Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07135

Experiment: LB, pH8

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07130 and BWI76_RS07135 are separated by 31 nucleotidesBWI76_RS07135 and BWI76_RS07140 are separated by 363 nucleotides BWI76_RS07130: BWI76_RS07130 - MFS family transporter, at 1,497,870 to 1,499,105 _RS07130 BWI76_RS07135: BWI76_RS07135 - hypothetical protein, at 1,499,137 to 1,499,850 _RS07135 BWI76_RS07140: BWI76_RS07140 - hypothetical protein, at 1,500,214 to 1,500,534 _RS07140 Position (kb) 1499 1500Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1498.161 kb on + strand, within BWI76_RS07130at 1498.161 kb on + strand, within BWI76_RS07130at 1498.193 kb on + strand, within BWI76_RS07130at 1498.209 kb on + strand, within BWI76_RS07130at 1498.214 kb on + strand, within BWI76_RS07130at 1498.214 kb on + strand, within BWI76_RS07130at 1498.214 kb on + strand, within BWI76_RS07130at 1498.214 kb on + strand, within BWI76_RS07130at 1498.222 kb on - strand, within BWI76_RS07130at 1498.222 kb on - strand, within BWI76_RS07130at 1498.222 kb on - strand, within BWI76_RS07130at 1498.227 kb on + strand, within BWI76_RS07130at 1498.228 kb on + strand, within BWI76_RS07130at 1498.228 kb on - strand, within BWI76_RS07130at 1498.236 kb on - strand, within BWI76_RS07130at 1498.236 kb on - strand, within BWI76_RS07130at 1498.282 kb on + strand, within BWI76_RS07130at 1498.283 kb on + strand, within BWI76_RS07130at 1498.291 kb on - strandat 1498.296 kb on - strand, within BWI76_RS07130at 1498.346 kb on - strand, within BWI76_RS07130at 1498.347 kb on - strand, within BWI76_RS07130at 1498.360 kb on - strand, within BWI76_RS07130at 1498.363 kb on + strand, within BWI76_RS07130at 1498.365 kb on + strand, within BWI76_RS07130at 1498.393 kb on - strand, within BWI76_RS07130at 1498.432 kb on + strand, within BWI76_RS07130at 1498.432 kb on + strand, within BWI76_RS07130at 1498.440 kb on - strand, within BWI76_RS07130at 1498.440 kb on - strand, within BWI76_RS07130at 1498.449 kb on + strand, within BWI76_RS07130at 1498.449 kb on + strand, within BWI76_RS07130at 1498.450 kb on - strand, within BWI76_RS07130at 1498.450 kb on - strandat 1498.451 kb on + strand, within BWI76_RS07130at 1498.457 kb on - strand, within BWI76_RS07130at 1498.459 kb on - strand, within BWI76_RS07130at 1498.459 kb on - strand, within BWI76_RS07130at 1498.459 kb on - strand, within BWI76_RS07130at 1498.463 kb on - strand, within BWI76_RS07130at 1498.464 kb on + strand, within BWI76_RS07130at 1498.464 kb on + strand, within BWI76_RS07130at 1498.465 kb on + strand, within BWI76_RS07130at 1498.473 kb on - strand, within BWI76_RS07130at 1498.473 kb on - strand, within BWI76_RS07130at 1498.473 kb on - strand, within BWI76_RS07130at 1498.473 kb on - strand, within BWI76_RS07130at 1498.473 kb on - strand, within BWI76_RS07130at 1498.473 kb on - strand, within BWI76_RS07130at 1498.475 kb on + strand, within BWI76_RS07130at 1498.475 kb on + strand, within BWI76_RS07130at 1498.475 kb on + strand, within BWI76_RS07130at 1498.475 kb on + strand, within BWI76_RS07130at 1498.475 kb on + strand, within BWI76_RS07130at 1498.483 kb on - strand, within BWI76_RS07130at 1498.483 kb on - strand, within BWI76_RS07130at 1498.483 kb on - strand, within BWI76_RS07130at 1498.498 kb on + strand, within BWI76_RS07130at 1498.562 kb on - strand, within BWI76_RS07130at 1498.607 kb on - strand, within BWI76_RS07130at 1498.615 kb on - strand, within BWI76_RS07130at 1498.696 kb on - strand, within BWI76_RS07130at 1498.696 kb on - strand, within BWI76_RS07130at 1498.749 kb on + strand, within BWI76_RS07130at 1498.756 kb on + strand, within BWI76_RS07130at 1498.771 kb on + strand, within BWI76_RS07130at 1498.771 kb on + strand, within BWI76_RS07130at 1498.778 kb on - strand, within BWI76_RS07130at 1498.832 kb on + strand, within BWI76_RS07130at 1498.850 kb on + strand, within BWI76_RS07130at 1498.850 kb on + strand, within BWI76_RS07130at 1498.850 kb on + strand, within BWI76_RS07130at 1498.912 kb on + strand, within BWI76_RS07130at 1498.920 kb on - strand, within BWI76_RS07130at 1498.968 kb on - strand, within BWI76_RS07130at 1498.993 kb on + strandat 1498.998 kb on + strandat 1499.006 kb on - strandat 1499.142 kb on - strandat 1499.160 kb on + strandat 1499.167 kb on + strandat 1499.209 kb on + strand, within BWI76_RS07135at 1499.209 kb on + strand, within BWI76_RS07135at 1499.215 kb on + strand, within BWI76_RS07135at 1499.228 kb on + strand, within BWI76_RS07135at 1499.236 kb on - strand, within BWI76_RS07135at 1499.236 kb on - strand, within BWI76_RS07135at 1499.293 kb on + strand, within BWI76_RS07135at 1499.293 kb on + strand, within BWI76_RS07135at 1499.293 kb on + strand, within BWI76_RS07135at 1499.300 kb on + strand, within BWI76_RS07135at 1499.301 kb on - strand, within BWI76_RS07135at 1499.305 kb on + strand, within BWI76_RS07135at 1499.305 kb on + strand, within BWI76_RS07135at 1499.308 kb on - strand, within BWI76_RS07135at 1499.308 kb on - strand, within BWI76_RS07135at 1499.313 kb on - strand, within BWI76_RS07135at 1499.318 kb on + strand, within BWI76_RS07135at 1499.318 kb on + strand, within BWI76_RS07135at 1499.318 kb on + strand, within BWI76_RS07135at 1499.318 kb on + strand, within BWI76_RS07135at 1499.326 kb on - strand, within BWI76_RS07135at 1499.326 kb on - strand, within BWI76_RS07135at 1499.326 kb on - strand, within BWI76_RS07135at 1499.332 kb on + strand, within BWI76_RS07135at 1499.332 kb on + strand, within BWI76_RS07135at 1499.361 kb on + strand, within BWI76_RS07135at 1499.361 kb on + strand, within BWI76_RS07135at 1499.361 kb on + strand, within BWI76_RS07135at 1499.361 kb on + strand, within BWI76_RS07135at 1499.369 kb on - strand, within BWI76_RS07135at 1499.371 kb on + strand, within BWI76_RS07135at 1499.371 kb on - strand, within BWI76_RS07135at 1499.389 kb on + strand, within BWI76_RS07135at 1499.389 kb on + strand, within BWI76_RS07135at 1499.397 kb on - strand, within BWI76_RS07135at 1499.420 kb on + strand, within BWI76_RS07135at 1499.428 kb on - strand, within BWI76_RS07135at 1499.455 kb on + strand, within BWI76_RS07135at 1499.551 kb on + strand, within BWI76_RS07135at 1499.647 kb on + strand, within BWI76_RS07135at 1499.786 kb on + strandat 1499.806 kb on - strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.808 