Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01334

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01332 and MPMX20_01333 are separated by 183 nucleotidesMPMX20_01333 and MPMX20_01334 are separated by 24 nucleotidesMPMX20_01334 and MPMX20_01335 are separated by 70 nucleotides MPMX20_01332: MPMX20_01332 - Esterase YbfF, at 1,390,320 to 1,391,093 _01332 MPMX20_01333: MPMX20_01333 - Negative modulator of initiation of replication, at 1,391,277 to 1,391,825 _01333 MPMX20_01334: MPMX20_01334 - Phosphoglucomutase, at 1,391,850 to 1,393,490 _01334 MPMX20_01335: MPMX20_01335 - Putrescine transporter PotE, at 1,393,561 to 1,394,874 _01335 Position (kb) 1391 1392 1393 1394Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 1390.994 kb on + strand, within MPMX20_01332at 1390.994 kb on + strand, within MPMX20_01332at 1390.994 kb on + strand, within MPMX20_01332at 1391.002 kb on - strand, within MPMX20_01332at 1391.007 kb on - strand, within MPMX20_01332at 1391.013 kb on + strand, within MPMX20_01332at 1391.122 kb on - strandat 1391.126 kb on + strandat 1391.127 kb on + strandat 1391.127 kb on + strandat 1391.129 kb on - strandat 1391.129 kb on - strandat 1391.163 kb on + strandat 1391.163 kb on - strandat 1391.171 kb on - strandat 1391.171 kb on - strandat 1391.171 kb on - strandat 1391.196 kb on + strandat 1391.204 kb on - strandat 1391.269 kb on + strandat 1391.284 kb on - strandat 1391.304 kb on + strandat 1391.312 kb on + strandat 1391.320 kb on - strandat 1391.337 kb on + strand, within MPMX20_01333at 1391.337 kb on + strand, within MPMX20_01333at 1391.445 kb on - strand, within MPMX20_01333at 1391.515 kb on - strand, within MPMX20_01333at 1391.624 kb on - strand, within MPMX20_01333at 1391.631 kb on - strand, within MPMX20_01333at 1391.631 kb on - strand, within MPMX20_01333at 1391.631 kb on - strand, within MPMX20_01333at 1391.646 kb on + strand, within MPMX20_01333at 1391.661 kb on - strand, within MPMX20_01333at 1391.711 kb on + strand, within MPMX20_01333at 1391.719 kb on - strand, within MPMX20_01333at 1391.755 kb on + strand, within MPMX20_01333at 1391.765 kb on + strand, within MPMX20_01333at 1391.765 kb on - strand, within MPMX20_01333at 1391.819 kb on + strandat 1391.820 kb on + strandat 1391.854 kb on - strandat 1391.871 kb on + strandat 1391.874 kb on - strandat 1391.875 kb on + strandat 1391.879 kb on - strandat 1391.924 kb on + strandat 1391.924 kb on + strandat 1391.932 kb on - strandat 1391.932 kb on - strandat 1391.951 kb on - strandat 1391.980 kb on + strandat 1391.980 kb on + strandat 1391.980 kb on + strandat 1391.988 kb on - strandat 1391.988 kb on - strandat 1392.042 kb on + strand, within MPMX20_01334at 1392.042 kb on + strand, within MPMX20_01334at 1392.052 kb on + strand, within MPMX20_01334at 1392.109 kb on + strand, within MPMX20_01334at 1392.117 kb on - strand, within MPMX20_01334at 1392.127 kb on - strand, within MPMX20_01334at 1392.174 kb on - strand, within MPMX20_01334at 1392.340 kb on - strand, within MPMX20_01334at 1392.374 kb on - strand, within MPMX20_01334at 1392.394 kb on + strand, within MPMX20_01334at 1392.409 kb on + strand, within MPMX20_01334at 1392.489 kb on + strand, within MPMX20_01334at 1392.497 kb on - strand, within MPMX20_01334at 1392.497 kb on - strand, within MPMX20_01334at 1392.634 kb on - strand, within MPMX20_01334at 1392.644 kb on - strand, within MPMX20_01334at 1392.644 kb on - strand, within MPMX20_01334at 1392.644 kb on - strand, within MPMX20_01334at 1392.644 kb on - strand, within