Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c15890 and PGA1_c15910 are separated by 99 nucleotides PGA1_c15910 and PGA1_c15920 overlap by 4 nucleotides PGA1_c15920 and PGA1_c15930 are separated by 6 nucleotides
PGA1_c15890: PGA1_c15890 - extracellular ligand-binding receptor, at 1,649,551 to 1,650,744
_c15890
PGA1_c15910: PGA1_c15910 - putative branched-chain amino acid transport ATP-binding protein, at 1,650,844 to 1,651,632
_c15910
PGA1_c15920: PGA1_c15920 - putative branched-chain amino acid transport ATP-binding protein, at 1,651,629 to 1,652,459
_c15920
PGA1_c15930: PGA1_c15930 - hypothetical protein, at 1,652,466 to 1,652,954
_c15930
Position (kb)
1650
1651
1652 Strain fitness (log2 ratio)
-2
-1
0
1 at 1649.847 kb on + strand, within PGA1_c15890 at 1649.855 kb on - strand, within PGA1_c15890 at 1649.861 kb on + strand, within PGA1_c15890 at 1649.949 kb on + strand, within PGA1_c15890 at 1649.957 kb on - strand, within PGA1_c15890 at 1649.959 kb on - strand, within PGA1_c15890 at 1649.989 kb on - strand, within PGA1_c15890 at 1650.007 kb on + strand, within PGA1_c15890 at 1650.007 kb on + strand, within PGA1_c15890 at 1650.012 kb on + strand, within PGA1_c15890 at 1650.058 kb on - strand, within PGA1_c15890 at 1650.060 kb on + strand, within PGA1_c15890 at 1650.060 kb on + strand, within PGA1_c15890 at 1650.060 kb on + strand, within PGA1_c15890 at 1650.068 kb on - strand, within PGA1_c15890 at 1650.088 kb on + strand, within PGA1_c15890 at 1650.088 kb on + strand, within PGA1_c15890 at 1650.088 kb on + strand, within PGA1_c15890 at 1650.096 kb on - strand, within PGA1_c15890 at 1650.096 kb on - strand, within PGA1_c15890 at 1650.096 kb on - strand, within PGA1_c15890 at 1650.236 kb on + strand, within PGA1_c15890 at 1650.244 kb on - strand, within PGA1_c15890 at 1650.244 kb on - strand, within PGA1_c15890 at 1650.261 kb on + strand, within PGA1_c15890 at 1650.278 kb on + strand, within PGA1_c15890 at 1650.296 kb on + strand, within PGA1_c15890 at 1650.296 kb on + strand, within PGA1_c15890 at 1650.304 kb on - strand, within PGA1_c15890 at 1650.304 kb on - strand, within PGA1_c15890 at 1650.306 kb on + strand, within PGA1_c15890 at 1650.347 kb on + strand, within PGA1_c15890 at 1650.410 kb on + strand, within PGA1_c15890 at 1650.433 kb on + strand, within PGA1_c15890 at 1650.492 kb on - strand, within PGA1_c15890 at 1650.520 kb on + strand, within PGA1_c15890 at 1650.594 kb on + strand, within PGA1_c15890 at 1650.653 kb on + strand at 1650.663 kb on + strand at 1650.666 kb on - strand at 1650.689 kb on + strand at 1650.775 kb on - strand at 1651.007 kb on - strand, within PGA1_c15910 at 1651.012 kb on - strand, within PGA1_c15910 at 1651.040 kb on - strand, within PGA1_c15910 at 1651.072 kb on + strand, within PGA1_c15910 at 1651.072 kb on + strand, within PGA1_c15910 at 1651.224 kb on + strand, within PGA1_c15910 at 1651.232 kb on - strand, within PGA1_c15910 at 1651.275 kb on + strand, within PGA1_c15910 at 1651.318 kb on + strand, within PGA1_c15910 at 1651.326 kb on - strand, within PGA1_c15910 at 1651.368 kb on + strand, within PGA1_c15910 at 1651.386 kb on - strand, within PGA1_c15910 at 1651.386 kb on - strand, within PGA1_c15910 at 1651.449 kb on - strand, within PGA1_c15910 at 1651.450 kb on - strand, within PGA1_c15910 at 1651.496 kb on - strand, within PGA1_c15910 at 1651.549 kb on - strand, within PGA1_c15910 at 1651.688 kb on + strand at 1651.726 kb on - strand, within