Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01925

Experiment: 0.1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01924 and MPMX20_01925 are separated by 321 nucleotidesMPMX20_01925 and MPMX20_01926 are separated by 197 nucleotides MPMX20_01924: MPMX20_01924 - Beta-xylosidase, at 2,017,508 to 2,019,883 _01924 MPMX20_01925: MPMX20_01925 - Putative transport protein YdiK, at 2,020,205 to 2,021,320 _01925 MPMX20_01926: MPMX20_01926 - hypothetical protein, at 2,021,518 to 2,024,574 _01926 Position (kb) 2020 2021 2022Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2019.220 kb on - strand, within MPMX20_01924at 2019.236 kb on - strand, within MPMX20_01924at 2019.272 kb on + strand, within MPMX20_01924at 2019.286 kb on - strand, within MPMX20_01924at 2019.310 kb on + strand, within MPMX20_01924at 2019.315 kb on + strand, within MPMX20_01924at 2019.323 kb on - strand, within MPMX20_01924at 2019.331 kb on - strand, within MPMX20_01924at 2019.475 kb on - strand, within MPMX20_01924at 2019.502 kb on - strand, within MPMX20_01924at 2019.524 kb on - strand, within MPMX20_01924at 2019.541 kb on - strand, within MPMX20_01924at 2019.577 kb on + strand, within MPMX20_01924at 2019.581 kb on - strand, within MPMX20_01924at 2019.591 kb on - strand, within MPMX20_01924at 2019.591 kb on - strand, within MPMX20_01924at 2019.638 kb on - strand, within MPMX20_01924at 2019.684 kb on + strandat 2019.684 kb on + strandat 2019.684 kb on + strandat 2019.684 kb on + strandat 2019.684 kb on + strandat 2019.684 kb on + strandat 2019.684 kb on + strandat 2019.684 kb on + strandat 2019.692 kb on - strandat 2019.692 kb on - strandat 2019.692 kb on - strandat 2019.692 kb on - strandat 2019.766 kb on + strandat 2019.805 kb on - strandat 2019.921 kb on + strandat 2019.921 kb on + strandat 2019.924 kb on - strandat 2019.925 kb on - strandat 2019.929 kb on - strandat 2019.929 kb on - strandat 2019.929 kb on - strandat 2019.929 kb on - strandat 2020.030 kb on + strandat 2020.087 kb on + strandat 2020.106 kb on + strandat 2020.106 kb on + strandat 2020.106 kb on + strandat 2020.106 kb on + strandat 2020.186 kb on + strandat 2020.200 kb on + strandat 2020.208 kb on - strandat 2020.208 kb on - strandat 2020.292 kb on + strandat 2020.305 kb on + strandat 2020.311 kb on + strandat 2020.387 kb on + strand, within MPMX20_01925at 2020.414 kb on - strand, within MPMX20_01925at 2020.452 kb on + strand, within MPMX20_01925at 2020.466 kb on + strand, within MPMX20_01925at 2020.474 kb on - strand, within MPMX20_01925at 2020.501 kb on + strand, within MPMX20_01925at 2020.519 kb on + strand, within MPMX20_01925at 2020.563 kb on + strand, within MPMX20_01925at 2020.634 kb on + strand, within MPMX20_01925at 2020.644 kb on + strand, within MPMX20_01925at 2020.652 kb on - strand, within MPMX20_01925at 2020.771 kb on + strand, within MPMX20_01925at 2020.787 kb on + strand, within MPMX20_01925at 2020.808 kb on - strand, within MPMX20_01925at 2020.815 kb on + strand, within MPMX20_01925at 2020.824 kb on - strand, within MPMX20_01925at 2020.922 kb on - strand, within MPMX20_01925at 2020.927 kb on + strand, within MPMX20_01925at 2020.927 kb on + strand, within MPMX20_01925at 2020.927 kb on + strand, within MPMX20_01925at 2020.947 kb on + strand, within MPMX20_01925at 2021.100 kb on - strand, within MPMX20_01925at 2021.159 kb on + strand, within MPMX20_01925at 2021.165 kb on + strand, within MPMX20_01925at 2021.173 kb on + strand, within MPMX20_01925at 2021.180 kb on - strand, within MPMX20_01925at 2021.193 kb on - strand, within MPMX20_01925at 2021.258 kb on + strandat 2021.267 kb on - strandat 2021.295 kb on + strandat 2021.295 kb on + strandat 2021.295 kb on + strandat 2021.295 kb on + strandat 2021.295 kb on + strandat 2021.303 kb on - strandat 2021.303 kb on - strandat 2021.303 kb on - strandat 2021.414 kb on + strandat 2021.496 kb on + strandat 2021.504 kb on - strandat 2021.504 kb on - strandat 2021.504 kb on - strandat 2021.504 kb on - strandat 2021.504 kb on - strandat 2021.549 kb on + strandat 2021.579 kb on + strandat 2021.587 kb on - strandat 2021.595 kb on - strandat 2021.762 kb on - strandat 2021.822 kb on - strandat 2021.834 kb on + strand, within MPMX20_01926at 2021.841 kb on + strand, within MPMX20_01926at 2021.914 kb on - strand, within MPMX20_01926at 2021.927 kb on - strand, within MPMX20_01926at 2021.927 kb on - strand, within MPMX20_01926at 2021.933 kb on - strand, within MPMX20_01926at 2021.945 kb on + strand, within MPMX20_01926at 2021.996 kb on + strand, within MPMX20_01926at 2021.996 kb on - strand, within MPMX20_01926at 2022.085 kb on - strand, within MPMX20_01926at 2022.090 kb on - strand, within MPMX20_01926at 2022.225 kb on - strand, within MPMX20_01926at 2022.239 kb on + strand, within MPMX20_01926at 2022.247 kb on - strand, within MPMX20_01926at 2022.247 kb on - strand, within MPMX20_01926at 2022.283 kb on + strand, within MPMX20_01926at 2022.283 kb on + strand, within MPMX20_01926at 2022.283 kb on + strand, within MPMX20_01926at 2022.291 kb on - strand, within MPMX20_01926

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,019,220 - MPMX20_01924 0.72 +0.5
2,019,236 - MPMX20_01924 0.73 -0.6
2,019,272 + MPMX20_01924 0.74 +0.4
2,019,286 - MPMX20_01924 0.75 +0.8
2,019,310 + MPMX20_01924 0.76 -0.1
2,019,315 + MPMX20_01924 0.76 +2.7
2,019,323 - MPMX20_01924 0.76 -1.9
2,019,331 - MPMX20_01924 0.77 -0.7
2,019,475 - MPMX20_01924 0.83 -0.5
2,019,502 - MPMX20_01924 0.84 -0.7
2,019,524 - MPMX20_01924 0.85 -1.0
2,019,541 - MPMX20_01924 0.86 -0.6
2,019,577 + MPMX20_01924 0.87 +0.1
