20_01356 at 1422.009 kb on + strand, within MPMX20_01356 at 1422.063 kb on - strand, within MPMX20_01356 at 1422.094 kb on - strand, within MPMX20_01356 at 1422.095 kb on + strand, within MPMX20_01356 at 1422.100 kb on + strand, within MPMX20_01356 at 1422.113 kb on - strand, within MPMX20_01356 at 1422.149 kb on + strand, within MPMX20_01356 at 1422.149 kb on + strand, within MPMX20_01356 at 1422.174 kb on + strand, within MPMX20_01356 at 1422.174 kb on + strand, within MPMX20_01356 at 1422.184 kb on + strand, within MPMX20_01356 at 1422.222 kb on - strand, within MPMX20_01356 at 1422.230 kb on + strand, within MPMX20_01356 at 1422.238 kb on - strand, within MPMX20_01356 at 1422.280 kb on + strand, within MPMX20_01356 at 1422.280 kb on + strand, within MPMX20_01356 at 1422.280 kb on + strand, within MPMX20_01356 at 1422.288 kb on - strand, within MPMX20_01356 at 1422.375 kb on + strand, within MPMX20_01356 at 1422.409 kb on - strand at 1422.416 kb on - strand at 1422.506 kb on - strand at 1422.540 kb on + strand at 1422.561 kb on - strand at 1422.675 kb on + strand, within MPMX20_01357 at 1422.675 kb on + strand, within MPMX20_01357 at 1422.695 kb on + strand, within MPMX20_01357 at 1422.800 kb on - strand, within MPMX20_01357 at 1422.800 kb on - strand, within MPMX20_01357 at 1422.857 kb on + strand, within MPMX20_01357 at 1422.885 kb on - strand, within MPMX20_01357 at 1422.902 kb on + strand, within MPMX20_01357 at 1422.910 kb on - strand, within MPMX20_01357 at 1423.116 kb on + strand, within MPMX20_01357 at 1423.253 kb on - strand, within MPMX20_01357 at 1423.292 kb on - strand, within MPMX20_01357 at 1423.391 kb on + strand at 1423.403 kb on + strand at 1423.409 kb on - strand at 1423.521 kb on - strand at 1423.630 kb on - strand, within MPMX20_01358 at 1423.630 kb on - strand, within MPMX20_01358 at 1423.721 kb on + strand, within MPMX20_01358 at 1423.731 kb on - strand, within MPMX20_01358 at 1423.733 kb on + strand, within MPMX20_01358 at 1423.875 kb on - strand, within MPMX20_01358 at 1423.904 kb on - strand, within MPMX20_01358 at 1423.997 kb on + strand, within MPMX20_01358 at 1424.066 kb on + strand, within MPMX20_01358 at 1424.066 kb on + strand, within MPMX20_01358 at 1424.190 kb on - strand at 1424.376 kb on - strand at 1424.376 kb on - strand at 1424.376 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,421,526 + MPMX20_01356 0.15 -1.4 1,421,526 + MPMX20_01356 0.15 -1.1 1,421,534 - MPMX20_01356 0.16 -0.9 1,421,693 - MPMX20_01356 0.29 -0.6 1,421,769 + MPMX20_01356 0.36 -0.3 1,421,935 + MPMX20_01356 0.50 -3.2 1,421,961 - MPMX20_01356 0.52 -0.0 1,421,966 - MPMX20_01356 0.53 -1.4 1,422,009 + MPMX20_01356 0.56 -1.7 1,422,063 - MPMX20_01356 0.61 -2.4 1,422,094 - MPMX20_01356 0.64 -2.1 1,422,095 + MPMX20_01356 0.64 -2.2 1,422,100 + MPMX20_01356 0.64 -0.9 1,422,113 - MPMX20_01356 0.65 -1.6 1,422,149 + MPMX20_01356 0.68 -1.8 1,422,149 + MPMX20_01356 0.68 -1.5 1,422,174 + MPMX20_01356 0.71 +0.1 1,422,174 + MPMX20_01356 0.71 -0.5 1,422,184 + MPMX20_01356 0.71 -1.7 1,422,222 - MPMX20_01356 0.75 -1.0 1,422,230 + MPMX20_01356 0.75 -1.1 1,422,238 - MPMX20_01356 0.76 -1.3 1,422,280 + MPMX20_01356 0.80 -2.3 1,422,280 + MPMX20_01356 0.80 -2.2 1,422,280 + MPMX20_01356 0.80 -0.7 1,422,288 - MPMX20_01356 0.80 +3.9 1,422,375 + MPMX20_01356 0.88 -0.9 1,422,409 - -0.3 1,422,416 - -0.4 1,422,506 - +1.7 1,422,540 + +0.1 1,422,561 - -0.3 1,422,675 + MPMX20_01357 0.18 -1.4 1,422,675 + MPMX20_01357 0.18 -0.7 1,422,695 + MPMX20_01357 0.20 -1.1 1,422,800 - MPMX20_01357 0.33 -2.4 1,422,800 - MPMX20_01357 0.33 -0.8 1,422,857 + MPMX20_01357 0.39 -3.6 1,422,885 - MPMX20_01357 0.42 -1.4 1,422,902 + MPMX20_01357 0.44 -1.3 1,422,910 - MPMX20_01357 0.45 +0.3 1,423,116 + MPMX20_01357 0.69 -0.7 1,423,253 - MPMX20_01357 0.85 -0.7 1,423,292 - MPMX20_01357 0.89 -1.2 1,423,391 + -0.9 1,423,403 + -1.3 1,423,409 - -0.4 1,423,521 - +0.2 1,423,630 - MPMX20_01358 0.22 +0.9 1,423,630 - MPMX20_01358 0.22 -0.4 1,423,721 + MPMX20_01358 0.35 +0.4 1,423,731 - MPMX20_01358 0.36 -1.0 1,423,733 + MPMX20_01358 0.37 -1.1 1,423,875 - MPMX20_01358 0.56 -0.8 1,423,904 - MPMX20_01358 0.61 -0.1 1,423,997 + MPMX20_01358 0.74 +0.9 1,424,066 + MPMX20_01358 0.83 +1.1 1,424,066 + MPMX20_01358 0.83 +3.1 1,424,190 - -0.3 1,424,376 - -1.1 1,424,376 - +1.3 1,424,376 - -1.5
Or see this region's nucleotide sequence