Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02698

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02697 and MPMX20_02698 are separated by 61 nucleotidesMPMX20_02698 and MPMX20_02699 are separated by 9 nucleotides MPMX20_02697: MPMX20_02697 - K(+)/H(+) antiporter NhaP2, at 2,850,127 to 2,851,860 _02697 MPMX20_02698: MPMX20_02698 - Alanine racemase, catabolic, at 2,851,922 to 2,852,992 _02698 MPMX20_02699: MPMX20_02699 - D-amino acid dehydrogenase, at 2,853,002 to 2,854,300 _02699 Position (kb) 2851 2852 2853Strain fitness (log2 ratio) -2 -1 0 1 2at 2850.948 kb on + strand, within MPMX20_02697at 2850.948 kb on + strand, within MPMX20_02697at 2850.948 kb on + strand, within MPMX20_02697at 2850.948 kb on + strand, within MPMX20_02697at 2850.956 kb on - strand, within MPMX20_02697at 2850.956 kb on - strand, within MPMX20_02697at 2850.956 kb on - strand, within MPMX20_02697at 2850.956 kb on - strand, within MPMX20_02697at 2850.956 kb on - strand, within MPMX20_02697at 2850.974 kb on + strand, within MPMX20_02697at 2850.974 kb on + strand, within MPMX20_02697at 2851.001 kb on + strand, within MPMX20_02697at 2851.014 kb on + strand, within MPMX20_02697at 2851.030 kb on + strand, within MPMX20_02697at 2851.106 kb on + strand, within MPMX20_02697at 2851.106 kb on + strand, within MPMX20_02697at 2851.106 kb on + strand, within MPMX20_02697at 2851.106 kb on + strand, within MPMX20_02697at 2851.106 kb on + strand, within MPMX20_02697at 2851.106 kb on + strand, within MPMX20_02697at 2851.114 kb on - strand, within MPMX20_02697at 2851.114 kb on - strand, within MPMX20_02697at 2851.114 kb on - strand, within MPMX20_02697at 2851.144 kb on + strand, within MPMX20_02697at 2851.203 kb on - strand, within MPMX20_02697at 2851.394 kb on - strand, within MPMX20_02697at 2851.499 kb on + strand, within MPMX20_02697at 2851.499 kb on + strand, within MPMX20_02697at 2851.599 kb on + strand, within MPMX20_02697at 2851.662 kb on + strand, within MPMX20_02697at 2851.682 kb on + strand, within MPMX20_02697at 2851.689 kb on - strandat 2851.742 kb on - strandat 2851.790 kb on - strandat 2851.829 kb on + strandat 2851.892 kb on + strandat 2851.964 kb on - strandat 2851.966 kb on + strandat 2852.046 kb on + strand, within MPMX20_02698at 2852.232 kb on + strand, within MPMX20_02698at 2852.247 kb on + strand, within MPMX20_02698at 2852.335 kb on + strand, within MPMX20_02698at 2852.343 kb on - strand, within MPMX20_02698at 2852.449 kb on - strand, within MPMX20_02698at 2852.566 kb on + strand, within MPMX20_02698at 2852.568 kb on - strand, within MPMX20_02698at 2852.568 kb on - strand, within MPMX20_02698at 2852.597 kb on - strand, within MPMX20_02698at 2852.671 kb on - strand, within MPMX20_02698at 2852.678 kb on - strand, within MPMX20_02698at 2852.678 kb on - strand, within MPMX20_02698at 2852.711 kb on + strand, within MPMX20_02698at 2852.752 kb on - strand, within MPMX20_02698at 2852.872 kb on + strand, within MPMX20_02698at 2852.934 kb on + strandat 2852.934 kb on + strandat 2852.942 kb on - strandat 2852.985 kb on - strandat 2852.995 kb on - strandat 2852.995 kb on - strandat 2852.998 kb on + strandat 2853.125 kb on - strandat 2853.127 kb on + strandat 2853.127 kb on + strandat 2853.135 kb on - strand, within MPMX20_02699at 2853.220 kb on + strand, within MPMX20_02699at 2853.300 kb on + strand, within MPMX20_02699at 2853.302 kb on - strand, within MPMX20_02699at 2853.467 kb on + strand, within MPMX20_02699at 2853.547 kb on - strand, within MPMX20_02699at 2853.594 kb on - strand, within MPMX20_02699at 2853.731 kb on - strand, within MPMX20_02699at 2853.756 kb on + strand, within MPMX20_02699at 2853.771 kb on + strand, within MPMX20_02699at 2853.777 kb on + strand, within MPMX20_02699at 2853.779 kb on - strand, within MPMX20_02699at 2853.779 kb on - strand, within MPMX20_02699at 2853.779 kb on - strand, within MPMX20_02699at 2853.803 kb on - strand, within MPMX20_02699at 2853.803 kb on - strand, within MPMX20_02699at 2853.881 kb on - strand, within MPMX20_02699at 2853.956 kb on + strand, within MPMX20_02699at 2853.976 kb on + strand, within MPMX20_02699

