Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01754

Experiment: 1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01751 and MPMX20_01752 are separated by 157 nucleotidesMPMX20_01752 and MPMX20_01753 are separated by 3 nucleotidesMPMX20_01753 and MPMX20_01754 are separated by 11 nucleotidesMPMX20_01754 and MPMX20_01755 are separated by 26 nucleotides MPMX20_01751: MPMX20_01751 - Flagella basal body P-ring formation protein FlgA, at 1,843,572 to 1,844,231 _01751 MPMX20_01752: MPMX20_01752 - Flagellar basal body rod protein FlgB, at 1,844,389 to 1,844,805 _01752 MPMX20_01753: MPMX20_01753 - Flagellar basal-body rod protein FlgC, at 1,844,809 to 1,845,213 _01753 MPMX20_01754: MPMX20_01754 - Basal-body rod modification protein FlgD, at 1,845,225 to 1,845,935 _01754 MPMX20_01755: MPMX20_01755 - Flagellar hook protein FlgE, at 1,845,962 to 1,847,170 _01755 Position (kb) 1845 1846Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1844.237 kb on + strandat 1844.245 kb on - strandat 1844.346 kb on + strandat 1844.346 kb on + strandat 1844.346 kb on + strandat 1844.346 kb on + strandat 1844.347 kb on - strandat 1844.389 kb on - strandat 1844.408 kb on - strandat 1844.431 kb on + strand, within MPMX20_01752at 1844.560 kb on + strand, within MPMX20_01752at 1844.584 kb on + strand, within MPMX20_01752at 1844.616 kb on + strand, within MPMX20_01752at 1844.624 kb on - strand, within MPMX20_01752at 1844.624 kb on - strand, within MPMX20_01752at 1844.624 kb on - strand, within MPMX20_01752at 1844.664 kb on + strand, within MPMX20_01752at 1844.664 kb on + strand, within MPMX20_01752at 1844.733 kb on + strand, within MPMX20_01752at 1844.743 kb on + strand, within MPMX20_01752at 1844.743 kb on + strand, within MPMX20_01752at 1844.743 kb on + strand, within MPMX20_01752at 1844.743 kb on + strand, within MPMX20_01752at 1844.743 kb on + strand, within MPMX20_01752at 1844.743 kb on + strand, within MPMX20_01752at 1844.743 kb on + strand, within MPMX20_01752at 1844.751 kb on - strand, within MPMX20_01752at 1844.751 kb on - strand, within MPMX20_01752at 1844.751 kb on - strand, within MPMX20_01752at 1844.794 kb on - strandat 1844.848 kb on - strandat 1844.859 kb on + strand, within MPMX20_01753at 1844.859 kb on + strand, within MPMX20_01753at 1844.859 kb on + strand, within MPMX20_01753at 1844.866 kb on + strand, within MPMX20_01753at 1844.866 kb on + strand, within MPMX20_01753at 1844.867 kb on - strand, within MPMX20_01753at 1844.867 kb on - strand, within MPMX20_01753at 1844.867 kb on - strand, within MPMX20_01753at 1844.868 kb on + strand, within MPMX20_01753at 1844.874 kb on - strand, within MPMX20_01753at 1844.928 kb on + strand, within MPMX20_01753at 1844.936 kb on - strand, within MPMX20_01753at 1844.936 kb on - strand, within MPMX20_01753at 1844.936 kb on - strand, within MPMX20_01753at 1844.936 kb on - strand, within MPMX20_01753at 1845.130 kb on + strand, within MPMX20_01753at 1845.160 kb on + strand, within MPMX20_01753at 1845.160 kb on + strand, within MPMX20_01753at 1845.160 kb on + strand, within MPMX20_01753at 1845.162 kb on + strand, within MPMX20_01753at 1845.162 kb on + strand, within MPMX20_01753at 1845.162 kb on + strand, within MPMX20_01753at 1845.162 kb on + strand, within MPMX20_01753at 1845.162 kb on + strand, within MPMX20_01753at 1845.170 kb on - strand, within MPMX20_01753at 1845.170 kb on - strand, within