Strain Fitness in Pantoea sp. MT58 around IAI47_16980

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=6hrs; Outgrowth=LBkan50
3,600,991	-				-0.8
3,601,042	+				-2.1
3,601,042	+				-0.4
3,601,042	+				-0.5
3,601,042	+				+0.5
3,601,043	-				+0.3
3,601,043	-				-0.5
3,601,043	-				-0.9
3,601,043	-				+1.2
3,601,043	-				+0.4
3,601,043	-				-1.5
3,601,092	-		IAI47_16975	0.13	-0.2
3,601,157	+		IAI47_16975	0.20	+0.0
3,601,171	+		IAI47_16975	0.21	+0.1
3,601,171	+		IAI47_16975	0.21	-0.5
3,601,214	-		IAI47_16975	0.25	-0.2
3,601,214	-		IAI47_16975	0.25	-0.4
3,601,254	+		IAI47_16975	0.29	+0.1
3,601,254	+		IAI47_16975	0.29	-0.5
3,601,254	+		IAI47_16975	0.29	+0.6
3,601,276	+		IAI47_16975	0.31	-0.9
3,601,277	-		IAI47_16975	0.31	+1.1
3,601,277	-		IAI47_16975	0.31	-1.8
3,601,291	-		IAI47_16975	0.33	+0.1
3,601,291	-		IAI47_16975	0.33	-0.6
3,601,291	-		IAI47_16975	0.33	-0.0
3,601,291	-		IAI47_16975	0.33	+0.4
3,601,291	-		IAI47_16975	0.33	+1.0
3,601,393	+		IAI47_16975	0.43	+0.9
3,601,393	+		IAI47_16975	0.43	+0.0
3,601,393	+		IAI47_16975	0.43	+0.2
3,601,393	+		IAI47_16975	0.43	-1.4
3,601,393	+		IAI47_16975	0.43	+1.4
3,601,394	-		IAI47_16975	0.43	-0.5
3,601,394	-		IAI47_16975	0.43	-0.2
3,601,394	-		IAI47_16975	0.43	-0.2
3,601,490	+		IAI47_16975	0.53	+0.1
3,601,491	-		IAI47_16975	0.53	+1.6
3,601,491	-		IAI47_16975	0.53	-0.6
3,601,491	-		IAI47_16975	0.53	-0.7
3,601,491	-		IAI47_16975	0.53	-1.1
3,601,580	+		IAI47_16975	0.61	-1.9
3,601,580	+		IAI47_16975	0.61	+0.1
3,601,580	+		IAI47_16975	0.61	+0.1
3,601,622	+		IAI47_16975	0.66	-1.0
3,601,622	+		IAI47_16975	0.66	-2.2
3,601,622	+		IAI47_16975	0.66	+0.8
3,601,622	+		IAI47_16975	0.66	-0.5
3,601,623	-		IAI47_16975	0.66	+1.0
3,601,623	-		IAI47_16975	0.66	-0.7
3,601,623	-		IAI47_16975	0.66	-0.7
3,601,623	-		IAI47_16975	0.66	+0.3
3,601,639	+		IAI47_16975	0.67	-0.5
3,601,639	+		IAI47_16975	0.67	-0.3
3,601,639	+		IAI47_16975	0.67	+1.1
3,601,639	+		IAI47_16975	0.67	+1.2
3,601,639	+		IAI47_16975	0.67	-0.8
3,601,640	-		IAI47_16975	0.67	+1.0
3,601,684	+		IAI47_16975	0.72	+0.1
3,601,684	+		IAI47_16975	0.72	+1.4
3,601,684	+		IAI47_16975	0.72	+1.7
3,601,685	-		IAI47_16975	0.72	+0.6
3,601,705	+		IAI47_16975	0.74	-0.2
3,601,705	+		IAI47_16975	0.74	-0.3
3,601,705	+		IAI47_16975	0.74	+0.9
3,601,708	+		IAI47_16975	0.74	-1.5
3,601,709	-		IAI47_16975	0.74	-0.4
3,601,763	-		IAI47_16975	0.80	+1.0
3,601,787	+		IAI47_16975	0.82	-0.8
3,601,787	+		IAI47_16975	0.82	-0.3
3,601,788	-		IAI47_16975	0.82	-0.6
3,601,788	-		IAI47_16975	0.82	+0.2
3,601,788	-		IAI47_16975	0.82	+1.3
3,601,788	-		IAI47_16975	0.82	+2.7
3,601,788	-		IAI47_16975	0.82	+0.1
3,601,788	-		IAI47_16975	0.82	-1.3
3,601,788	-		IAI47_16975	0.82	+0.7
3,601,834	+		IAI47_16975	0.87	-0.0
3,601,834	+		IAI47_16975	0.87	+2.2
3,601,835	-		IAI47_16975	0.87	+0.2
3,601,888	+				+0.1
3,601,888	+				+1.1
3,601,888	+				-0.4
3,601,889	-				-0.4
3,601,889	-				-0.0
