Experiment: TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04066 and MPMX20_04067 are separated by 180 nucleotides MPMX20_04067 and MPMX20_04068 are separated by 108 nucleotides
MPMX20_04066: MPMX20_04066 - ATP-dependent RNA helicase DeaD, at 4,262,596 to 4,264,500
_04066
MPMX20_04067: MPMX20_04067 - Lipoprotein NlpI, at 4,264,681 to 4,265,565
_04067
MPMX20_04068: MPMX20_04068 - Polyribonucleotide nucleotidyltransferase, at 4,265,674 to 4,267,812
_04068
Position (kb)
4264
4265
4266 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8
9
10 at 4264.629 kb on - strand at 4264.706 kb on - strand at 4264.713 kb on - strand at 4264.912 kb on - strand, within MPMX20_04067 at 4265.146 kb on - strand, within MPMX20_04067 at 4265.146 kb on - strand, within MPMX20_04067 at 4265.146 kb on - strand, within MPMX20_04067 at 4265.146 kb on - strand, within MPMX20_04067 at 4265.146 kb on - strand, within MPMX20_04067 at 4265.146 kb on - strand, within MPMX20_04067 at 4265.369 kb on + strand, within MPMX20_04067 at 4265.377 kb on - strand, within MPMX20_04067 at 4265.377 kb on - strand, within MPMX20_04067 at 4265.377 kb on - strand, within MPMX20_04067 at 4265.396 kb on + strand, within MPMX20_04067 at 4265.404 kb on - strand, within MPMX20_04067 at 4265.404 kb on - strand, within MPMX20_04067 at 4265.521 kb on + strand at 4265.529 kb on - strand at 4265.572 kb on + strand at 4265.625 kb on + strand at 4265.661 kb on + strand at 4265.720 kb on + strand at 4265.720 kb on + strand at 4265.762 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,264,629 - -1.9 4,264,706 - +0.9 4,264,713 - -0.8 4,264,912 - MPMX20_04067 0.26 -1.0 4,265,146 - MPMX20_04067 0.53 -0.5 4,265,146 - MPMX20_04067 0.53 -1.1 4,265,146 - MPMX20_04067 0.53 -0.8 4,265,146 - MPMX20_04067 0.53 +0.1 4,265,146 - MPMX20_04067 0.53 -3.4 4,265,146 - MPMX20_04067 0.53 -0.3 4,265,369 + MPMX20_04067 0.78 -2.7 4,265,377 - MPMX20_04067 0.79 +0.1 4,265,377 - MPMX20_04067 0.79 -0.2 4,265,377 - MPMX20_04067 0.79 -1.1 4,265,396 + MPMX20_04067 0.81 -1.6 4,265,404 - MPMX20_04067 0.82 +0.7 4,265,404 - MPMX20_04067 0.82 -1.4 4,265,521 + -1.0 4,265,529 - -0.6 4,265,572 + +1.2 4,265,625 + +0.9 4,265,661 + -1.7 4,265,720 + +10.4 4,265,720 + +0.3 4,265,762 - -0.4
Or see this region's nucleotide sequence