Experiment: M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03635 and MPMX20_03636 are separated by 58 nucleotides MPMX20_03636 and MPMX20_03637 overlap by 1 nucleotides MPMX20_03637 and MPMX20_03638 are separated by 9 nucleotides MPMX20_03638 and MPMX20_03639 are separated by 9 nucleotides
MPMX20_03635: MPMX20_03635 - Inner membrane protein YgbE, at 3,822,700 to 3,823,026
_03635
MPMX20_03636: MPMX20_03636 - Adenylyl-sulfate kinase, at 3,823,085 to 3,823,690
_03636
MPMX20_03637: MPMX20_03637 - Sulfate adenylyltransferase subunit 1, at 3,823,690 to 3,825,114
_03637
MPMX20_03638: MPMX20_03638 - Sulfate adenylyltransferase subunit 2, at 3,825,124 to 3,826,032
_03638
MPMX20_03639: MPMX20_03639 - Siroheme synthase, at 3,826,042 to 3,827,400
_03639
Position (kb)
3823
3824
3825
3826 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6 at 3822.733 kb on + strand, within MPMX20_03635 at 3822.801 kb on + strand, within MPMX20_03635 at 3822.801 kb on + strand, within MPMX20_03635 at 3822.801 kb on + strand, within MPMX20_03635 at 3822.804 kb on - strand, within MPMX20_03635 at 3822.814 kb on - strand, within MPMX20_03635 at 3822.861 kb on - strand, within MPMX20_03635 at 3822.871 kb on - strand, within MPMX20_03635 at 3822.873 kb on + strand, within MPMX20_03635 at 3822.873 kb on + strand, within MPMX20_03635 at 3822.992 kb on - strand, within MPMX20_03635 at 3823.018 kb on + strand at 3823.018 kb on + strand at 3823.062 kb on + strand at 3823.084 kb on + strand at 3823.107 kb on + strand at 3823.112 kb on + strand at 3823.204 kb on - strand, within MPMX20_03636 at 3823.420 kb on + strand, within MPMX20_03636 at 3823.428 kb on - strand, within MPMX20_03636 at 3823.483 kb on - strand, within MPMX20_03636 at 3823.510 kb on + strand, within MPMX20_03636 at 3823.522 kb on + strand, within MPMX20_03636 at 3823.560 kb on + strand, within MPMX20_03636 at 3823.565 kb on + strand, within MPMX20_03636 at 3823.575 kb on + strand, within MPMX20_03636 at 3823.583 kb on - strand, within MPMX20_03636 at 3823.588 kb on + strand, within MPMX20_03636 at 3823.603 kb on - strand, within MPMX20_03636 at 3823.644 kb on - strand at 3823.644 kb on - strand at 3823.644 kb on - strand at 3823.670 kb on + strand at 3823.705 kb on - strand at 3823.784 kb on - strand at 3823.787 kb on + strand at 3823.787 kb on + strand at 3823.787 kb on + strand at 3823.808 kb on - strand at 3823.838 kb on - strand, within MPMX20_03637 at 3823.940 kb on - strand, within MPMX20_03637 at 3823.940 kb on - strand, within MPMX20_03637 at 3823.979 kb on - strand, within MPMX20_03637 at 3823.992 kb on + strand, within MPMX20_03637 at 3823.999 kb on - strand, within MPMX20_03637 at 3824.010 kb on - strand, within MPMX20_03637 at 3824.061 kb on - strand, within MPMX20_03637 at 3824.061 kb on - strand, within MPMX20_03637 at 3824.115 kb on - strand, within MPMX20_03637 at 3824.115 kb on - strand, within MPMX20_03637 at 3824.194 kb on + strand, within MPMX20_03637 at 3824.277 kb on - strand, within MPMX20_03637 at 