Experiment: Laval1257
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00273 and ECD_00274 are separated by 257 nucleotides ECD_00274 and ECD_00275 are separated by 39 nucleotides ECD_00275 and ECD_00276 overlap by 11 nucleotides
ECD_00273: ECD_00273 - putative inner membrane protein, at 304,153 to 304,650
_00273
ECD_00274: ECD_00274 - ankyrin repeat protein, at 304,908 to 305,513
_00274
ECD_00275: ECD_00275 - DUF2877 family protein, at 305,553 to 306,416
_00275
ECD_00276: ECD_00276 - putative NAD(P)-binding succinyl-CoA synthase, at 306,406 to 307,953
_00276
Position (kb) 305
306
307 Strain fitness (log2 ratio) -2
-1
0
1 at 304.690 kb on + strand at 304.691 kb on - strand at 304.691 kb on - strand at 304.704 kb on - strand at 304.705 kb on + strand at 304.935 kb on + strand at 305.006 kb on + strand, within ECD_00274 at 305.170 kb on + strand, within ECD_00274 at 305.270 kb on - strand, within ECD_00274 at 305.433 kb on + strand, within ECD_00274 at 305.511 kb on + strand at 305.511 kb on + strand at 305.778 kb on - strand, within ECD_00275 at 305.778 kb on - strand, within ECD_00275 at 305.803 kb on + strand, within ECD_00275 at 305.803 kb on + strand, within ECD_00275 at 305.804 kb on - strand, within ECD_00275 at 306.326 kb on + strand, within ECD_00275 at 306.326 kb on + strand, within ECD_00275 at 306.405 kb on + strand at 306.419 kb on + strand at 306.420 kb on - strand at 306.439 kb on + strand at 306.484 kb on - strand at 306.672 kb on + strand, within ECD_00276 at 306.984 kb on + strand, within ECD_00276 at 307.167 kb on + strand, within ECD_00276 at 307.168 kb on - strand, within ECD_00276
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1257 remove 304,690 + +1.2 304,691 - +0.9 304,691 - +0.7 304,704 - +0.9 304,705 + -0.6 304,935 + +0.2 305,006 + ECD_00274 0.16 +0.9 305,170 + ECD_00274 0.43 +0.7 305,270 - ECD_00274 0.60 +1.2 305,433 + ECD_00274 0.87 +1.1 305,511 + -0.5 305,511 + +1.2 305,778 - ECD_00275 0.26 -0.2 305,778 - ECD_00275 0.26 +0.9 305,803 + ECD_00275 0.29 -0.2 305,803 + ECD_00275 0.29 -1.1 305,804 - ECD_00275 0.29 -2.6 306,326 + ECD_00275 0.89 -1.8 306,326 + ECD_00275 0.89 -0.0 306,405 + +0.7 306,419 + -0.6 306,420 - +0.9 306,439 + +1.1 306,484 - +0.8 306,672 + ECD_00276 0.17 +0.0 306,984 + ECD_00276 0.37 +1.1 307,167 + ECD_00276 0.49 -2.0 307,168 - ECD_00276 0.49 +0.5
Or see this region's nucleotide sequence