Experiment: M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03337 and MPMX20_03338 are separated by 119 nucleotides MPMX20_03338 and MPMX20_03339 are separated by 109 nucleotides MPMX20_03339 and MPMX20_03340 are separated by 16 nucleotides
MPMX20_03337: MPMX20_03337 - hypothetical protein, at 3,510,882 to 3,511,751
_03337
MPMX20_03338: MPMX20_03338 - Phosphoribosylaminoimidazole-succinocarboxamide synthase, at 3,511,871 to 3,512,584
_03338
MPMX20_03339: MPMX20_03339 - Outer membrane protein assembly factor BamC, at 3,512,694 to 3,513,728
_03339
MPMX20_03340: MPMX20_03340 - 4-hydroxy-tetrahydrodipicolinate synthase, at 3,513,745 to 3,514,623
_03340
Position (kb)
3512
3513
3514 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3511.718 kb on - strand at 3511.736 kb on + strand at 3511.744 kb on - strand at 3511.744 kb on - strand at 3511.754 kb on - strand at 3511.754 kb on - strand at 3511.754 kb on - strand at 3511.755 kb on - strand at 3511.826 kb on + strand at 3511.842 kb on - strand at 3511.887 kb on + strand at 3511.895 kb on - strand at 3511.895 kb on - strand at 3511.922 kb on - strand at 3512.018 kb on - strand, within MPMX20_03338 at 3512.031 kb on + strand, within MPMX20_03338 at 3512.031 kb on + strand, within MPMX20_03338 at 3512.031 kb on + strand, within MPMX20_03338 at 3512.039 kb on - strand, within MPMX20_03338 at 3512.069 kb on + strand, within MPMX20_03338 at 3512.069 kb on + strand, within MPMX20_03338 at 3512.077 kb on - strand, within MPMX20_03338 at 3512.077 kb on - strand, within MPMX20_03338 at 3512.162 kb on + strand, within MPMX20_03338 at 3512.170 kb on - strand, within MPMX20_03338 at 3512.175 kb on + strand, within MPMX20_03338 at 3512.278 kb on + strand, within MPMX20_03338 at 3512.381 kb on + strand, within MPMX20_03338 at 3512.526 kb on - strand at 3512.545 kb on - strand at 3512.564 kb on + strand at 3512.613 kb on + strand at 3512.682 kb on - strand at 3512.755 kb on - strand at 3512.793 kb on - strand at 3512.882 kb on - strand, within MPMX20_03339 at 3512.979 kb on - strand, within MPMX20_03339 at 3513.071 kb on - strand, within MPMX20_03339 at 3513.136 kb on - strand, within MPMX20_03339 at 3513.197 kb on + strand, within MPMX20_03339 at 3513.205 kb on - strand, within MPMX20_03339 at 3513.309 kb on + strand, within MPMX20_03339 at 3513.317 kb on - strand, within MPMX20_03339 at 3513.348 kb on - strand, within MPMX20_03339 at 3513.348 kb on - strand, within MPMX20_03339 at 3513.348 kb on - strand, within MPMX20_03339 at 3513.348 kb on - strand, within MPMX20_03339 at 3513.456 kb on - strand, within MPMX20_03339 at 3513.465 kb on + strand, within MPMX20_03339 at 3513.496 kb on + strand, within MPMX20_03339 at 3513.644 kb on + strand at 3513.659 kb on - strand at 3513.716 kb on - strand at 3513.763 kb on + strand at 3514.634 kb on - strand at 3514.644 kb on - strand at 3514.669 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,511,718 - -0.2 3,511,736 + +1.0 3,511,744 - -1.9 3,511,744 - +1.4 3,511,754 - -1.9 3,511,754 - -1.4 3,511,754 - -3.6 3,511,755 - -1.2 3,511,826 + -2.0 3,511,842 - +0.1 3,511,887 + -0.2 3,511,895 - -0.1 3,511,895 - -1.8 3,511,922 - +0.1 3,512,018 - MPMX20_03338 0.21 -2.4 3,512,031 + MPMX20_03338 0.22 +1.1 3,512,031 + MPMX20_03338 0.22 -0.9 3,512,031 + MPMX20_03338 0.22 -1.5 3,512,039 - MPMX20_03338 0.24 -0.7 3,512,069 + MPMX20_03338 0.28 -1.2 3,512,069 + MPMX20_03338 0.28 -1.8 3,512,077 - MPMX20_03338 0.29 -1.6 3,512,077 - MPMX20_03338 0.29 -1.5 3,512,162 + MPMX20_03338 0.41 -1.6 3,512,170 - MPMX20_03338 0.42 -0.9 3,512,175 + MPMX20_03338 0.43 -2.0 3,512,278 + MPMX20_03338 0.57 -1.6 3,512,381 + MPMX20_03338 0.71 -0.7 3,512,526 - -0.9 3,512,545 - -1.7 3,512,564 + -1.2 3,512,613 + +0.1 3,512,682 - -2.4 3,512,755 - -0.7 3,512,793 - +0.6 3,512,882 - MPMX20_03339 0.18 -1.9 3,512,979 - MPMX20_03339 0.28 -0.6 3,513,071 - MPMX20_03339 0.36 +0.4 3,513,136 - MPMX20_03339 0.43 -0.9 3,513,197 + MPMX20_03339 0.49 +0.5 3,513,205 - MPMX20_03339 0.49 -1.2 3,513,309 + MPMX20_03339 0.59 -0.1 3,513,317 - MPMX20_03339 0.60 -0.7 3,513,348 - MPMX20_03339 0.63 -2.2 3,513,348 - MPMX20_03339 0.63 -2.0 3,513,348 - MPMX20_03339 0.63 +0.5 3,513,348 - MPMX20_03339 0.63 +0.8 3,513,456 - MPMX20_03339 0.74 -1.8 3,513,465 + MPMX20_03339 0.74 -2.1 3,513,496 + MPMX20_03339 0.77 -0.8 3,513,644 + +0.8 3,513,659 - +0.1 3,513,716 - -1.4 3,513,763 + -0.2 3,514,634 - +1.1 3,514,644 - -1.5 3,514,669 - -2.2
Or see this region's nucleotide sequence