Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.3147.1

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
3,066,169	+		Xcc-8004.3147.1	0.81	-0.2
3,066,169	+		Xcc-8004.3147.1	0.81	+0.0
3,066,169	+		Xcc-8004.3147.1	0.81	-0.7
3,066,169	+		Xcc-8004.3147.1	0.81	+2.1
3,066,169	+		Xcc-8004.3147.1	0.81	+0.8
3,066,169	+		Xcc-8004.3147.1	0.81	-0.5
3,066,170	-		Xcc-8004.3147.1	0.81	-0.4
3,066,170	-		Xcc-8004.3147.1	0.81	-0.7
3,066,170	-		Xcc-8004.3147.1	0.81	-0.6
3,066,170	-		Xcc-8004.3147.1	0.81	+0.3
3,066,170	-		Xcc-8004.3147.1	0.81	+0.3
3,066,170	-		Xcc-8004.3147.1	0.81	-0.1
3,066,170	-		Xcc-8004.3147.1	0.81	+0.4
3,066,170	-		Xcc-8004.3147.1	0.81	-0.6
3,066,170	-		Xcc-8004.3147.1	0.81	-0.1
3,066,170	-		Xcc-8004.3147.1	0.81	-0.9
3,066,170	-		Xcc-8004.3147.1	0.81	-0.9
3,066,170	-		Xcc-8004.3147.1	0.81	-0.9
3,066,170	-		Xcc-8004.3147.1	0.81	-1.2
3,066,170	-		Xcc-8004.3147.1	0.81	+0.3
3,066,170	-		Xcc-8004.3147.1	0.81	+0.1
3,066,207	+				-0.7
3,066,207	+				-0.1
3,066,207	+				-0.7
3,066,207	+				-1.7
3,066,207	+				-0.4
3,066,207	+				-0.1
3,066,207	+				+0.3
3,066,207	+				-0.0
3,066,208	-				-0.8
3,066,208	-				-0.2
3,066,208	-				-0.2
3,066,208	-				+0.1
3,066,208	-				-0.2