Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00997 and MPMX20_00998 are separated by 22 nucleotides MPMX20_00998 and MPMX20_00999 are separated by 60 nucleotides
MPMX20_00997: MPMX20_00997 - Queuine tRNA-ribosyltransferase, at 1,051,238 to 1,052,365
_00997
MPMX20_00998: MPMX20_00998 - Sec translocon accessory complex subunit YajC, at 1,052,388 to 1,052,720
_00998
MPMX20_00999: MPMX20_00999 - Protein translocase subunit SecD, at 1,052,781 to 1,054,595
_00999
Position (kb)
1052
1053 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1051.410 kb on + strand, within MPMX20_00997 at 1051.410 kb on + strand, within MPMX20_00997 at 1051.417 kb on + strand, within MPMX20_00997 at 1051.418 kb on - strand, within MPMX20_00997 at 1051.418 kb on - strand, within MPMX20_00997 at 1051.433 kb on + strand, within MPMX20_00997 at 1051.441 kb on - strand, within MPMX20_00997 at 1051.470 kb on + strand, within MPMX20_00997 at 1051.478 kb on - strand, within MPMX20_00997 at 1051.569 kb on + strand, within MPMX20_00997 at 1051.569 kb on + strand, within MPMX20_00997 at 1051.731 kb on + strand, within MPMX20_00997 at 1051.768 kb on + strand, within MPMX20_00997 at 1051.768 kb on + strand, within MPMX20_00997 at 1051.783 kb on + strand, within MPMX20_00997 at 1051.788 kb on + strand, within MPMX20_00997 at 1051.796 kb on - strand, within MPMX20_00997 at 1051.796 kb on - strand, within MPMX20_00997 at 1051.796 kb on - strand, within MPMX20_00997 at 1051.801 kb on - strand, within MPMX20_00997 at 1051.854 kb on + strand, within MPMX20_00997 at 1051.861 kb on - strand, within MPMX20_00997 at 1051.904 kb on + strand, within MPMX20_00997 at 1051.922 kb on + strand, within MPMX20_00997 at 1051.970 kb on + strand, within MPMX20_00997 at 1051.975 kb on + strand, within MPMX20_00997 at 1051.983 kb on - strand, within MPMX20_00997 at 1051.993 kb on + strand, within MPMX20_00997 at 1051.993 kb on + strand, within MPMX20_00997 at 1051.993 kb on + strand, within MPMX20_00997 at 1051.993 kb on + strand, within MPMX20_00997 at 1051.993 kb on + strand, within MPMX20_00997 at 1052.001 kb on - strand, within MPMX20_00997 at 1052.001 kb on - strand, within MPMX20_00997 at 1052.001 kb on - strand, within MPMX20_00997 at 1052.001 kb on - strand, within MPMX20_00997 at 1052.001 kb on - strand, within MPMX20_00997 at 1052.039 kb on - strand, within MPMX20_00997 at 1052.051 kb on - strand, within MPMX20_00997 at 1052.107 kb on + strand, within MPMX20_00997 at 1052.107 kb on + strand, within MPMX20_00997 at 1052.107 kb on + strand, within MPMX20_00997 at 1052.113 kb on + strand, within MPMX20_00997 at 1052.115 kb on - strand, within MPMX20_00997 at 1052.115 kb on - strand, within MPMX20_00997 at 1052.115 kb on - strand, within MPMX20_00997 at 1052.115 kb on - strand, within MPMX20_00997 at 1052.115 kb on - strand, within MPMX20_00997 at 1052.115 kb on - strand, within MPMX20_00997 at 1052.122 kb on - strand, within MPMX20_00997 at 1052.155 kb on - strand, within MPMX20_00997 at 1052.206 kb on + strand, within MPMX20_00997 at 1052.280 kb on + strand at 1052.290 kb on + strand at 1052.290 kb on + strand at 1052.290 kb on + strand at 1052.290 kb