kb on + strandat 1499.816 kb on - strandat 1499.818 kb on + strandat 1499.818 kb on + strandat 1499.818 kb on + strandat 1499.818 kb on + strandat 1499.823 kb on + strandat 1499.823 kb on + strandat 1499.831 kb on + strandat 1499.837 kb on + strandat 1499.837 kb on + strandat 1499.888 kb on + strandat 1499.888 kb on + strandat 1499.902 kb on + strandat 1499.906 kb on + strandat 1499.944 kb on - strandat 1499.944 kb on - strandat 1499.944 kb on - strandat 1499.995 kb on - strandat 1500.000 kb on + strandat 1500.000 kb on - strandat 1500.000 kb on - strandat 1500.000 kb on - strandat 1500.000 kb on - strandat 1500.000 kb on - strandat 1500.047 kb on - strandat 1500.047 kb on - strandat 1500.047 kb on - strandat 1500.078 kb on - strandat 1500.078 kb on - strandat 1500.097 kb on - strandat 1500.099 kb on - strandat 1500.099 kb on - strandat 1500.185 kb on - strandat 1500.193 kb on - strandat 1500.281 kb on - strand, within BWI76_RS07140at 1500.291 kb on - strand, within BWI76_RS07140at 1500.466 kb on + strandat 1500.539 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB, pH8
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1,498,161 + BWI76_RS07130 0.24 -0.2
1,498,161 + BWI76_RS07130 0.24 -1.3
1,498,193 + BWI76_RS07130 0.26 +1.1
1,498,209 + BWI76_RS07130 0.27 -1.7
1,498,214 + BWI76_RS07130 0.28 -0.3
1,498,214 + BWI76_RS07130 0.28 -1.7
1,498,214 + BWI76_RS07130 0.28 +0.8
1,498,214 + BWI76_RS07130 0.28 -0.5
1,498,222 - BWI76_RS07130 0.28 -0.3
1,498,222 - BWI76_RS07130 0.28 +0.9
1,498,222 - BWI76_RS07130 0.28 -0.4
1,498,227 + BWI76_RS07130 0.29 +0.4
1,498,228 + BWI76_RS07130 0.29 -0.3
1,498,228 - BWI76_RS07130 0.29 +0.2
1,498,236 - BWI76_RS07130 0.30 -0.8
1,498,236 - BWI76_RS07130 0.30 -0.6
1,498,282 + BWI76_RS07130 0.33 +2.0
1,498,283 + BWI76_RS07130 0.33 +0.9
1,498,291 - -0.0
1,498,296 - BWI76_RS07130 0.34 +0.2
1,498,346 - BWI76_RS07130 0.39 -1.5
1,498,347 - BWI76_RS07130 0.39 -1.2
1,498,360 - BWI76_RS07130 0.40 -1.5
1,498,363 + BWI76_RS07130 0.40 -0.2
1,498,365 + BWI76_RS07130 0.40 -1.0
1,498,393 - BWI76_RS07130 0.42 +1.0
1,498,432 + BWI76_RS07130 0.45 -1.9
1,498,432 + BWI76_RS07130 0.45 +0.1
1,498,440 - BWI76_RS07130 0.46 -2.5
1,498,440 - BWI76_RS07130 0.46 -0.5
1,498,449 + BWI76_RS07130 0.47 -2.5
1,498,449 + BWI76_RS07130 0.47 -0.4
1,498,450 - BWI76_RS07130 0.47 -0.4
1,498,450 - +0.7
1,498,451 + BWI76_RS07130 0.47 -0.8
1,498,457 - BWI76_RS07130 0.47 +0.8
1,498,459 - BWI76_RS07130 0.48 +0.0
1,498,459 - BWI76_RS07130 0.48 +0.1
1,498,459 - BWI76_RS07130 0.48 -0.9
1,498,463 - BWI76_RS07130 0.48 +0.1
1,498,464 + BWI76_RS07130 0.48 -1.6
1,498,464 + BWI76_RS07130 0.48 +0.2
1,498,465 + BWI76_RS07130 0.48 -0.3
1,498,473 - BWI76_RS07130 0.49 -1.2
1,498,473 - BWI76_RS07130 0.49 -0.1
1,498,473 - BWI76_RS07130 0.49 +1.5
1,498,473 - BWI76_RS07130 0.49 +0.3
1,498,473 - BWI76_RS07130 0.49 -0.0
1,498,473 - BWI76_RS07130 0.49 +2.5
1,498,475 + BWI76_RS07130 0.49 -0.0
1,498,475 + BWI76_RS07130 0.49 -0.5
1,498,475 + BWI76_RS07130 0.49 +0.9
1,498,475 + BWI76_RS07130 0.49 -0.3
1,498,475 + BWI76_RS07130 0.49 -1.1
1,498,483 - BWI76_RS07130 0.50 -0.0
1,498,483 - BWI76_RS07130 0.50 -0.5
1,498,483 - BWI76_RS07130 0.50 +0.2
