Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00998

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00997 and MPMX20_00998 are separated by 22 nucleotidesMPMX20_00998 and MPMX20_00999 are separated by 60 nucleotides MPMX20_00997: MPMX20_00997 - Queuine tRNA-ribosyltransferase, at 1,051,238 to 1,052,365 _00997 MPMX20_00998: MPMX20_00998 - Sec translocon accessory complex subunit YajC, at 1,052,388 to 1,052,720 _00998 MPMX20_00999: MPMX20_00999 - Protein translocase subunit SecD, at 1,052,781 to 1,054,595 _00999 Position (kb) 1052 1053Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1051.410 kb on + strand, within MPMX20_00997at 1051.410 kb on + strand, within MPMX20_00997at 1051.417 kb on + strand, within MPMX20_00997at 1051.418 kb on - strand, within MPMX20_00997at 1051.418 kb on - strand, within MPMX20_00997at 1051.433 kb on + strand, within MPMX20_00997at 1051.441 kb on - strand, within MPMX20_00997at 1051.470 kb on + strand, within MPMX20_00997at 1051.478 kb on - strand, within MPMX20_00997at 1051.569 kb on + strand, within MPMX20_00997at 1051.569 kb on + strand, within MPMX20_00997at 1051.731 kb on + strand, within MPMX20_00997at 1051.768 kb on + strand, within MPMX20_00997at 1051.768 kb on + strand, within MPMX20_00997at 1051.783 kb on + strand, within MPMX20_00997at 1051.788 kb on + strand, within MPMX20_00997at 1051.796 kb on - strand, within MPMX20_00997at 1051.796 kb on - strand, within MPMX20_00997at 1051.796 kb on - strand, within MPMX20_00997at 1051.801 kb on - strand, within MPMX20_00997at 1051.854 kb on + strand, within MPMX20_00997at 1051.861 kb on - strand, within MPMX20_00997at 1051.904 kb on + strand, within MPMX20_00997at 1051.922 kb on + strand, within MPMX20_00997at 1051.970 kb on + strand, within MPMX20_00997at 1051.975 kb on + strand, within MPMX20_00997at 1051.983 kb on - strand, within MPMX20_00997at 1051.993 kb on + strand, within MPMX20_00997at 1051.993 kb on + strand, within MPMX20_00997at 1051.993 kb on + strand, within MPMX20_00997at 1051.993 kb on + strand, within MPMX20_00997at 1051.993 kb on + strand, within MPMX20_00997at 1052.001 kb on - strand, within MPMX20_00997at 1052.001 kb on - strand, within MPMX20_00997at 1052.001 kb on - strand, within MPMX20_00997at 1052.001 kb on - strand, within MPMX20_00997at 1052.001 kb on - strand, within MPMX20_00997at 1052.039 kb on - strand, within MPMX20_00997at 1052.051 kb on - strand, within MPMX20_00997at 1052.107 kb on + strand, within MPMX20_00997at 1052.107 kb on + strand, within MPMX20_00997at 1052.107 kb on + strand, within MPMX20_00997at 1052.113 kb on + strand, within MPMX20_00997at 1052.115 kb on - strand, within MPMX20_00997at 1052.115 kb on - strand, within MPMX20_00997at 1052.115 kb on - strand, within MPMX20_00997at 1052.115 kb on - strand, within MPMX20_00997at 1052.115 kb on - strand, within MPMX20_00997at 1052.115 kb on - strand, within MPMX20_00997at 1052.122 kb on - strand, within MPMX20_00997at 1052.155 kb on - strand, within MPMX20_00997at 1052.206 kb on + strand, within MPMX20_00997at 1052.280 kb on + strandat 1052.290 kb on + strandat 1052.290 kb on + strandat 1052.290 kb on + strandat 1052.290 kb on + strandat 1052.290 kb on + strandat 1052.290 kb on + strandat 1052.290 kb on + strandat 1052.290 kb on + strandat 1052.290 kb on + strandat 1052.327 kb on + strandat 1052.327 kb on + strandat 1052.327 kb on + strandat 1052.327 kb on + strandat 1052.327 kb on + strandat 1052.327 kb on + strandat 1052.414 kb on + strandat 1052.414 kb on + strandat 1052.433 kb on + strand, within MPMX20_00998at 1052.438 kb on + strand, within MPMX20_00998at 1052.438 kb on + strand, within MPMX20_00998at 1052.438 kb on + strand, within MPMX20_00998at 1052.543 kb on + strand, within MPMX20_00998at 1052.642 kb on + strand, within MPMX20_00998at 1052.650 kb on + strand, within MPMX20_00998

