Experiment: 0.1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01924 and MPMX20_01925 are separated by 321 nucleotides MPMX20_01925 and MPMX20_01926 are separated by 197 nucleotides
MPMX20_01924: MPMX20_01924 - Beta-xylosidase, at 2,017,508 to 2,019,883
_01924
MPMX20_01925: MPMX20_01925 - Putative transport protein YdiK, at 2,020,205 to 2,021,320
_01925
MPMX20_01926: MPMX20_01926 - hypothetical protein, at 2,021,518 to 2,024,574
_01926
Position (kb)
2020
2021
2022 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2019.220 kb on - strand, within MPMX20_01924 at 2019.236 kb on - strand, within MPMX20_01924 at 2019.272 kb on + strand, within MPMX20_01924 at 2019.286 kb on - strand, within MPMX20_01924 at 2019.310 kb on + strand, within MPMX20_01924 at 2019.315 kb on + strand, within MPMX20_01924 at 2019.323 kb on - strand, within MPMX20_01924 at 2019.331 kb on - strand, within MPMX20_01924 at 2019.475 kb on - strand, within MPMX20_01924 at 2019.502 kb on - strand, within MPMX20_01924 at 2019.524 kb on - strand, within MPMX20_01924 at 2019.541 kb on - strand, within MPMX20_01924 at 2019.577 kb on + strand, within MPMX20_01924 at 2019.581 kb on - strand, within MPMX20_01924 at 2019.591 kb on - strand, within MPMX20_01924 at 2019.591 kb on - strand, within MPMX20_01924 at 2019.638 kb on - strand, within MPMX20_01924 at 2019.684 kb on + strand at 2019.684 kb on + strand at 2019.684 kb on + strand at 2019.684 kb on + strand at 2019.684 kb on + strand at 2019.684 kb on + strand at 2019.684 kb on + strand at 2019.684 kb on + strand at 2019.692 kb on - strand at 2019.692 kb on - strand at 2019.692 kb on - strand at 2019.692 kb on - strand at 2019.766 kb on + strand at 2019.805 kb on - strand at 2019.921 kb on + strand at 2019.921 kb on + strand at 2019.924 kb on - strand at 2019.925 kb on - strand at 2019.929 kb on - strand at 2019.929 kb on - strand at 2019.929 kb on - strand at 2019.929 kb on - strand at 2020.030 kb on + strand at 2020.087 kb on + strand at 2020.106 kb on + strand at 2020.106 kb on + strand at 2020.106 kb on + strand at 2020.106 kb on + strand at 2020.186 kb on + strand at 2020.200 kb on + strand at 2020.208 kb on - strand at 2020.208 kb on - strand at 2020.292 kb on + strand at 2020.305 kb on + strand at 2020.311 kb on + strand at 2020.387 kb on + strand, within MPMX20_01925 at 2020.414 kb on - strand, within MPMX20_01925 at 2020.452 kb on + strand, within MPMX20_01925 at 2020.466 kb on + strand, within MPMX20_01925 at 2020.474 kb on - strand, within MPMX20_01925 at 2020.501 kb on + strand, within MPMX20_01925 at 2020.519 kb on + strand, within MPMX20_01925 at 2020.563 kb on + strand, within MPMX20_01925 at 2020.634 kb on + strand, within MPMX20_01925 at 2020.644 kb on + strand, within MPMX20_01925 at 2020.652 kb on - strand, within