1,498,498 + BWI76_RS07130 0.51 +0.4
1,498,562 - BWI76_RS07130 0.56 -0.3
1,498,607 - BWI76_RS07130 0.60 +1.0
1,498,615 - BWI76_RS07130 0.60 -0.8
1,498,696 - BWI76_RS07130 0.67 +0.1
1,498,696 - BWI76_RS07130 0.67 -0.2
1,498,749 + BWI76_RS07130 0.71 +1.2
1,498,756 + BWI76_RS07130 0.72 -0.5
1,498,771 + BWI76_RS07130 0.73 +0.3
1,498,771 + BWI76_RS07130 0.73 +0.3
1,498,778 - BWI76_RS07130 0.73 +3.0
1,498,832 + BWI76_RS07130 0.78 -0.9
1,498,850 + BWI76_RS07130 0.79 +0.1
1,498,850 + BWI76_RS07130 0.79 +0.0
1,498,850 + BWI76_RS07130 0.79 -0.3
1,498,912 + BWI76_RS07130 0.84 +0.1
1,498,920 - BWI76_RS07130 0.85 -2.5
1,498,968 - BWI76_RS07130 0.89 +1.0
1,498,993 + -1.2
1,498,998 + -2.0
1,499,006 - +0.5
1,499,142 - -0.4
1,499,160 + +2.0
1,499,167 + -1.5
1,499,209 + BWI76_RS07135 0.10 -1.1
1,499,209 + BWI76_RS07135 0.10 -1.5
1,499,215 + BWI76_RS07135 0.11 +0.4
1,499,228 + BWI76_RS07135 0.13 -0.3
1,499,236 - BWI76_RS07135 0.14 -0.0
1,499,236 - BWI76_RS07135 0.14 +0.4
1,499,293 + BWI76_RS07135 0.22 +0.1
1,499,293 + BWI76_RS07135 0.22 -1.0
1,499,293 + BWI76_RS07135 0.22 -0.2
1,499,300 + BWI76_RS07135 0.23 -0.0
1,499,301 - BWI76_RS07135 0.23 -0.8
1,499,305 + BWI76_RS07135 0.24 -1.0
1,499,305 + BWI76_RS07135 0.24 +0.1
1,499,308 - BWI76_RS07135 0.24 -3.0
1,499,308 - BWI76_RS07135 0.24 -1.3
1,499,313 - BWI76_RS07135 0.25 -1.2
1,499,318 + BWI76_RS07135 0.25 -0.3
1,499,318 + BWI76_RS07135 0.25 -1.3
1,499,318 + BWI76_RS07135 0.25 -0.7
1,499,318 + BWI76_RS07135 0.25 +0.6
1,499,326 - BWI76_RS07135 0.26 +0.4
1,499,326 - BWI76_RS07135 0.26 -0.2
1,499,326 - BWI76_RS07135 0.26 -2.6
1,499,332 + BWI76_RS07135 0.27 -1.0
1,499,332 + BWI76_RS07135 0.27 -0.0
1,499,361 + BWI76_RS07135 0.31 -1.9
1,499,361 + BWI76_RS07135 0.31 -0.6
1,499,361 + BWI76_RS07135 0.31 -0.8
1,499,361 + BWI76_RS07135 0.31 -1.0
1,499,369 - BWI76_RS07135 0.32 -0.1
1,499,371 + BWI76_RS07135 0.33 -0.6
1,499,371 - BWI76_RS07135 0.33 -0.3
1,499,389 + BWI76_RS07135 0.35 -0.0
1,499,389 + BWI76_RS07135 0.35 -0.9
1,499,397 - BWI76_RS07135 0.36 -0.6
1,499,420 + BWI76_RS07135 0.40 -0.2
1,499,428 - BWI76_RS07135 0.41 +1.1
1,499,455 + BWI76_RS07135 0.45 -1.3
1,499,551 + BWI76_RS07135 0.58 +0.7
1,499,647 + BWI76_RS07135 0.71 -1.3
1,499,786 + +1.0
1,499,806 - +0.4
1,499,808 + +0.2
1,499,808 + +1.0
1,499,808 + +0.3
1,499,808 + -0.6
1,499,808 + -1.3
1,499,808 + -1.3
1,499,808 + +1.1
1,499,808 + -0.5
1,499,808 + -0.3
1,499,808 + +0.0
1,499,808 + +1.5
1,499,808 + +0.3
1,499,816 - +0.2
1,499,818 + -0.5
1,499,818 + -0.5
1,499,818 + -0.5
1,499,818 + +0.7
1,499,823 + -1.7
1,499,823 + -0.3
1,499,831 + -0.1
1,499,837 + +0.8
1,499,837 + +0.8
1,499,888 + -0.1
1,499,888 + -0.2
1,499,902 + -0.3
1,499,906 + -0.3
1,499,944 - -0.0
1,499,944 - +0.4
1,499,944 - -0.3
1,499,995 - -0.9
1,500,000 + -0.5
1,500,000 - -0.5
1,500,000 - -0.0
1,500,000 - +0.3
1,500,000 - -0.4
1,500,000 - -0.6
1,500,047 - -0.3
1,500,047 - +0.2
1,500,047 - +0.5
1,500,078 - +0.1
1,500,078 - -1.1
1,500,097 - -0.4
1,500,099 - +0.2
1,500,099 - -0.5
1,500,185 - -0.2
1,500,193 - -1.1
1,500,281 - BWI76_RS07140 0.21 -0.3
1,500,291 - BWI76_RS07140 0.24 -0.3
1,500,466 + +1.0
1,500,539 - +1.0

Or see this region's nucleotide sequence