MPMX20_01753at 1845.186 kb on + strandat 1845.208 kb on - strandat 1845.425 kb on + strand, within MPMX20_01754at 1845.433 kb on - strand, within MPMX20_01754at 1845.433 kb on - strand, within MPMX20_01754at 1845.452 kb on + strand, within MPMX20_01754at 1845.548 kb on - strand, within MPMX20_01754at 1845.670 kb on + strand, within MPMX20_01754at 1845.670 kb on + strand, within MPMX20_01754at 1845.675 kb on + strand, within MPMX20_01754at 1845.675 kb on + strand, within MPMX20_01754at 1845.675 kb on + strand, within MPMX20_01754at 1845.678 kb on - strand, within MPMX20_01754at 1845.683 kb on - strand, within MPMX20_01754at 1845.683 kb on - strand, within MPMX20_01754at 1845.685 kb on + strand, within MPMX20_01754at 1845.701 kb on + strand, within MPMX20_01754at 1845.701 kb on + strand, within MPMX20_01754at 1845.711 kb on + strand, within MPMX20_01754at 1845.721 kb on + strand, within MPMX20_01754at 1845.722 kb on - strand, within MPMX20_01754at 1845.729 kb on - strand, within MPMX20_01754at 1845.842 kb on + strand, within MPMX20_01754at 1845.842 kb on + strand, within MPMX20_01754at 1845.850 kb on - strand, within MPMX20_01754at 1845.896 kb on + strandat 1845.930 kb on + strandat 1845.937 kb on + strandat 1845.938 kb on - strandat 1845.945 kb on - strandat 1845.966 kb on - strandat 1846.095 kb on + strand, within MPMX20_01755at 1846.141 kb on - strand, within MPMX20_01755at 1846.178 kb on - strand, within MPMX20_01755at 1846.225 kb on + strand, within MPMX20_01755at 1846.243 kb on - strand, within MPMX20_01755at 1846.243 kb on - strand, within MPMX20_01755at 1846.245 kb on + strand, within MPMX20_01755at 1846.293 kb on - strand, within MPMX20_01755at 1846.343 kb on + strand, within MPMX20_01755at 1846.343 kb on + strand, within MPMX20_01755at 1846.351 kb on - strand, within MPMX20_01755at 1846.361 kb on - strand, within MPMX20_01755at 1846.438 kb on - strand, within MPMX20_01755at 1846.472 kb on - strand, within MPMX20_01755at 1846.482 kb on - strand, within MPMX20_01755at 1846.528 kb on + strand, within MPMX20_01755at 1846.542 kb on + strand, within MPMX20_01755at 1846.582 kb on + strand, within MPMX20_01755at 1846.590 kb on - strand, within MPMX20_01755at 1846.592 kb on + strand, within MPMX20_01755at 1846.650 kb on + strand, within MPMX20_01755at 1846.651 kb on - strand, within MPMX20_01755at 1846.667 kb on + strand, within MPMX20_01755at 1846.675 kb on - strand, within MPMX20_01755at 1846.707 kb on + strand, within MPMX20_01755at 1846.768 kb on - strand, within MPMX20_01755at 1846.884 kb on + strand, within MPMX20_01755at 1846.890 kb on - strand, within MPMX20_01755at 1846.891 kb on - strand, within MPMX20_01755at 1846.931 kb on + strand, within MPMX20_01755at 1846.931 kb on + strand, within MPMX20_01755

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Bacillus zanthoxyli TBS_109 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,844,237 + +0.0
1,844,245 - +1.0
1,844,346 + -1.0
1,844,346 + +1.0
1,844,346 + +1.3
1,844,346 + -0.1
1,844,347 - -0.0
1,844,389 - +0.5
1,844,408 - +0.0
1,844,431 + MPMX20_01752 0.10 -1.3
1,844,560 + MPMX20_01752 0.41 +0.9
1,844,584 + MPMX20_01752 0.47 -0.0
1,844,616 + MPMX20_01752 0.54 +0.5
1,844,624 - MPMX20_01752 0.56 +3.0
1,844,624 - MPMX20_01752 0.56 -0.2
1,844,624 - MPMX20_01752 0.56 +3.8
1,844,664 + MPMX20_01752 0.66 -0.1
1,844,664 + MPMX20_01752 0.66 +0.4
