Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01556 and MPMX20_01557 are separated by 10 nucleotides MPMX20_01557 and MPMX20_01558 are separated by 1 nucleotides MPMX20_01558 and MPMX20_01559 are separated by 274 nucleotides
MPMX20_01556: MPMX20_01556 - Dimethyl sulfoxide reductase DmsA, at 1,633,070 to 1,635,511
_01556
MPMX20_01557: MPMX20_01557 - Anaerobic dimethyl sulfoxide reductase chain B, at 1,635,522 to 1,636,139
_01557
MPMX20_01558: MPMX20_01558 - Anaerobic dimethyl sulfoxide reductase chain C, at 1,636,141 to 1,637,004
_01558
MPMX20_01559: MPMX20_01559 - putative MFS-type transporter YcaD, at 1,637,279 to 1,638,427
_01559
Position (kb)
1636
1637
1638 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1635.177 kb on - strand, within MPMX20_01556 at 1635.191 kb on + strand, within MPMX20_01556 at 1635.191 kb on + strand, within MPMX20_01556 at 1635.199 kb on - strand, within MPMX20_01556 at 1635.199 kb on - strand, within MPMX20_01556 at 1635.199 kb on - strand, within MPMX20_01556 at 1635.219 kb on - strand, within MPMX20_01556 at 1635.305 kb on - strand at 1635.330 kb on - strand at 1635.333 kb on + strand at 1635.370 kb on + strand at 1635.405 kb on + strand at 1635.460 kb on + strand at 1635.513 kb on - strand at 1635.513 kb on - strand at 1636.100 kb on + strand at 1636.141 kb on - strand at 1636.202 kb on - strand at 1636.216 kb on - strand at 1636.233 kb on + strand, within MPMX20_01558 at 1636.233 kb on + strand, within MPMX20_01558 at 1636.241 kb on - strand, within MPMX20_01558 at 1636.273 kb on + strand, within MPMX20_01558 at 1636.275 kb on - strand, within MPMX20_01558 at 1636.283 kb on + strand, within MPMX20_01558 at 1636.291 kb on - strand, within MPMX20_01558 at 1636.297 kb on - strand, within MPMX20_01558 at 1636.327 kb on + strand, within MPMX20_01558 at 1636.364 kb on + strand, within MPMX20_01558 at 1636.381 kb on - strand, within MPMX20_01558 at 1636.384 kb on + strand, within MPMX20_01558 at 1636.440 kb on + strand, within MPMX20_01558 at 1636.443 kb on - strand, within MPMX20_01558 at 1636.477 kb on + strand, within MPMX20_01558 at 1636.485 kb on - strand, within MPMX20_01558 at 1636.487 kb on + strand, within MPMX20_01558 at 1636.495 kb on - strand, within MPMX20_01558 at 1636.495 kb on - strand, within MPMX20_01558 at 1636.515 kb on - strand, within MPMX20_01558 at 1636.516 kb on + strand, within MPMX20_01558 at 1636.518 kb on - strand, within MPMX20_01558 at 1636.546 kb on + strand, within MPMX20_01558 at 1636.567 kb on + strand, within MPMX20_01558 at 1636.615 kb on - strand, within MPMX20_01558 at 1636.617 kb on + strand, within MPMX20_01558 at 1636.625 kb on - strand, within MPMX20_01558 at 1636.625 kb on - strand, within MPMX20_01558 at 1636.633 kb on + strand, within MPMX20_01558 at 1636.788 kb on - strand, within MPMX20_01558 at 1636.795 kb on - strand, within MPMX20_01558 at 1636.883 kb on - strand, within MPMX20_01558 at 1636.884 kb on + strand, within MPMX20_01558 at 1636.892 kb on - strand, within MPMX20_01558 at 1636.957 kb on - strand at 1636.959 kb on + strand at 1636.959 kb on + strand at 1636.959 kb on + strand at 1636.959 kb on + strand at 1636.959 kb on + strand at 1636.959 kb on + strand at 1636.967 kb on - strand at 1636.967 kb on - strand at 1636.975 kb on - strand at 1636.984 kb on + strand at 1636.984 kb on + strand at 1636.985 kb on + strand at 1636.985 kb on - strand at 1636.990 kb on + strand at 1636.992 kb on - strand at 1636.997 kb on + strand at 1637.004 kb on + strand at 1637.020 kb on + strand at 1637.025 kb on + strand at 1637.027 kb on - strand at 1637.027 kb on - strand at 1637.176 kb on + strand at 1637.184 kb on - strand at 1637.206 kb on - strand at 1637.242 kb on - strand at 1637.313 kb on + strand at 1637.324 kb on + strand at 1637.356 kb on - strand at 1637.356 kb on - strand at 1637.416 kb on - strand, within MPMX20_01559 at 1637.440 kb on + strand, within MPMX20_01559 at 1637.455 kb on + strand, within MPMX20_01559 at 1637.455 kb on + strand, within MPMX20_01559 at 1637.463 kb on - strand, within MPMX20_01559 at 1637.496 kb on + strand, within MPMX20_01559 at 1637.504 kb on - strand, within MPMX20_01559 at 1637.532 kb on + strand, within MPMX20_01559 at 1637.638 kb on + strand, within MPMX20_01559 at 1637.643 kb on - strand, within MPMX20_01559 at 1637.676 kb on - strand, within MPMX20_01559 at 1637.678 kb on + strand, within MPMX20_01559 at 1637.790 kb on - strand, within MPMX20_01559 at 1637.822 kb on + strand, within MPMX20_01559 at 1637.847 kb on - strand, within MPMX20_01559 at 1637.854 kb on + strand, within MPMX20_01559 at 1637.862 kb on - strand, within MPMX20_01559 at 1637.862 kb on - strand, within MPMX20_01559 at 1637.867 kb on - strand, within MPMX20_01559 at 1637.886 kb on + strand, within MPMX20_01559 at 1637.921 kb on + strand, within MPMX20_01559 at 1637.970 kb on - strand, within MPMX20_01559
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,635,177 - MPMX20_01556 0.86 -0.8 1,635,191 + MPMX20_01556 0.87 -0.4 1,635,191 + MPMX20_01556 0.87 -0.5 1,635,199 - MPMX20_01556 0.87 -0.3 1,635,199 - MPMX20_01556 0.87 -1.8 1,635,199 - MPMX20_01556 0.87 -0.0 1,635,219 - MPMX20_01556 0.88 +0.9 1,635,305 - +0.1 1,635,330 - -0.0 1,635,333 + +0.5 1,635,370 + +0.3 1,635,405 + +1.5 1,635,460 + -0.0 1,635,513 - -0.6 1,635,513 - -1.1 1,636,100 + -2.0 1,636,141 - +3.5 1,636,202 - +0.8 1,636,216 - -0.0 1,636,233 + MPMX20_01558 0.11 -0.8 1,636,233 + MPMX20_01558 0.11 +0.2 1,636,241 - MPMX20_01558 0.12 +0.4 1,636,273 + MPMX20_01558 0.15 +0.8 1,636,275 - MPMX20_01558 0.16 -1.1 1,636,283 + MPMX20_01558 0.16 +3.3 1,636,291 - MPMX20_01558 0.17 +1.0 1,636,297 - MPMX20_01558 0.18 -1.4 1,636,327 + MPMX20_01558 0.22 -1.5 1,636,364 + MPMX20_01558 0.26 -1.3 1,636,381 - MPMX20_01558 0.28 +2.1 1,636,384 + MPMX20_01558 0.28 -0.6 1,636,440 + MPMX20_01558 0.35 -1.9 1,636,443 - MPMX20_01558 0.35 -0.2 1,636,477 + MPMX20_01558 0.39 -2.2 1,636,485 - MPMX20_01558 0.40 +1.0 1,636,487 + MPMX20_01558 0.40 +0.8 1,636,495 - MPMX20_01558 0.41 -1.0 1,636,495 - MPMX20_01558 0.41 +0.5 1,636,515 - MPMX20_01558 0.43 -1.8 1,636,516 + MPMX20_01558 0.43 -0.9 1,636,518 - MPMX20_01558 0.44 -1.2 1,636,546 + MPMX20_01558 0.47 +1.5 1,636,567 + MPMX20_01558 0.49 -2.0 1,636,615 - MPMX20_01558 0.55 +1.1 1,636,617 + MPMX20_01558 0.55 +1.7 1,636,625 - MPMX20_01558 0.56 -1.4 1,636,625 - MPMX20_01558 0.56 -0.4 1,636,633 + MPMX20_01558 0.57 +1.5 1,636,788 - MPMX20_01558 0.75 +0.1 1,636,795 - MPMX20_01558 0.76 -0.4 1,636,883 - MPMX20_01558 0.86 +0.4 1,636,884 + MPMX20_01558 0.86 -0.8 1,636,892 - MPMX20_01558 0.87 -3.5 1,636,957 - +1.5 1,636,959 + -0.5 1,636,959 + -0.8 1,636,959 + -0.1 1,636,959 + -1.5 1,636,959 + -0.7 1,636,959 + +1.0 1,636,967 - +1.5 1,636,967 - -1.6 1,636,975 - +0.5 1,636,984 + -0.3 1,636,984 + +1.2 1,636,985 + +1.4 1,636,985 - -0.9 1,636,990 + -0.3 1,636,992 - +1.2 1,636,997 + -0.5 1,637,004 + -2.5 1,637,020 + -0.6 1,637,025 + -0.2 1,637,027 - -1.3 1,637,027 - -1.3 1,637,176 + -0.3 1,637,184 - -1.7 1,637,206 - -0.5 1,637,242 - -0.3 1,637,313 + +0.2 1,637,324 + -1.9 1,637,356 - -1.1 1,637,356 - +2.5 1,637,416 - MPMX20_01559 0.12 -0.1 1,637,440 + MPMX20_01559 0.14 +1.0 1,637,455 + MPMX20_01559 0.15 +0.9 1,637,455 + MPMX20_01559 0.15 -2.5 1,637,463 - MPMX20_01559 0.16 -0.6 1,637,496 + MPMX20_01559 0.19 -1.1 1,637,504 - MPMX20_01559 0.20 -1.1 1,637,532 + MPMX20_01559 0.22 -1.9 1,637,638 + MPMX20_01559 0.31 -0.6 1,637,643 - MPMX20_01559 0.32 -0.7 1,637,676 - MPMX20_01559 0.35 +0.7 1,637,678 + MPMX20_01559 0.35 +0.5 1,637,790 - MPMX20_01559 0.44 +0.2 1,637,822 + MPMX20_01559 0.47 -1.5 1,637,847 - MPMX20_01559 0.49 -0.5 1,637,854 + MPMX20_01559 0.50 +0.5 1,637,862 - MPMX20_01559 0.51 -1.9 1,637,862 - MPMX20_01559 0.51 +1.0 1,637,867 - MPMX20_01559 0.51 +0.1 1,637,886 + MPMX20_01559 0.53 -1.0 1,637,921 + MPMX20_01559 0.56 -2.0 1,637,970 - MPMX20_01559 0.60 -2.3
Or see this region's nucleotide sequence