3824.394 kb on - strand, within MPMX20_03637 at 3824.431 kb on - strand, within MPMX20_03637 at 3824.441 kb on - strand, within MPMX20_03637 at 3824.441 kb on - strand, within MPMX20_03637 at 3824.631 kb on - strand, within MPMX20_03637 at 3824.670 kb on - strand, within MPMX20_03637 at 3824.753 kb on - strand, within MPMX20_03637 at 3824.760 kb on + strand, within MPMX20_03637 at 3824.797 kb on + strand, within MPMX20_03637 at 3824.920 kb on - strand, within MPMX20_03637 at 3824.933 kb on + strand, within MPMX20_03637 at 3824.941 kb on - strand, within MPMX20_03637 at 3825.014 kb on + strand at 3825.014 kb on + strand at 3825.027 kb on - strand at 3825.027 kb on - strand at 3825.161 kb on - strand at 3825.258 kb on + strand, within MPMX20_03638 at 3825.266 kb on - strand, within MPMX20_03638 at 3825.276 kb on - strand, within MPMX20_03638 at 3825.295 kb on + strand, within MPMX20_03638 at 3825.379 kb on + strand, within MPMX20_03638 at 3825.387 kb on - strand, within MPMX20_03638 at 3825.387 kb on - strand, within MPMX20_03638 at 3825.387 kb on - strand, within MPMX20_03638 at 3825.387 kb on - strand, within MPMX20_03638 at 3825.534 kb on + strand, within MPMX20_03638 at 3825.542 kb on - strand, within MPMX20_03638 at 3825.592 kb on - strand, within MPMX20_03638 at 3825.642 kb on - strand, within MPMX20_03638 at 3825.642 kb on - strand, within MPMX20_03638 at 3825.642 kb on - strand, within MPMX20_03638 at 3825.642 kb on - strand, within MPMX20_03638 at 3825.673 kb on + strand, within MPMX20_03638 at 3825.686 kb on - strand, within MPMX20_03638 at 3825.686 kb on - strand, within MPMX20_03638 at 3825.715 kb on + strand, within MPMX20_03638 at 3825.715 kb on + strand, within MPMX20_03638 at 3825.729 kb on + strand, within MPMX20_03638 at 3825.729 kb on + strand, within MPMX20_03638 at 3825.737 kb on - strand, within MPMX20_03638 at 3825.737 kb on - strand, within MPMX20_03638 at 3825.741 kb on + strand, within MPMX20_03638 at 3825.741 kb on + strand, within MPMX20_03638 at 3825.741 kb on + strand, within MPMX20_03638 at 3825.781 kb on + strand, within MPMX20_03638 at 3825.789 kb on - strand, within MPMX20_03638 at 3825.847 kb on - strand, within MPMX20_03638 at 3825.898 kb on + strand, within MPMX20_03638 at 3825.898 kb on + strand, within MPMX20_03638 at 3825.898 kb on + strand, within MPMX20_03638 at 3825.909 kb on + strand, within MPMX20_03638 at 3826.003 kb on + strand at 3826.065 kb on + strand at 3826.066 kb on + strand at 3826.082 kb on - strand at 3826.085 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus megaterium TBS_053 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,822,733 + MPMX20_03635 0.10 +1.4 3,822,801 + MPMX20_03635 0.31 -1.0 3,822,801 + MPMX20_03635 0.31 -1.6 3,822,801 + MPMX20_03635 0.31 -0.5 3,822,804 - MPMX20_03635 0.32 +5.2 3,822,814 - MPMX20_03635 0.35 +1.9 3,822,861 - MPMX20_03635 0.49 -2.1 3,822,871 - MPMX20_03635 0.52 -0.1 3,822,873 + MPMX20_03635 0.53 +6.1 3,822,873 + MPMX20_03635 0.53 -0.2 3,822,992 - MPMX20_03635 