Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02150

Experiment: 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02149 and MPMX20_02150 overlap by 11 nucleotidesMPMX20_02150 and MPMX20_02151 overlap by 1 nucleotides MPMX20_02149: MPMX20_02149 - 3-hydroxyadipyl-CoA dehydrogenase, at 2,241,010 to 2,242,437 _02149 MPMX20_02150: MPMX20_02150 - Acyl-coenzyme A thioesterase PaaI, at 2,242,427 to 2,242,849 _02150 MPMX20_02151: MPMX20_02151 - 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase, at 2,242,849 to 2,244,054 _02151 Position (kb) 2242 2243Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2241.565 kb on + strand, within MPMX20_02149at 2241.566 kb on + strand, within MPMX20_02149at 2241.574 kb on - strand, within MPMX20_02149at 2241.605 kb on + strand, within MPMX20_02149at 2241.631 kb on - strand, within MPMX20_02149at 2241.706 kb on - strand, within MPMX20_02149at 2241.754 kb on - strand, within MPMX20_02149at 2241.869 kb on + strand, within MPMX20_02149at 2241.919 kb on - strand, within MPMX20_02149at 2242.087 kb on - strand, within MPMX20_02149at 2242.257 kb on - strand, within MPMX20_02149at 2242.307 kb on - strandat 2242.367 kb on - strandat 2242.383 kb on + strandat 2242.388 kb on + strandat 2242.419 kb on + strandat 2242.419 kb on - strandat 2242.419 kb on - strandat 2242.453 kb on - strandat 2242.634 kb on + strand, within MPMX20_02150at 2242.635 kb on + strand, within MPMX20_02150at 2242.655 kb on + strand, within MPMX20_02150at 2242.723 kb on + strand, within MPMX20_02150at 2242.731 kb on - strand, within MPMX20_02150at 2242.759 kb on - strand, within MPMX20_02150at 2242.838 kb on + strandat 2242.914 kb on - strandat 2242.937 kb on + strandat 2242.950 kb on - strandat 2243.087 kb on - strand, within MPMX20_02151at 2243.097 kb on - strand, within MPMX20_02151at 2243.120 kb on + strand, within MPMX20_02151at 2243.128 kb on - strand, within MPMX20_02151at 2243.154 kb on + strand, within MPMX20_02151at 2243.229 kb on + strand, within MPMX20_02151at 2243.237 kb on - strand, within MPMX20_02151at 2243.286 kb on - strand, within MPMX20_02151at 2243.423 kb on + strand, within MPMX20_02151at 2243.526 kb on - strand, within MPMX20_02151at 2243.548 kb on - strand, within MPMX20_02151at 2243.606 kb on + strand, within MPMX20_02151at 2243.606 kb on + strand, within MPMX20_02151at 2243.614 kb on - strand, within MPMX20_02151at 2243.666 kb on + strand, within MPMX20_02151at 2243.672 kb on + strand, within MPMX20_02151at 2243.680 kb on - strand, within MPMX20_02151at 2243.733 kb on - strand, within MPMX20_02151at 2243.743 kb on - strand, within MPMX20_02151at 2243.743 kb on - strand, within MPMX20_02151at 2243.804 kb on + strand, within MPMX20_02151

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Chryseobacterium geocarphospharae CO6 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,241,565 + MPMX20_02149 0.39 -2.0
2,241,566 + MPMX20_02149 0.39 -0.9
2,241,574 - MPMX20_02149 0.39 -1.7
2,241,605 + MPMX20_02149 0.42 -3.9
2,241,631 - MPMX20_02149 0.43 -2.2
2,241,706 - MPMX20_02149 0.49 -0.7
2,241,754 - MPMX20_02149 0.52 -1.9
2,241,869 + MPMX20_02149 0.60 -1.7
2,241,919 - MPMX20_02149 0.64 -1.9
2,242,087 - MPMX20_02149 0.75 +0.3
2,242,257 - MPMX20_02149 0.87 -1.1
2,242,307 - -2.6
2,242,367 - -2.2
2,242,383 + -2.0
2,242,388 + -0.4
2,242,419 + -0.5
2,242,419 - -0.0
2,242,419 - -2.0
2,242,453 - -1.3
2,242,634 + MPMX20_02150 0.49 -0.4
2,242,635 + MPMX20_02150 0.49 -1.0
2,242,655 + MPMX20_02150 0.54 -1.2
2,242,723 + MPMX20_02150 0.70 -1.0
2,242,731 - MPMX20_02150 0.72 -0.2
2,242,759 - MPMX20_02150 0.78 -0.2
2,242,838 + -1.8
2,242,914 - -0.2
2,242,937 + -0.2
2,242,950 - -0.5
2,243,087 - MPMX20_02151 0.20 -0.5
2,243,097 - MPMX20_02151 0.21 -0.4
2,243,120 + MPMX20_02151 0.22 -1.7
2,243,128 - MPMX20_02151 0.23 -1.3
2,243,154 + MPMX20_02151 0.25 -0.0
2,243,229 + MPMX20_02151 0.32 -2.3
2,243,237 - MPMX20_02151 0.32 -0.7
2,243,286 - MPMX20_02151 0.36 -0.0
2,243,423 + MPMX20_02151 0.48 +0.5
2,243,526 - MPMX20_02151 0.56 +0.1
2,243,548 - MPMX20_02151 0.58 +2.1
2,243,606 + MPMX20_02151 0.63 -1.7
2,243,606 + MPMX20_02151 0.63 -0.2
2,243,614 - MPMX20_02151 0.63 -0.8
2,243,666 + MPMX20_02151 0.68 +0.5
2,243,672 + MPMX20_02151 0.68 -0.7
2,243,680 - MPMX20_02151 0.69 -2.0
2,243,733 - MPMX20_02151 0.73 -1.0
2,243,743 - MPMX20_02151 0.74 -1.7
2,243,743 - MPMX20_02151 0.74 -0.0
2,243,804 + MPMX20_02151 0.79 -0.3

Or see this region's nucleotide sequence