MPMX20_01334at 1392.691 kb on + strand, within MPMX20_01334at 1392.773 kb on - strand, within MPMX20_01334at 1392.798 kb on + strand, within MPMX20_01334at 1392.801 kb on - strand, within MPMX20_01334at 1392.806 kb on - strand, within MPMX20_01334at 1392.901 kb on + strand, within MPMX20_01334at 1392.945 kb on - strand, within MPMX20_01334at 1392.947 kb on + strand, within MPMX20_01334at 1392.947 kb on + strand, within MPMX20_01334at 1393.180 kb on + strand, within MPMX20_01334at 1393.180 kb on + strand, within MPMX20_01334at 1393.229 kb on + strand, within MPMX20_01334at 1393.229 kb on + strand, within MPMX20_01334at 1393.237 kb on - strand, within MPMX20_01334at 1393.238 kb on - strand, within MPMX20_01334at 1393.248 kb on - strand, within MPMX20_01334at 1393.251 kb on + strand, within MPMX20_01334at 1393.255 kb on + strand, within MPMX20_01334at 1393.258 kb on - strand, within MPMX20_01334at 1393.412 kb on - strandat 1393.420 kb on + strandat 1393.533 kb on + strandat 1393.534 kb on + strandat 1393.534 kb on + strandat 1393.534 kb on + strandat 1393.534 kb on + strandat 1393.534 kb on + strandat 1393.534 kb on + strandat 1393.541 kb on - strandat 1393.542 kb on - strandat 1393.604 kb on - strandat 1393.614 kb on - strandat 1393.627 kb on + strandat 1393.640 kb on + strandat 1393.702 kb on - strand, within MPMX20_01335at 1393.734 kb on - strand, within MPMX20_01335at 1393.788 kb on - strand, within MPMX20_01335at 1393.837 kb on - strand, within MPMX20_01335at 1393.837 kb on - strand, within MPMX20_01335at 1393.862 kb on - strand, within MPMX20_01335at 1393.869 kb on + strand, within MPMX20_01335at 1393.906 kb on + strand, within MPMX20_01335at 1393.914 kb on - strand, within MPMX20_01335at 1393.914 kb on - strand, within MPMX20_01335at 1393.928 kb on - strand, within MPMX20_01335at 1393.954 kb on + strand, within MPMX20_01335at 1393.992 kb on - strand, within MPMX20_01335at 1394.016 kb on - strand, within MPMX20_01335at 1394.089 kb on + strand, within MPMX20_01335at 1394.102 kb on - strand, within MPMX20_01335at 1394.195 kb on - strand, within MPMX20_01335at 1394.197 kb on + strand, within MPMX20_01335at 1394.228 kb on - strand, within MPMX20_01335at 1394.335 kb on - strand, within MPMX20_01335at 1394.337 kb on - strand, within MPMX20_01335at 1394.363 kb on - strand, within MPMX20_01335at 1394.363 kb on - strand, within MPMX20_01335at 1394.363 kb on - strand, within MPMX20_01335at 1394.368 kb on - strand, within MPMX20_01335at 1394.381 kb on + strand, within MPMX20_01335at 1394.394 kb on - strand, within MPMX20_01335at 1394.423 kb on - strand, within MPMX20_01335at 1394.429 kb on + strand, within MPMX20_01335at 1394.429 kb on + strand, within MPMX20_01335at 1394.429 kb on - strand, within MPMX20_01335at 1394.447 kb on - strand, within MPMX20_01335at 1394.482 kb on - strand, within MPMX20_01335

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,390,994 + MPMX20_01332 0.87 +0.7
1,390,994 + MPMX20_01332 0.87 +0.7
1,390,994 + MPMX20_01332 0.87 +0.7
1,391,002 - MPMX20_01332 0.88 +0.9
1,391,007 - MPMX20_01332 0.89 -1.9
1,391,013 + MPMX20_01332 0.90 -1.0
1,391,122 - +1.1
1,391,126 + +1.7
1,391,127 + -0.4
1,391,127 + +0.1
1,391,129 - -0.9
1,391,129 - -0.5
1,391,163 + -0.1
1,391,163 - +1.3
1,391,171 - +0.7
1,391,171 - +1.7
1,391,171 - -0.7
1,391,196 + -1.3
1,391,204 - +0.2
1,391,269 + -0.0
1,391,284 - +0.1
1,391,304 + -0.3
1,391,312 + +0.3
1,391,320 - -0.6
1,391,337 + MPMX20_01333 0.11 +0.9
1,391,337 + MPMX20_01333 0.11 +0.4