0.89 -0.3 3,823,018 + -3.8 3,823,018 + -1.8 3,823,062 + +0.3 3,823,084 + -1.0 3,823,107 + -2.4 3,823,112 + -2.9 3,823,204 - MPMX20_03636 0.20 -1.3 3,823,420 + MPMX20_03636 0.55 -1.6 3,823,428 - MPMX20_03636 0.57 -2.2 3,823,483 - MPMX20_03636 0.66 -1.8 3,823,510 + MPMX20_03636 0.70 -2.8 3,823,522 + MPMX20_03636 0.72 -2.0 3,823,560 + MPMX20_03636 0.78 -2.0 3,823,565 + MPMX20_03636 0.79 -3.3 3,823,575 + MPMX20_03636 0.81 -1.3 3,823,583 - MPMX20_03636 0.82 -2.3 3,823,588 + MPMX20_03636 0.83 -3.8 3,823,603 - MPMX20_03636 0.85 -3.8 3,823,644 - -1.5 3,823,644 - -2.2 3,823,644 - -1.5 3,823,670 + -2.0 3,823,705 - -0.1 3,823,784 - +0.5 3,823,787 + -0.1 3,823,787 + +1.3 3,823,787 + -1.1 3,823,808 - +0.0 3,823,838 - MPMX20_03637 0.10 -2.1 3,823,940 - MPMX20_03637 0.18 -0.1 3,823,940 - MPMX20_03637 0.18 -0.8 3,823,979 - MPMX20_03637 0.20 -1.3 3,823,992 + MPMX20_03637 0.21 -2.2 3,823,999 - MPMX20_03637 0.22 -1.7 3,824,010 - MPMX20_03637 0.22 -1.6 3,824,061 - MPMX20_03637 0.26 +0.5 3,824,061 - MPMX20_03637 0.26 -0.1 3,824,115 - MPMX20_03637 0.30 -1.5 3,824,115 - MPMX20_03637 0.30 -1.3 3,824,194 + MPMX20_03637 0.35 -1.6 3,824,277 - MPMX20_03637 0.41 -0.1 3,824,394 - MPMX20_03637 0.49 +0.3 3,824,431 - MPMX20_03637 0.52 -3.1 3,824,441 - MPMX20_03637 0.53 +0.5 3,824,441 - MPMX20_03637 0.53 -0.2 3,824,631 - MPMX20_03637 0.66 -1.1 3,824,670 - MPMX20_03637 0.69 -2.1 3,824,753 - MPMX20_03637 0.75 -2.6 3,824,760 + MPMX20_03637 0.75 -0.4 3,824,797 + MPMX20_03637 0.78 -2.0 3,824,920 - MPMX20_03637 0.86 -1.5 3,824,933 + MPMX20_03637 0.87 -0.5 3,824,941 - MPMX20_03637 0.88 -1.6 3,825,014 + -2.2 3,825,014 + -0.1 3,825,027 - -0.9 3,825,027 - -1.7 3,825,161 - +0.5 3,825,258 + MPMX20_03638 0.15 -3.9 3,825,266 - MPMX20_03638 0.16 -1.6 3,825,276 - MPMX20_03638 0.17 -1.5 3,825,295 + MPMX20_03638 0.19 -2.6 3,825,379 + MPMX20_03638 0.28 -1.9 3,825,387 - MPMX20_03638 0.29 +0.3 3,825,387 - MPMX20_03638 0.29 -1.7 3,825,387 - MPMX20_03638 0.29 +2.7 3,825,387 - MPMX20_03638 0.29 -1.1 3,825,534 + MPMX20_03638 0.45 -2.0 3,825,542 - MPMX20_03638 0.46 +0.5 3,825,592 - MPMX20_03638 0.51 -2.7 3,825,642 - MPMX20_03638 0.57 -2.6 3,825,642 - MPMX20_03638 0.57 -2.6 3,825,642 - MPMX20_03638 0.57 -2.7 3,825,642 - MPMX20_03638 0.57 -0.4 3,825,673 + MPMX20_03638 0.60 -1.4 3,825,686 - MPMX20_03638 0.62 -1.0 3,825,686 - MPMX20_03638 0.62 -2.3 3,825,715 + MPMX20_03638 0.65 -3.0 3,825,715 + MPMX20_03638 0.65 -1.5 3,825,729 + MPMX20_03638 0.67 -3.3 3,825,729 + MPMX20_03638 0.67 +1.1 3,825,737 - MPMX20_03638 0.67 -2.6 3,825,737 - MPMX20_03638 0.67 -2.2 3,825,741 + MPMX20_03638 0.68 -2.2 3,825,741 + MPMX20_03638 0.68 +1.0 3,825,741 + MPMX20_03638 0.68 -2.9 3,825,781 + MPMX20_03638 0.72 -2.3 3,825,789 - MPMX20_03638 0.73 -2.9 3,825,847 - MPMX20_03638 0.80 -0.6 3,825,898 + MPMX20_03638 0.85 -1.7 3,825,898 + MPMX20_03638 0.85 -1.3 3,825,898 + MPMX20_03638 0.85 -1.0 3,825,909 + MPMX20_03638 0.86 -0.0 3,826,003 + +2.9 3,826,065 + -1.8 3,826,066 + +1.5 3,826,082 - -0.3 3,826,085 + +1.1
Or see this region's nucleotide sequence