Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02697 and MPMX20_02698 are separated by 61 nucleotides MPMX20_02698 and MPMX20_02699 are separated by 9 nucleotides
MPMX20_02697: MPMX20_02697 - K(+)/H(+) antiporter NhaP2, at 2,850,127 to 2,851,860
_02697
MPMX20_02698: MPMX20_02698 - Alanine racemase, catabolic, at 2,851,922 to 2,852,992
_02698
MPMX20_02699: MPMX20_02699 - D-amino acid dehydrogenase, at 2,853,002 to 2,854,300
_02699
Position (kb)
2851
2852
2853 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2850.948 kb on + strand, within MPMX20_02697 at 2850.948 kb on + strand, within MPMX20_02697 at 2850.948 kb on + strand, within MPMX20_02697 at 2850.948 kb on + strand, within MPMX20_02697 at 2850.956 kb on - strand, within MPMX20_02697 at 2850.956 kb on - strand, within MPMX20_02697 at 2850.956 kb on - strand, within MPMX20_02697 at 2850.956 kb on - strand, within MPMX20_02697 at 2850.956 kb on - strand, within MPMX20_02697 at 2850.974 kb on + strand, within MPMX20_02697 at 2850.974 kb on + strand, within MPMX20_02697 at 2851.001 kb on + strand, within MPMX20_02697 at 2851.014 kb on + strand, within MPMX20_02697 at 2851.030 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.114 kb on - strand, within MPMX20_02697 at 2851.114 kb on - strand, within MPMX20_02697 at 2851.114 kb on - strand, within MPMX20_02697 at 2851.144 kb on + strand, within MPMX20_02697 at 2851.203 kb on - strand, within MPMX20_02697 at 2851.394 kb on - strand, within MPMX20_02697 at 2851.499 kb on + strand, within MPMX20_02697 at 2851.499 kb on + strand, within MPMX20_02697 at 2851.599 kb on + strand, within MPMX20_02697 at 2851.662 kb on + strand, within MPMX20_02697 at 2851.682 kb on + strand, within MPMX20_02697 at 2851.689 kb on - strand at 2851.742 kb on - strand at 2851.790 kb on - strand at 2851.829 kb on + strand at 2851.892 kb on + strand at 2851.964 kb on - strand at 2851.966 kb on + strand at 2852.046 kb on + strand, within MPMX20_02698 at 2852.232 kb on + strand, within MPMX20_02698 at 2852.247 kb on + strand, within MPMX20_02698 at 2852.335 kb on + strand, within MPMX20_02698 at 2852.343 kb on - strand, within MPMX20_02698 at 2852.449 kb on - strand, within MPMX20_02698 at 2852.566 kb on + strand, within MPMX20_02698 at 2852.568 kb on - strand, within MPMX20_02698 at 2852.568 kb on - strand, within MPMX20_02698 at 2852.597 kb on - strand, within MPMX20_02698 at 2852.671 kb on - strand, within MPMX20_02698 at 2852.678 kb on - strand, within MPMX20_02698 at 2852.678 kb on - strand, within MPMX20_02698 at 2852.711 kb on + strand, within MPMX20_02698 at 2852.752 kb on - strand, within MPMX20_02698 at 2852.872 kb on + strand, within MPMX20_02698 at 2852.934 kb on + strand at 2852.934 kb on + strand at 2852.942 kb on - strand at 2852.985 kb on - strand at 2852.995 kb on - strand at 2852.995 kb on - strand at 2852.998 kb on + strand at 2853.125 kb on - strand at 2853.127 kb on + strand at 2853.127 kb on + strand at 2853.135 kb on - strand, within MPMX20_02699 at 2853.220 kb on + strand, within MPMX20_02699 at 2853.300 kb on + strand, within MPMX20_02699 at 2853.302 kb on - strand, within MPMX20_02699 at 2853.467 kb on + strand, within MPMX20_02699 at 2853.547 kb on - strand, within MPMX20_02699 at 2853.594 kb on - strand, within