MPMX20_01925 at 2020.771 kb on + strand, within MPMX20_01925 at 2020.787 kb on + strand, within MPMX20_01925 at 2020.808 kb on - strand, within MPMX20_01925 at 2020.815 kb on + strand, within MPMX20_01925 at 2020.824 kb on - strand, within MPMX20_01925 at 2020.922 kb on - strand, within MPMX20_01925 at 2020.927 kb on + strand, within MPMX20_01925 at 2020.927 kb on + strand, within MPMX20_01925 at 2020.927 kb on + strand, within MPMX20_01925 at 2020.947 kb on + strand, within MPMX20_01925 at 2021.100 kb on - strand, within MPMX20_01925 at 2021.159 kb on + strand, within MPMX20_01925 at 2021.165 kb on + strand, within MPMX20_01925 at 2021.173 kb on + strand, within MPMX20_01925 at 2021.180 kb on - strand, within MPMX20_01925 at 2021.193 kb on - strand, within MPMX20_01925 at 2021.258 kb on + strand at 2021.267 kb on - strand at 2021.295 kb on + strand at 2021.295 kb on + strand at 2021.295 kb on + strand at 2021.295 kb on + strand at 2021.295 kb on + strand at 2021.303 kb on - strand at 2021.303 kb on - strand at 2021.303 kb on - strand at 2021.414 kb on + strand at 2021.496 kb on + strand at 2021.504 kb on - strand at 2021.504 kb on - strand at 2021.504 kb on - strand at 2021.504 kb on - strand at 2021.504 kb on - strand at 2021.549 kb on + strand at 2021.579 kb on + strand at 2021.587 kb on - strand at 2021.595 kb on - strand at 2021.762 kb on - strand at 2021.822 kb on - strand at 2021.834 kb on + strand, within MPMX20_01926 at 2021.841 kb on + strand, within MPMX20_01926 at 2021.914 kb on - strand, within MPMX20_01926 at 2021.927 kb on - strand, within MPMX20_01926 at 2021.927 kb on - strand, within MPMX20_01926 at 2021.933 kb on - strand, within MPMX20_01926 at 2021.945 kb on + strand, within MPMX20_01926 at 2021.996 kb on + strand, within MPMX20_01926 at 2021.996 kb on - strand, within MPMX20_01926 at 2022.085 kb on - strand, within MPMX20_01926 at 2022.090 kb on - strand, within MPMX20_01926 at 2022.225 kb on - strand, within MPMX20_01926 at 2022.239 kb on + strand, within MPMX20_01926 at 2022.247 kb on - strand, within MPMX20_01926 at 2022.247 kb on - strand, within MPMX20_01926 at 2022.283 kb on + strand, within MPMX20_01926 at 2022.283 kb on + strand, within MPMX20_01926 at 2022.283 kb on + strand, within MPMX20_01926 at 2022.291 kb on - strand, within MPMX20_01926
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,019,220 - MPMX20_01924 0.72 +0.5 2,019,236 - MPMX20_01924 0.73 -0.6 2,019,272 + MPMX20_01924 0.74 +0.4 2,019,286 - MPMX20_01924 0.75 +0.8 2,019,310 + MPMX20_01924 0.76 -0.1 2,019,315 + MPMX20_01924 0.76 +2.7 2,019,323 - MPMX20_01924 0.76 -1.9 2,019,331 - MPMX20_01924 0.77 -0.7 2,019,475 - MPMX20_01924 0.83 -0.5 2,019,502 - MPMX20_01924 0.84 -0.7 2,019,524 - MPMX20_01924 0.85 -1.0 2,019,541 - MPMX20_01924 0.86 -0.6 2,019,577 + MPMX20_01924 0.87 +0.1 2,019,581 - MPMX20_01924 0.87 -0.0 2,019,591 - MPMX20_01924 0.88 +0.6 2,019,591 - MPMX20_01924 0.88 +0.8 2,019,638 - MPMX20_01924 0.90 +0.1 2,019,684 + +1.0 2,019,684 + -0.8 2,019,684 + -0.5 2,019,684 + +0.6 2,019,684 + +0.1 2,019,684 + -1.0 2,019,684 + +0.3 2,019,684 + +0.2 2,019,692 - -0.9 2,019,692 - -0.3 2,019,692 - -0.1 2,019,692 - -1.3 2,019,766 + -0.0 2,019,805 - -1.4 2,019,921 + -1.6 2,019,921 + -0.0 2,019,924 - +0.1 2,019,925 - +0.2 2,019,929 - +0.1 2,019,929 - -2.4 2,019,929 - -0.1 2,019,929 - +0.0 2,020,030 + +1.0 2,020,087 + -0.8 2,020,106 + -0.4 2,020,106 + +0.8 2,020,106 + -0.7 2,020,106 + -2.4 2,020,186 + -2.9 2,020,200 + -0.5 2,020,208 - +1.5 2,020,208 - -0.5 2,020,292 + +0.3 2,020,305 + -1.4 2,020,311 + +0.9 2,020,387 + MPMX20_01925 0.16 -1.3 2,020,414 - MPMX20_01925 0.19 -0.3 2,020,452 + MPMX20_01925 0.22 -1.0 2,020,466 + MPMX20_01925 0.23 +2.9 2,020,474 - MPMX20_01925 0.24 +0.1 2,020,501 + MPMX20_01925 0.27 -0.7 2,020,519 + MPMX20_01925 0.28 -0.7 2,020,563 + MPMX20_01925 0.32 -2.2 2,020,634 + MPMX20_01925 0.38 -1.4 2,020,644 + MPMX20_01925 0.39 +0.8 2,020,652 - MPMX20_01925 0.40 -0.2 2,020,771 + MPMX20_01925 0.51 +0.1 2,020,787 + MPMX20_01925 0.52 -1.5 2,020,808 - MPMX20_01925 0.54 +0.4 2,020,815 + MPMX20_01925 0.55 -1.0 2,020,824 - MPMX20_01925 0.55 +0.0 2,020,922 - MPMX20_01925 0.64 -1.5 2,020,927 + MPMX20_01925 0.65 +1.0 2,020,927 + MPMX20_01925 0.65 +0.6 2,020,927 + MPMX20_01925 0.65 +0.6 2,020,947 + MPMX20_01925 0.66 -0.9 2,021,100 - MPMX20_01925 0.80 +1.0 2,021,159 + MPMX20_01925 0.85 -0.4 2,021,165 + MPMX20_01925 0.86 -0.0 2,021,173 + MPMX20_01925 0.87 -0.2 2,021,180 - MPMX20_01925 0.87 +0.5 2,021,193 - MPMX20_01925 0.89 +0.2 2,021,258 + +1.4 2,021,267 - -0.4 2,021,295 + +0.5 2,021,295 + +2.0 2,021,295 + +0.6 2,021,295 + -0.0 2,021,295 + +1.0 2,021,303 - -0.0 2,021,303 - +0.2 2,021,303 - +0.5 2,021,414 + -1.5 2,021,496 + -1.2 2,021,504 - -0.3 2,021,504 - -1.2 2,021,504 - +0.0 2,021,504 - -0.9 2,021,504 - -2.3 2,021,549 + -2.0 2,021,579 + -1.0 2,021,587 - -1.6 2,021,595 - -1.0 2,021,762 - -0.9 2,021,822 - -0.0 2,021,834 + MPMX20_01926 0.10 -1.0 2,021,841 + MPMX20_01926 0.11 +0.0 2,021,914 - MPMX20_01926 0.13 -0.0 2,021,927 - MPMX20_01926 0.13 -1.0 2,021,927 - MPMX20_01926 0.13 -1.9 2,021,933 - MPMX20_01926 0.14 -1.5 2,021,945 + MPMX20_01926 0.14 -1.2 2,021,996 + MPMX20_01926 0.16 -0.0 2,021,996 - MPMX20_01926 0.16 -1.2 2,022,085 - MPMX20_01926 0.19 -0.0 2,022,090 - MPMX20_01926 0.19 -2.6 2,022,225 - MPMX20_01926 0.23 -1.9 2,022,239 + MPMX20_01926 0.24 +0.8 2,022,247 - MPMX20_01926 0.24 -1.6 2,022,247 - MPMX20_01926 0.24 -0.2 2,022,283 + MPMX20_01926 0.25 -1.6 2,022,283 + MPMX20_01926 0.25 -0.4 2,022,283 + MPMX20_01926 0.25 -1.3 2,022,291 - MPMX20_01926 0.25 -1.3
Or see this region's nucleotide sequence