on + strand at 1052.290 kb on + strand at 1052.290 kb on + strand at 1052.290 kb on + strand at 1052.290 kb on + strand at 1052.290 kb on + strand at 1052.327 kb on + strand at 1052.327 kb on + strand at 1052.327 kb on + strand at 1052.327 kb on + strand at 1052.327 kb on + strand at 1052.327 kb on + strand at 1052.414 kb on + strand at 1052.414 kb on + strand at 1052.433 kb on + strand, within MPMX20_00998 at 1052.438 kb on + strand, within MPMX20_00998 at 1052.438 kb on + strand, within MPMX20_00998 at 1052.438 kb on + strand, within MPMX20_00998 at 1052.543 kb on + strand, within MPMX20_00998 at 1052.642 kb on + strand, within MPMX20_00998 at 1052.650 kb on + strand, within MPMX20_00998
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,051,410 + MPMX20_00997 0.15 -0.5 1,051,410 + MPMX20_00997 0.15 -0.2 1,051,417 + MPMX20_00997 0.16 -0.5 1,051,418 - MPMX20_00997 0.16 -0.5 1,051,418 - MPMX20_00997 0.16 -1.8 1,051,433 + MPMX20_00997 0.17 +0.1 1,051,441 - MPMX20_00997 0.18 +0.4 1,051,470 + MPMX20_00997 0.21 -1.4 1,051,478 - MPMX20_00997 0.21 -1.3 1,051,569 + MPMX20_00997 0.29 -1.4 1,051,569 + MPMX20_00997 0.29 -1.8 1,051,731 + MPMX20_00997 0.44 +0.2 1,051,768 + MPMX20_00997 0.47 -0.5 1,051,768 + MPMX20_00997 0.47 -0.9 1,051,783 + MPMX20_00997 0.48 -0.4 1,051,788 + MPMX20_00997 0.49 -0.7 1,051,796 - MPMX20_00997 0.49 +0.3 1,051,796 - MPMX20_00997 0.49 -0.6 1,051,796 - MPMX20_00997 0.49 -2.2 1,051,801 - MPMX20_00997 0.50 -0.3 1,051,854 + MPMX20_00997 0.55 -2.3 1,051,861 - MPMX20_00997 0.55 -1.5 1,051,904 + MPMX20_00997 0.59 +0.3 1,051,922 + MPMX20_00997 0.61 +0.3 1,051,970 + MPMX20_00997 0.65 -0.5 1,051,975 + MPMX20_00997 0.65 +0.3 1,051,983 - MPMX20_00997 0.66 -1.9 1,051,993 + MPMX20_00997 0.67 +0.8 1,051,993 + MPMX20_00997 0.67 +1.0 1,051,993 + MPMX20_00997 0.67 +0.4 1,051,993 + MPMX20_00997 0.67 +0.7 1,051,993 + MPMX20_00997 0.67 +1.3 1,052,001 - MPMX20_00997 0.68 +0.1 1,052,001 - MPMX20_00997 0.68 -1.2 1,052,001 - MPMX20_00997 0.68 -1.7 1,052,001 - MPMX20_00997 0.68 -0.6 1,052,001 - MPMX20_00997 0.68 -0.9 1,052,039 - MPMX20_00997 0.71 -2.3 1,052,051 - MPMX20_00997 0.72 +0.1 1,052,107 + MPMX20_00997 0.77 -1.9 1,052,107 + MPMX20_00997 0.77 -0.2 1,052,107 + MPMX20_00997 0.77 +0.3 1,052,113 + MPMX20_00997 0.78 +0.4 1,052,115 - MPMX20_00997 0.78 -0.7 1,052,115 - MPMX20_00997 0.78 +0.1 1,052,115 - MPMX20_00997 0.78 -1.3 1,052,115 - MPMX20_00997 0.78 +0.7 1,052,115 - MPMX20_00997 0.78 -1.3 1,052,115 - MPMX20_00997 0.78 +1.7 1,052,122 - MPMX20_00997 0.78 -0.2 1,052,155 - MPMX20_00997 0.81 -2.0 1,052,206 + MPMX20_00997 0.86 -1.7 1,052,280 + -1.3 1,052,290 + -1.9 1,052,290 + +0.9 1,052,290 + +1.4 1,052,290 + -0.0 1,052,290 + +0.7 1,052,290 + -0.7 1,052,290 + +1.7 1,052,290 + -3.9 1,052,290 + -0.2 1,052,327 + -0.3 1,052,327 + +0.6 1,052,327 + -0.9 1,052,327 + -1.0 1,052,327 + +2.7 1,052,327 + +0.7 1,052,414 + -1.5 1,052,414 + -2.9 1,052,433 + MPMX20_00998 0.14 -1.3 1,052,438 + MPMX20_00998 0.15 +0.7 1,052,438 + MPMX20_00998 0.15 -3.4 1,052,438 + MPMX20_00998 0.15 -0.9 1,052,543 + MPMX20_00998 0.47 -3.2 1,052,642 + MPMX20_00998 0.76 -1.3 1,052,650 + MPMX20_00998 0.79 -3.9
Or see this region's nucleotide sequence