MPMX20_02699 at 2853.731 kb on - strand, within MPMX20_02699 at 2853.756 kb on + strand, within MPMX20_02699 at 2853.771 kb on + strand, within MPMX20_02699 at 2853.777 kb on + strand, within MPMX20_02699 at 2853.779 kb on - strand, within MPMX20_02699 at 2853.779 kb on - strand, within MPMX20_02699 at 2853.779 kb on - strand, within MPMX20_02699 at 2853.803 kb on - strand, within MPMX20_02699 at 2853.803 kb on - strand, within MPMX20_02699 at 2853.881 kb on - strand, within MPMX20_02699 at 2853.956 kb on + strand, within MPMX20_02699 at 2853.976 kb on + strand, within MPMX20_02699
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,850,948 + MPMX20_02697 0.47 -0.1 2,850,948 + MPMX20_02697 0.47 +1.1 2,850,948 + MPMX20_02697 0.47 -1.2 2,850,948 + MPMX20_02697 0.47 +1.1 2,850,956 - MPMX20_02697 0.48 -2.3 2,850,956 - MPMX20_02697 0.48 -0.3 2,850,956 - MPMX20_02697 0.48 -0.6 2,850,956 - MPMX20_02697 0.48 -0.6 2,850,956 - MPMX20_02697 0.48 +0.3 2,850,974 + MPMX20_02697 0.49 -0.3 2,850,974 + MPMX20_02697 0.49 -0.8 2,851,001 + MPMX20_02697 0.50 +1.8 2,851,014 + MPMX20_02697 0.51 -1.7 2,851,030 + MPMX20_02697 0.52 -0.5 2,851,106 + MPMX20_02697 0.56 -0.1 2,851,106 + MPMX20_02697 0.56 +0.8 2,851,106 + MPMX20_02697 0.56 -0.1 2,851,106 + MPMX20_02697 0.56 +0.7 2,851,106 + MPMX20_02697 0.56 -0.9 2,851,106 + MPMX20_02697 0.56 +1.7 2,851,114 - MPMX20_02697 0.57 +0.3 2,851,114 - MPMX20_02697 0.57 -0.0 2,851,114 - MPMX20_02697 0.57 -0.2 2,851,144 + MPMX20_02697 0.59 +0.8 2,851,203 - MPMX20_02697 0.62 +0.1 2,851,394 - MPMX20_02697 0.73 -0.1 2,851,499 + MPMX20_02697 0.79 -0.8 2,851,499 + MPMX20_02697 0.79 -0.6 2,851,599 + MPMX20_02697 0.85 +0.1 2,851,662 + MPMX20_02697 0.89 +0.4 2,851,682 + MPMX20_02697 0.90 -0.1 2,851,689 - -0.1 2,851,742 - -1.8 2,851,790 - +0.3 2,851,829 + -1.2 2,851,892 + -0.1 2,851,964 - -0.1 2,851,966 + +0.5 2,852,046 + MPMX20_02698 0.12 +1.7 2,852,232 + MPMX20_02698 0.29 -0.6 2,852,247 + MPMX20_02698 0.30 +2.1 2,852,335 + MPMX20_02698 0.39 -1.2 2,852,343 - MPMX20_02698 0.39 +0.7 2,852,449 - MPMX20_02698 0.49 -1.1 2,852,566 + MPMX20_02698 0.60 +1.4 2,852,568 - MPMX20_02698 0.60 -0.7 2,852,568 - MPMX20_02698 0.60 +0.1 2,852,597 - MPMX20_02698 0.63 -0.6 2,852,671 - MPMX20_02698 0.70 +0.4 2,852,678 - MPMX20_02698 0.71 +1.3 2,852,678 - MPMX20_02698 0.71 -0.4 2,852,711 + MPMX20_02698 0.74 +0.7 2,852,752 - MPMX20_02698 0.77 -0.6 2,852,872 + MPMX20_02698 0.89 -0.2 2,852,934 + -1.2 2,852,934 + +0.2 2,852,942 - -0.5 2,852,985 - -0.0 2,852,995 - -0.8 2,852,995 - -0.6 2,852,998 + +0.5 2,853,125 - -0.1 2,853,127 + -1.4 2,853,127 + +0.4 2,853,135 - MPMX20_02699 0.10 -0.6 2,853,220 + MPMX20_02699 0.17 -1.6 2,853,300 + MPMX20_02699 0.23 +0.4 2,853,302 - MPMX20_02699 0.23 -0.9 2,853,467 + MPMX20_02699 0.36 +0.7 2,853,547 - MPMX20_02699 0.42 +0.4 2,853,594 - MPMX20_02699 0.46 -1.5 2,853,731 - MPMX20_02699 0.56 -1.1 2,853,756 + MPMX20_02699 0.58 -0.4 2,853,771 + MPMX20_02699 0.59 -0.2 2,853,777 + MPMX20_02699 0.60 -1.5 2,853,779 - MPMX20_02699 0.60 -2.0 2,853,779 - MPMX20_02699 0.60 -0.5 2,853,779 - MPMX20_02699 0.60 -1.1 2,853,803 - MPMX20_02699 0.62 +0.2 2,853,803 - MPMX20_02699 0.62 -1.8 2,853,881 - MPMX20_02699 0.68 -0.8 2,853,956 + MPMX20_02699 0.73 -1.4 2,853,976 + MPMX20_02699 0.75 -0.4
Or see this region's nucleotide sequence