1,844,733 + MPMX20_01752 0.82 +1.4
1,844,743 + MPMX20_01752 0.85 -0.1
1,844,743 + MPMX20_01752 0.85 +0.7
1,844,743 + MPMX20_01752 0.85 +1.6
1,844,743 + MPMX20_01752 0.85 +2.2
1,844,743 + MPMX20_01752 0.85 +1.4
1,844,743 + MPMX20_01752 0.85 -0.3
1,844,743 + MPMX20_01752 0.85 -1.8
1,844,751 - MPMX20_01752 0.87 +3.4
1,844,751 - MPMX20_01752 0.87 +0.6
1,844,751 - MPMX20_01752 0.87 -1.3
1,844,794 - +0.3
1,844,848 - -0.7
1,844,859 + MPMX20_01753 0.12 -0.3
1,844,859 + MPMX20_01753 0.12 -0.2
1,844,859 + MPMX20_01753 0.12 +1.9
1,844,866 + MPMX20_01753 0.14 +0.2
1,844,866 + MPMX20_01753 0.14 +0.6
1,844,867 - MPMX20_01753 0.14 +1.4
1,844,867 - MPMX20_01753 0.14 +0.6
1,844,867 - MPMX20_01753 0.14 +2.0
1,844,868 + MPMX20_01753 0.15 +1.6
1,844,874 - MPMX20_01753 0.16 +0.9
1,844,928 + MPMX20_01753 0.29 -0.0
1,844,936 - MPMX20_01753 0.31 +1.2
1,844,936 - MPMX20_01753 0.31 -0.4
1,844,936 - MPMX20_01753 0.31 -1.2
1,844,936 - MPMX20_01753 0.31 -0.3
1,845,130 + MPMX20_01753 0.79 +0.0
1,845,160 + MPMX20_01753 0.87 +0.8
1,845,160 + MPMX20_01753 0.87 -0.7
1,845,160 + MPMX20_01753 0.87 +1.2
1,845,162 + MPMX20_01753 0.87 -0.2
1,845,162 + MPMX20_01753 0.87 +1.6
1,845,162 + MPMX20_01753 0.87 +0.2
1,845,162 + MPMX20_01753 0.87 +0.2
1,845,162 + MPMX20_01753 0.87 -0.5
1,845,170 - MPMX20_01753 0.89 +1.0
1,845,170 - MPMX20_01753 0.89 -0.6
1,845,186 + -0.3
1,845,208 - +2.0
1,845,425 + MPMX20_01754 0.28 +1.7
1,845,433 - MPMX20_01754 0.29 +1.6
1,845,433 - MPMX20_01754 0.29 +0.5
1,845,452 + MPMX20_01754 0.32 +0.7
1,845,548 - MPMX20_01754 0.45 +0.8
1,845,670 + MPMX20_01754 0.63 +0.4
1,845,670 + MPMX20_01754 0.63 -0.1
1,845,675 + MPMX20_01754 0.63 +0.6
1,845,675 + MPMX20_01754 0.63 +0.6
1,845,675 + MPMX20_01754 0.63 +0.6
1,845,678 - MPMX20_01754 0.64 +0.7
1,845,683 - MPMX20_01754 0.64 +3.7
1,845,683 - MPMX20_01754 0.64 -0.8
1,845,685 + MPMX20_01754 0.65 +2.6
1,845,701 + MPMX20_01754 0.67 +0.1
1,845,701 + MPMX20_01754 0.67 -0.1
1,845,711 + MPMX20_01754 0.68 +0.1
1,845,721 + MPMX20_01754 0.70 +0.0
1,845,722 - MPMX20_01754 0.70 -0.0
1,845,729 - MPMX20_01754 0.71 -2.3
1,845,842 + MPMX20_01754 0.87 +1.1
1,845,842 + MPMX20_01754 0.87 +0.5
1,845,850 - MPMX20_01754 0.88 +0.9
1,845,896 + -0.8
1,845,930 + -0.0
1,845,937 + +0.2
1,845,938 - +0.5
1,845,945 - +0.1
1,845,966 - -0.0
1,846,095 + MPMX20_01755 0.11 +0.6
1,846,141 - MPMX20_01755 0.15 +0.4
1,846,178 - MPMX20_01755 0.18 +0.9
1,846,225 + MPMX20_01755 0.22 +0.3
1,846,243 - MPMX20_01755 0.23 -2.3
1,846,243 - MPMX20_01755 0.23 +1.6
1,846,245 + MPMX20_01755 0.23 -1.6
1,846,293 - MPMX20_01755 0.27 -0.3
1,846,343 + MPMX20_01755 0.32 -0.4
1,846,343 + MPMX20_01755 0.32 -0.7
1,846,351 - MPMX20_01755 0.32 +0.2
1,846,361 - MPMX20_01755 0.33 +1.2
1,846,438 - MPMX20_01755 0.39 +1.5
1,846,472 - MPMX20_01755 0.42 +1.6
1,846,482 - MPMX20_01755 0.43 -0.1
1,846,528 + MPMX20_01755 0.47 +0.4
1,846,542 + MPMX20_01755 0.48 -0.4
1,846,582 + MPMX20_01755 0.51 +0.3
1,846,590 - MPMX20_01755 0.52 +0.6
1,846,592 + MPMX20_01755 0.52 +1.6
1,846,650 + MPMX20_01755 0.57 +0.7
1,846,651 - MPMX20_01755 0.57 +0.5
1,846,667 + MPMX20_01755 0.58 +0.5
1,846,675 - MPMX20_01755 0.59 +1.1
1,846,707 + MPMX20_01755 0.62 +1.2
1,846,768 - MPMX20_01755 0.67 +0.2
1,846,884 + MPMX20_01755 0.76 -1.1
1,846,890 - MPMX20_01755 0.77 +2.6
1,846,891 - MPMX20_01755 0.77 +0.9
1,846,931 + MPMX20_01755 0.80 +0.3
1,846,931 + MPMX20_01755 0.80 -0.0

Or see this region's nucleotide sequence