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,850,948 + MPMX20_02697 0.47 -0.1
2,850,948 + MPMX20_02697 0.47 +1.1
2,850,948 + MPMX20_02697 0.47 -1.2
2,850,948 + MPMX20_02697 0.47 +1.1
2,850,956 - MPMX20_02697 0.48 -2.3
2,850,956 - MPMX20_02697 0.48 -0.3
2,850,956 - MPMX20_02697 0.48 -0.6
2,850,956 - MPMX20_02697 0.48 -0.6
2,850,956 - MPMX20_02697 0.48 +0.3
2,850,974 + MPMX20_02697 0.49 -0.3
2,850,974 + MPMX20_02697 0.49 -0.8
2,851,001 + MPMX20_02697 0.50 +1.8
2,851,014 + MPMX20_02697 0.51 -1.7
2,851,030 + MPMX20_02697 0.52 -0.5
2,851,106 + MPMX20_02697 0.56 -0.1
2,851,106 + MPMX20_02697 0.56 +0.8
2,851,106 + MPMX20_02697 0.56 -0.1
2,851,106 + MPMX20_02697 0.56 +0.7
2,851,106 + MPMX20_02697 0.56 -0.9
2,851,106 + MPMX20_02697 0.56 +1.7
2,851,114 - MPMX20_02697 0.57 +0.3
2,851,114 - MPMX20_02697 0.57 -0.0
2,851,114 - MPMX20_02697 0.57 -0.2
2,851,144 + MPMX20_02697 0.59 +0.8
2,851,203 - MPMX20_02697 0.62 +0.1
2,851,394 - MPMX20_02697 0.73 -0.1
2,851,499 + MPMX20_02697 0.79 -0.8
2,851,499 + MPMX20_02697 0.79 -0.6
2,851,599 + MPMX20_02697 0.85 +0.1
2,851,662 + MPMX20_02697 0.89 +0.4
2,851,682 + MPMX20_02697 0.90 -0.1
2,851,689 - -0.1
2,851,742 - -1.8
2,851,790 - +0.3
2,851,829 + -1.2
2,851,892 + -0.1
2,851,964 - -0.1
2,851,966 + +0.5
2,852,046 + MPMX20_02698 0.12 +1.7
2,852,232 + MPMX20_02698 0.29 -0.6
2,852,247 + MPMX20_02698 0.30 +2.1
2,852,335 + MPMX20_02698 0.39 -1.2
2,852,343 - MPMX20_02698 0.39 +0.7
2,852,449 - MPMX20_02698 0.49 -1.1
2,852,566 + MPMX20_02698 0.60 +1.4
2,852,568 - MPMX20_02698 0.60 -0.7
2,852,568 - MPMX20_02698 0.60 +0.1
2,852,597 - MPMX20_02698 0.63 -0.6
2,852,671 - MPMX20_02698 0.70 +0.4
2,852,678 - MPMX20_02698 0.71 +1.3
2,852,678 - MPMX20_02698 0.71 -0.4
2,852,711 + MPMX20_02698 0.74 +0.7
2,852,752 - MPMX20_02698 0.77 -0.6
2,852,872 + MPMX20_02698 0.89 -0.2
2,852,934 + -1.2
2,852,934 + +0.2
2,852,942 - -0.5
2,852,985 - -0.0
2,852,995 - -0.8
2,852,995 - -0.6
2,852,998 + +0.5
2,853,125 - -0.1
2,853,127 + -1.4
2,853,127 + +0.4
2,853,135 - MPMX20_02699 0.10 -0.6
2,853,220 + MPMX20_02699 0.17 -1.6
2,853,300 + MPMX20_02699 0.23 +0.4
2,853,302 - MPMX20_02699 0.23 -0.9
2,853,467 + MPMX20_02699 0.36 +0.7
2,853,547 - MPMX20_02699 0.42 +0.4
2,853,594 - MPMX20_02699 0.46 -1.5
2,853,731 - MPMX20_02699 0.56 -1.1
2,853,756 + MPMX20_02699 0.58 -0.4
2,853,771 + MPMX20_02699 0.59 -0.2
2,853,777 + MPMX20_02699 0.60 -1.5
2,853,779 - MPMX20_02699 0.60 -2.0
2,853,779 - MPMX20_02699 0.60 -0.5
2,853,779 - MPMX20_02699 0.60 -1.1
2,853,803 - MPMX20_02699 0.62 +0.2
2,853,803 - MPMX20_02699 0.62 -1.8
2,853,881 - MPMX20_02699 0.68 -0.8
2,853,956 + MPMX20_02699 0.73 -1.4
2,853,976 + MPMX20_02699 0.75 -0.4

Or see this region's nucleotide sequence