1,391,445 - MPMX20_01333 0.31 -0.6
1,391,515 - MPMX20_01333 0.43 -2.3
1,391,624 - MPMX20_01333 0.63 +0.7
1,391,631 - MPMX20_01333 0.64 +0.4
1,391,631 - MPMX20_01333 0.64 +0.1
1,391,631 - MPMX20_01333 0.64 -1.1
1,391,646 + MPMX20_01333 0.67 -2.7
1,391,661 - MPMX20_01333 0.70 -0.4
1,391,711 + MPMX20_01333 0.79 -1.5
1,391,719 - MPMX20_01333 0.81 -0.6
1,391,755 + MPMX20_01333 0.87 -1.5
1,391,765 + MPMX20_01333 0.89 +1.7
1,391,765 - MPMX20_01333 0.89 -1.2
1,391,819 + -1.7
1,391,820 + -0.7
1,391,854 - -5.1
1,391,871 + -3.8
1,391,874 - -4.0
1,391,875 + -2.9
1,391,879 - -2.8
1,391,924 + -3.2
1,391,924 + -2.4
1,391,932 - -2.3
1,391,932 - -1.1
1,391,951 - +1.7
1,391,980 + -2.7
1,391,980 + -2.7
1,391,980 + -2.9
1,391,988 - -4.3
1,391,988 - -4.4
1,392,042 + MPMX20_01334 0.12 -4.3
1,392,042 + MPMX20_01334 0.12 -3.4
1,392,052 + MPMX20_01334 0.12 -2.1
1,392,109 + MPMX20_01334 0.16 -2.5
1,392,117 - MPMX20_01334 0.16 -3.1
1,392,127 - MPMX20_01334 0.17 -4.5
1,392,174 - MPMX20_01334 0.20 -3.3
1,392,340 - MPMX20_01334 0.30 -2.2
1,392,374 - MPMX20_01334 0.32 -0.6
1,392,394 + MPMX20_01334 0.33 -0.7
1,392,409 + MPMX20_01334 0.34 -5.0
1,392,489 + MPMX20_01334 0.39 -5.1
1,392,497 - MPMX20_01334 0.39 -2.0
1,392,497 - MPMX20_01334 0.39 -4.3
1,392,634 - MPMX20_01334 0.48 -4.6
1,392,644 - MPMX20_01334 0.48 -3.8
1,392,644 - MPMX20_01334 0.48 -2.7
1,392,644 - MPMX20_01334 0.48 -2.7
1,392,644 - MPMX20_01334 0.48 -5.6
1,392,691 + MPMX20_01334 0.51 -1.9
1,392,773 - MPMX20_01334 0.56 -2.7
1,392,798 + MPMX20_01334 0.58 -1.1
1,392,801 - MPMX20_01334 0.58 -3.1
1,392,806 - MPMX20_01334 0.58 -0.3
1,392,901 + MPMX20_01334 0.64 -2.5
1,392,945 - MPMX20_01334 0.67 -3.6
1,392,947 + MPMX20_01334 0.67 -3.6
1,392,947 + MPMX20_01334 0.67 -1.7
1,393,180 + MPMX20_01334 0.81 -3.7
1,393,180 + MPMX20_01334 0.81 -4.1
1,393,229 + MPMX20_01334 0.84 -3.1
1,393,229 + MPMX20_01334 0.84 -2.0
1,393,237 - MPMX20_01334 0.85 -3.9
1,393,238 - MPMX20_01334 0.85 -2.7
1,393,248 - MPMX20_01334 0.85 -3.7
1,393,251 + MPMX20_01334 0.85 -3.1
1,393,255 + MPMX20_01334 0.86 -2.6
1,393,258 - MPMX20_01334 0.86 -2.6
1,393,412 - -5.1
1,393,420 + -4.2
1,393,533 + -1.5
1,393,534 + -1.2
1,393,534 + -0.7
1,393,534 + +1.7
1,393,534 + -0.7
1,393,534 + +1.7
1,393,534 + -0.6
1,393,541 - +0.5
1,393,542 - -1.9
1,393,604 - -1.5
1,393,614 - +1.2
1,393,627 + +0.1
1,393,640 + +0.9
1,393,702 - MPMX20_01335 0.11 +0.2
1,393,734 - MPMX20_01335 0.13 -0.9
1,393,788 - MPMX20_01335 0.17 -0.1
1,393,837 - MPMX20_01335 0.21 +1.3
1,393,837 - MPMX20_01335 0.21 -0.1
1,393,862 - MPMX20_01335 0.23 -0.8
1,393,869 + MPMX20_01335 0.23 +0.5
1,393,906 + MPMX20_01335 0.26 -1.5
1,393,914 - MPMX20_01335 0.27 -0.9
1,393,914 - MPMX20_01335 0.27 -1.1
1,393,928 - MPMX20_01335 0.28 +0.2
1,393,954 + MPMX20_01335 0.30 -0.2
1,393,992 - MPMX20_01335 0.33 -0.3
1,394,016 - MPMX20_01335 0.35 -1.6
1,394,089 + MPMX20_01335 0.40 +0.3
1,394,102 - MPMX20_01335 0.41 -0.0
1,394,195 - MPMX20_01335 0.48 -2.0
1,394,197 + MPMX20_01335 0.48 -0.3
1,394,228 - MPMX20_01335 0.51 +0.5
1,394,335 - MPMX20_01335 0.59 -0.5
1,394,337 - MPMX20_01335 0.59 +1.9
1,394,363 - MPMX20_01335 0.61 +0.1
1,394,363 - MPMX20_01335 0.61 +0.1
1,394,363 - MPMX20_01335 0.61 -2.5
1,394,368 - MPMX20_01335 0.61 +0.3
1,394,381 + MPMX20_01335 0.62 +0.5
1,394,394 - MPMX20_01335 0.63 -1.2
1,394,423 - MPMX20_01335 0.66 +0.5
1,394,429 + MPMX20_01335 0.66 +2.5
1,394,429 + MPMX20_01335 0.66 -1.6
1,394,429 - MPMX20_01335 0.66 -0.1
1,394,447 - MPMX20_01335 0.67 +1.3
1,394,482 - MPMX20_01335 0.70 -0.3

Or see this region's nucleotide sequence