3,601,889	-				-1.5
3,601,889	-				-0.8
3,601,889	-				-0.4
3,601,968	-				-2.1
3,601,968	-				-0.2
3,602,055	+				-1.6
3,602,086	-		IAI47_16980	0.13	-2.1
3,602,135	+		IAI47_16980	0.18	-1.0
3,602,135	+		IAI47_16980	0.18	-0.8
3,602,135	+		IAI47_16980	0.18	-2.8
3,602,136	-		IAI47_16980	0.18	+0.4
3,602,136	-		IAI47_16980	0.18	+0.0
3,602,136	-		IAI47_16980	0.18	+0.2
3,602,172	+		IAI47_16980	0.22	+0.8
3,602,172	+		IAI47_16980	0.22	-1.9
3,602,173	-		IAI47_16980	0.22	-0.6
3,602,205	+		IAI47_16980	0.26	+0.5
3,602,227	+		IAI47_16980	0.28	+0.4
3,602,227	+		IAI47_16980	0.28	-0.3
3,602,227	+		IAI47_16980	0.28	-0.3
3,602,227	+		IAI47_16980	0.28	-0.4
3,602,228	-		IAI47_16980	0.28	+0.3
3,602,228	-		IAI47_16980	0.28	+0.7
3,602,228	-		IAI47_16980	0.28	-0.9
3,602,228	-		IAI47_16980	0.28	-0.8
3,602,228	-		IAI47_16980	0.28	-1.6
3,602,228	-		IAI47_16980	0.28	-0.1
3,602,228	-		IAI47_16980	0.28	-0.9
3,602,228	-		IAI47_16980	0.28	-1.2
3,602,228	-		IAI47_16980	0.28	-2.7
3,602,242	+		IAI47_16980	0.30	-0.0
3,602,243	-		IAI47_16980	0.30	-0.3
3,602,422	+		IAI47_16980	0.49	-2.0
3,602,422	+		IAI47_16980	0.49	-2.5
3,602,422	+		IAI47_16980	0.49	+1.0
3,602,422	+		IAI47_16980	0.49	+0.5
3,602,423	-		IAI47_16980	0.49	-0.0
3,602,448	-		IAI47_16980	0.52	-1.3
3,602,587	+		IAI47_16980	0.67	-1.2
3,602,587	+		IAI47_16980	0.67	+0.2
3,602,587	+		IAI47_16980	0.67	-2.2
3,602,588	-		IAI47_16980	0.67	-0.5
3,602,588	-		IAI47_16980	0.67	-1.2
3,602,647	+		IAI47_16980	0.74	-0.9
3,602,683	-		IAI47_16980	0.77	+2.0
3,602,704	+		IAI47_16980	0.80	-1.0
3,602,704	+		IAI47_16980	0.80	-0.5
3,602,705	-		IAI47_16980	0.80	-0.3
3,602,705	-		IAI47_16980	0.80	-2.1
3,602,716	+		IAI47_16980	0.81	+0.2
3,602,717	-		IAI47_16980	0.81	-0.7
3,602,852	+				+0.1
3,602,852	+				+0.3
3,602,852	+				+0.4
3,602,852	+				+0.8
3,602,853	-				-0.7
3,602,853	-				-0.0
3,602,853	-				+1.5
3,602,853	-				-2.2
3,602,875	+				-0.6
3,602,875	+				-0.1
3,602,875	+				-0.9
3,602,875	+				-0.6
3,602,875	+				-1.4
3,602,875	+				-1.1
3,602,876	-				+0.1
3,602,876	-				-0.4
3,602,876	-				+0.5
3,602,876	-				+0.1
3,602,876	-				+3.2
3,602,876	-				+0.1
3,602,876	-				+0.8
3,602,876	-				+1.1
3,602,876	-				-1.0
3,602,923	+				+1.3
3,602,923	+				+1.4
3,602,923	+				+0.2
3,602,923	+				-1.0
3,602,923	+				+1.4
3,602,923	+				+0.3
3,602,923	+				-0.3
3,602,923	+				-1.5
3,602,924	-				+0.8
3,602,924	-				+1.2
3,602,924	-				-0.5
3,602,926	+				-0.9
3,602,926	+				+1.1
3,602,926	+				+0.6
3,602,926	+				+0.4
3,602,927	-				-0.1
3,602,945	+				-0.9
3,602,945	+				-0.2
3,602,946	-				-1.8
3,602,946	-				-0.8
3,602,946	-				+0.4
3,602,946	-				-0.7
3,602,946	-				+0.1
3,603,028	+				+0.1
3,603,028	+				-0.0
3,603,028	+				-0.7
3,603,029	-				-0.2
3,603,029	-				+0.0
3,603,048	+				-0.7
3,603,065	+				-1.1
3,603,065	+				-0.3
3,603,065	+				+0.6
3,603,065	+				-0.8
3,603,066	-				+0.5
3,603,066	-				-0.4