2,019,581 - MPMX20_01924 0.87 -0.0
2,019,591 - MPMX20_01924 0.88 +0.6
2,019,591 - MPMX20_01924 0.88 +0.8
2,019,638 - MPMX20_01924 0.90 +0.1
2,019,684 + +1.0
2,019,684 + -0.8
2,019,684 + -0.5
2,019,684 + +0.6
2,019,684 + +0.1
2,019,684 + -1.0
2,019,684 + +0.3
2,019,684 + +0.2
2,019,692 - -0.9
2,019,692 - -0.3
2,019,692 - -0.1
2,019,692 - -1.3
2,019,766 + -0.0
2,019,805 - -1.4
2,019,921 + -1.6
2,019,921 + -0.0
2,019,924 - +0.1
2,019,925 - +0.2
2,019,929 - +0.1
2,019,929 - -2.4
2,019,929 - -0.1
2,019,929 - +0.0
2,020,030 + +1.0
2,020,087 + -0.8
2,020,106 + -0.4
2,020,106 + +0.8
2,020,106 + -0.7
2,020,106 + -2.4
2,020,186 + -2.9
2,020,200 + -0.5
2,020,208 - +1.5
2,020,208 - -0.5
2,020,292 + +0.3
2,020,305 + -1.4
2,020,311 + +0.9
2,020,387 + MPMX20_01925 0.16 -1.3
2,020,414 - MPMX20_01925 0.19 -0.3
2,020,452 + MPMX20_01925 0.22 -1.0
2,020,466 + MPMX20_01925 0.23 +2.9
2,020,474 - MPMX20_01925 0.24 +0.1
2,020,501 + MPMX20_01925 0.27 -0.7
2,020,519 + MPMX20_01925 0.28 -0.7
2,020,563 + MPMX20_01925 0.32 -2.2
2,020,634 + MPMX20_01925 0.38 -1.4
2,020,644 + MPMX20_01925 0.39 +0.8
2,020,652 - MPMX20_01925 0.40 -0.2
2,020,771 + MPMX20_01925 0.51 +0.1
2,020,787 + MPMX20_01925 0.52 -1.5
2,020,808 - MPMX20_01925 0.54 +0.4
2,020,815 + MPMX20_01925 0.55 -1.0
2,020,824 - MPMX20_01925 0.55 +0.0
2,020,922 - MPMX20_01925 0.64 -1.5
2,020,927 + MPMX20_01925 0.65 +1.0
2,020,927 + MPMX20_01925 0.65 +0.6
2,020,927 + MPMX20_01925 0.65 +0.6
2,020,947 + MPMX20_01925 0.66 -0.9
2,021,100 - MPMX20_01925 0.80 +1.0
2,021,159 + MPMX20_01925 0.85 -0.4
2,021,165 + MPMX20_01925 0.86 -0.0
2,021,173 + MPMX20_01925 0.87 -0.2
2,021,180 - MPMX20_01925 0.87 +0.5
2,021,193 - MPMX20_01925 0.89 +0.2
2,021,258 + +1.4
2,021,267 - -0.4
2,021,295 + +0.5
2,021,295 + +2.0
2,021,295 + +0.6
2,021,295 + -0.0
2,021,295 + +1.0
2,021,303 - -0.0
2,021,303 - +0.2
2,021,303 - +0.5
2,021,414 + -1.5
2,021,496 + -1.2
2,021,504 - -0.3
2,021,504 - -1.2
2,021,504 - +0.0
2,021,504 - -0.9
2,021,504 - -2.3
2,021,549 + -2.0
2,021,579 + -1.0
2,021,587 - -1.6
2,021,595 - -1.0
2,021,762 - -0.9
2,021,822 - -0.0
2,021,834 + MPMX20_01926 0.10 -1.0
2,021,841 + MPMX20_01926 0.11 +0.0
2,021,914 - MPMX20_01926 0.13 -0.0
2,021,927 - MPMX20_01926 0.13 -1.0
2,021,927 - MPMX20_01926 0.13 -1.9
2,021,933 - MPMX20_01926 0.14 -1.5
2,021,945 + MPMX20_01926 0.14 -1.2
2,021,996 + MPMX20_01926 0.16 -0.0
2,021,996 - MPMX20_01926 0.16 -1.2
2,022,085 - MPMX20_01926 0.19 -0.0
2,022,090 - MPMX20_01926 0.19 -2.6
2,022,225 - MPMX20_01926 0.23 -1.9
2,022,239 + MPMX20_01926 0.24 +0.8
2,022,247 - MPMX20_01926 0.24 -1.6
2,022,247 - MPMX20_01926 0.24 -0.2
2,022,283 + MPMX20_01926 0.25 -1.6
2,022,283 + MPMX20_01926 0.25 -0.4
2,022,283 + MPMX20_01926 0.25 -1.3
2,022,291 - MPMX20_01926 0.25 -1.3

Or see this region's nucleotide sequence