PGA1_c15920 at 1651.797 kb on + strand, within PGA1_c15920 at 1651.868 kb on - strand, within PGA1_c15920 at 1651.930 kb on - strand, within PGA1_c15920 at 1651.968 kb on + strand, within PGA1_c15920 at 1651.976 kb on - strand, within PGA1_c15920 at 1651.990 kb on - strand, within PGA1_c15920 at 1652.004 kb on + strand, within PGA1_c15920 at 1652.012 kb on - strand, within PGA1_c15920 at 1652.055 kb on - strand, within PGA1_c15920 at 1652.109 kb on - strand, within PGA1_c15920 at 1652.148 kb on + strand, within PGA1_c15920 at 1652.184 kb on + strand, within PGA1_c15920 at 1652.373 kb on - strand, within PGA1_c15920 at 1652.425 kb on + strand at 1652.470 kb on - strand at 1652.521 kb on + strand, within PGA1_c15930 at 1652.521 kb on - strand, within PGA1_c15930 at 1652.529 kb on - strand, within PGA1_c15930
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 1,649,847 + PGA1_c15890 0.25 -1.2 1,649,855 - PGA1_c15890 0.25 +1.1 1,649,861 + PGA1_c15890 0.26 -0.2 1,649,949 + PGA1_c15890 0.33 -0.2 1,649,957 - PGA1_c15890 0.34 -0.8 1,649,959 - PGA1_c15890 0.34 -0.5 1,649,989 - PGA1_c15890 0.37 -0.4 1,650,007 + PGA1_c15890 0.38 -1.8 1,650,007 + PGA1_c15890 0.38 +0.1 1,650,012 + PGA1_c15890 0.39 -0.2 1,650,058 - PGA1_c15890 0.42 -0.7 1,650,060 + PGA1_c15890 0.43 +0.5 1,650,060 + PGA1_c15890 0.43 -0.6 1,650,060 + PGA1_c15890 0.43 +0.1 1,650,068 - PGA1_c15890 0.43 -0.1 1,650,088 + PGA1_c15890 0.45 -1.0 1,650,088 + PGA1_c15890 0.45 -0.2 1,650,088 + PGA1_c15890 0.45 -0.4 1,650,096 - PGA1_c15890 0.46 -0.3 1,650,096 - PGA1_c15890 0.46 -0.2 1,650,096 - PGA1_c15890 0.46 -1.2 1,650,236 + PGA1_c15890 0.57 +0.7 1,650,244 - PGA1_c15890 0.58 +0.8 1,650,244 - PGA1_c15890 0.58 -0.3 1,650,261 + PGA1_c15890 0.59 -0.4 1,650,278 + PGA1_c15890 0.61 +0.4 1,650,296 + PGA1_c15890 0.62 -0.9 1,650,296 + PGA1_c15890 0.62 -0.7 1,650,304 - PGA1_c15890 0.63 +0.2 1,650,304 - PGA1_c15890 0.63 +0.5 1,650,306 + PGA1_c15890 0.63 +0.0 1,650,347 + PGA1_c15890 0.67 -0.7 1,650,410 + PGA1_c15890 0.72 +0.9 1,650,433 + PGA1_c15890 0.74 +0.8 1,650,492 - PGA1_c15890 0.79 +0.5 1,650,520 + PGA1_c15890 0.81 +0.2 1,650,594 + PGA1_c15890 0.87 -2.4 1,650,653 + +0.7 1,650,663 + -1.8 1,650,666 - +0.5 1,650,689 + +0.2 1,650,775 - +1.4 1,651,007 - PGA1_c15910 0.21 -0.6 1,651,012 - PGA1_c15910 0.21 -0.4 1,651,040 - PGA1_c15910 0.25 -0.8 1,651,072 + PGA1_c15910 0.29 +0.9 1,651,072 + PGA1_c15910 0.29 -0.1 1,651,224 + PGA1_c15910 0.48 -0.9 1,651,232 - PGA1_c15910 0.49 +0.7 1,651,275 + PGA1_c15910 0.55 +0.3 1,651,318 + PGA1_c15910 0.60 -0.7 1,651,326 - PGA1_c15910 0.61 -0.3 1,651,368 + PGA1_c15910 0.66 +0.1 1,651,386 - PGA1_c15910 0.69 -0.5 1,651,386 - PGA1_c15910 0.69 -1.3 1,651,449 - PGA1_c15910 0.77 -0.8 1,651,450 - PGA1_c15910 0.77 +0.4 1,651,496 - PGA1_c15910 0.83 -0.7 1,651,549 - PGA1_c15910 0.89 -1.7 1,651,688 + -0.7 1,651,726 - PGA1_c15920 0.12 +0.2 1,651,797 + PGA1_c15920 0.20 +0.2 1,651,868 - PGA1_c15920 0.29 -1.1 1,651,930 - PGA1_c15920 0.36 -0.4 1,651,968 + PGA1_c15920 0.41 -0.5 1,651,976 - PGA1_c15920 0.42 +0.5 1,651,990 - PGA1_c15920 0.43 -0.1 1,652,004 + PGA1_c15920 0.45 -1.5 1,652,012 - PGA1_c15920 0.46 -0.4 1,652,055 - PGA1_c15920 0.51 +0.5 1,652,109 - PGA1_c15920 0.58 +0.4 1,652,148 + PGA1_c15920 0.62 +0.3 1,652,184 + PGA1_c15920 0.67 -0.2 1,652,373 - PGA1_c15920 0.90 +0.6 1,652,425 + -0.0 1,652,470 - -1.0 1,652,521 + PGA1_c15930 0.11 +0.4 1,652,521 - PGA1_c15930 0.11 -0.3 1,652,529 - PGA1_c15930 0.13 -0.7
Or see this region's nucleotide sequence