3,603,066	-				-0.9
3,603,066	-				-0.2
3,603,119	+				-0.3
3,603,119	+				-0.4
3,603,119	+				+0.2
3,603,119	+				+0.8
3,603,119	+				+0.1
3,603,119	+				-0.2
3,603,119	+				-1.0
3,603,119	+				+0.6
3,603,119	+				-0.6
3,603,120	-				-0.7
3,603,120	-				+0.5
3,603,120	-				-0.9
3,603,120	-				-1.4
3,603,120	-				-1.5
3,603,120	-				+0.4
3,603,120	-				-1.0
3,603,120	-				+2.5
3,603,120	-				+1.2
3,603,120	-				-0.3
3,603,135	+				-0.3
3,603,175	+		IAI47_16985	0.14	-1.7
3,603,175	+		IAI47_16985	0.14	-0.7
3,603,176	-		IAI47_16985	0.15	+0.5
3,603,207	-		IAI47_16985	0.19	-1.6
3,603,207	-		IAI47_16985	0.19	-0.1
3,603,207	-		IAI47_16985	0.19	-2.0
3,603,217	-		IAI47_16985	0.20	-0.6
3,603,217	-		IAI47_16985	0.20	-0.8
3,603,258	+		IAI47_16985	0.26	-0.3
3,603,258	+		IAI47_16985	0.26	+0.4
3,603,258	+		IAI47_16985	0.26	-2.5
3,603,258	+		IAI47_16985	0.26	-0.3
3,603,258	+		IAI47_16985	0.26	+1.1
3,603,258	+		IAI47_16985	0.26	+0.2
3,603,258	+		IAI47_16985	0.26	-0.1
3,603,258	+		IAI47_16985	0.26	+0.7
3,603,258	+		IAI47_16985	0.26	+1.5
3,603,259	-		IAI47_16985	0.26	-1.4
3,603,259	-		IAI47_16985	0.26	+3.6
3,603,259	-		IAI47_16985	0.26	+0.6
3,603,259	-		IAI47_16985	0.26	-1.1
3,603,259	-		IAI47_16985	0.26	-1.5
3,603,259	-		IAI47_16985	0.26	-1.9
3,603,259	-		IAI47_16985	0.26	-0.2
3,603,259	-		IAI47_16985	0.26	-0.5
3,603,259	-		IAI47_16985	0.26	+0.0
3,603,259	-		IAI47_16985	0.26	-1.6
3,603,259	-		IAI47_16985	0.26	-1.2
3,603,403	-		IAI47_16985	0.45	+0.7
3,603,403	-		IAI47_16985	0.45	-0.5
3,603,403	-		IAI47_16985	0.45	+0.9
3,603,403	-		IAI47_16985	0.45	+1.3
3,603,408	+		IAI47_16985	0.46	-0.1
3,603,477	+		IAI47_16985	0.55	-0.2
3,603,477	+		IAI47_16985	0.55	+1.0
3,603,477	+		IAI47_16985	0.55	-0.8
3,603,478	-		IAI47_16985	0.55	+0.2
3,603,478	-		IAI47_16985	0.55	-1.1
3,603,478	-		IAI47_16985	0.55	+0.7
3,603,478	-		IAI47_16985	0.55	-0.3
3,603,478	-		IAI47_16985	0.55	+1.5
3,603,478	-		IAI47_16985	0.55	-1.9
3,603,480	+		IAI47_16985	0.55	-1.1
3,603,481	-		IAI47_16985	0.55	-1.3
3,603,501	+		IAI47_16985	0.58	-0.2
3,603,524	+		IAI47_16985	0.61	+0.4
3,603,524	+		IAI47_16985	0.61	+0.6
3,603,525	-		IAI47_16985	0.61	+0.7
3,603,525	-		IAI47_16985	0.61	-0.4
3,603,525	-		IAI47_16985	0.61	-1.4
3,603,599	+		IAI47_16985	0.71	-0.4
3,603,599	+		IAI47_16985	0.71	-1.1
3,603,599	+		IAI47_16985	0.71	+1.7
3,603,599	+		IAI47_16985	0.71	-0.5
3,603,599	+		IAI47_16985	0.71	-0.6
3,603,599	+		IAI47_16985	0.71	-0.7
3,603,599	+		IAI47_16985	0.71	+0.1
3,603,600	-		IAI47_16985	0.71	-2.3
3,603,600	-		IAI47_16985	0.71	-0.2
3,603,600	-		IAI47_16985	0.71	+0.6
3,603,600	-		IAI47_16985	0.71	+1.7
3,603,600	-		IAI47_16985	0.71	-0.8
3,603,600	-		IAI47_16985	0.71	-0.9
3,603,644	+		IAI47_16985	0.77	-0.3
3,603,772	+				+0.3
3,603,773	-				+0.5
3,603,773	-				-0.1
3,603,799	-				-0.4
3,603,852	-				-1.5
3,603,852	-				+0.9
3,603,852	-				-0.1
3,603,855	-				-0.4
3,603,862	+				-0.7