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,051,410 + MPMX20_00997 0.15 -0.5
1,051,410 + MPMX20_00997 0.15 -0.2
1,051,417 + MPMX20_00997 0.16 -0.5
1,051,418 - MPMX20_00997 0.16 -0.5
1,051,418 - MPMX20_00997 0.16 -1.8
1,051,433 + MPMX20_00997 0.17 +0.1
1,051,441 - MPMX20_00997 0.18 +0.4
1,051,470 + MPMX20_00997 0.21 -1.4
1,051,478 - MPMX20_00997 0.21 -1.3
1,051,569 + MPMX20_00997 0.29 -1.4
1,051,569 + MPMX20_00997 0.29 -1.8
1,051,731 + MPMX20_00997 0.44 +0.2
1,051,768 + MPMX20_00997 0.47 -0.5
1,051,768 + MPMX20_00997 0.47 -0.9
1,051,783 + MPMX20_00997 0.48 -0.4
1,051,788 + MPMX20_00997 0.49 -0.7
1,051,796 - MPMX20_00997 0.49 +0.3
1,051,796 - MPMX20_00997 0.49 -0.6
1,051,796 - MPMX20_00997 0.49 -2.2
1,051,801 - MPMX20_00997 0.50 -0.3
1,051,854 + MPMX20_00997 0.55 -2.3
1,051,861 - MPMX20_00997 0.55 -1.5
1,051,904 + MPMX20_00997 0.59 +0.3
1,051,922 + MPMX20_00997 0.61 +0.3
1,051,970 + MPMX20_00997 0.65 -0.5
1,051,975 + MPMX20_00997 0.65 +0.3
1,051,983 - MPMX20_00997 0.66 -1.9
1,051,993 + MPMX20_00997 0.67 +0.8
1,051,993 + MPMX20_00997 0.67 +1.0
1,051,993 + MPMX20_00997 0.67 +0.4
1,051,993 + MPMX20_00997 0.67 +0.7
1,051,993 + MPMX20_00997 0.67 +1.3
1,052,001 - MPMX20_00997 0.68 +0.1
1,052,001 - MPMX20_00997 0.68 -1.2
1,052,001 - MPMX20_00997 0.68 -1.7
1,052,001 - MPMX20_00997 0.68 -0.6
1,052,001 - MPMX20_00997 0.68 -0.9
1,052,039 - MPMX20_00997 0.71 -2.3
1,052,051 - MPMX20_00997 0.72 +0.1
1,052,107 + MPMX20_00997 0.77 -1.9
1,052,107 + MPMX20_00997 0.77 -0.2
1,052,107 + MPMX20_00997 0.77 +0.3
1,052,113 + MPMX20_00997 0.78 +0.4
1,052,115 - MPMX20_00997 0.78 -0.7
1,052,115 - MPMX20_00997 0.78 +0.1
1,052,115 - MPMX20_00997 0.78 -1.3
1,052,115 - MPMX20_00997 0.78 +0.7
1,052,115 - MPMX20_00997 0.78 -1.3
1,052,115 - MPMX20_00997 0.78 +1.7
1,052,122 - MPMX20_00997 0.78 -0.2
1,052,155 - MPMX20_00997 0.81 -2.0
1,052,206 + MPMX20_00997 0.86 -1.7
1,052,280 + -1.3
1,052,290 + -1.9
1,052,290 + +0.9
1,052,290 + +1.4
1,052,290 + -0.0
1,052,290 + +0.7
1,052,290 + -0.7
1,052,290 + +1.7
1,052,290 + -3.9
1,052,290 + -0.2
1,052,327 + -0.3
1,052,327 + +0.6
1,052,327 + -0.9
1,052,327 + -1.0
1,052,327 + +2.7
1,052,327 + +0.7
1,052,414 + -1.5
1,052,414 + -2.9
1,052,433 + MPMX20_00998 0.14 -1.3
1,052,438 + MPMX20_00998 0.15 +0.7
1,052,438 + MPMX20_00998 0.15 -3.4
1,052,438 + MPMX20_00998 0.15 -0.9
1,052,543 + MPMX20_00998 0.47 -3.2
1,052,642 + MPMX20_00998 0.76 -1.3
1,052,650 + MPMX20_00998 0.79 -3.9

Or see this region's nucleotide sequence