Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.3536.1

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
3,425,424	+		Xcc-8004.3535.1	0.68	+0.3
3,425,577	+		Xcc-8004.3535.1	0.76	-0.6
3,425,577	+		Xcc-8004.3535.1	0.76	-0.6
3,425,727	+		Xcc-8004.3535.1	0.83	-0.7
3,425,728	-		Xcc-8004.3535.1	0.83	+0.2
3,425,728	-		Xcc-8004.3535.1	0.83	+0.0
3,425,728	-		Xcc-8004.3535.1	0.83	+1.1
3,425,733	+		Xcc-8004.3535.1	0.83	+0.3
3,425,733	+		Xcc-8004.3535.1	0.83	-0.7
3,425,733	+		Xcc-8004.3535.1	0.83	-0.1
3,425,734	-		Xcc-8004.3535.1	0.83	+0.4
3,425,838	+		Xcc-8004.3535.1	0.88	+0.6
3,426,012	+				-1.0
3,426,012	+				-0.8
3,426,073	-				-0.4
3,426,349	-				-0.4
3,426,368	+				+0.8
3,426,369	-				+1.2
3,426,612	+		Xcc-8004.3536.1	0.25	-1.8
3,426,613	-		Xcc-8004.3536.1	0.25	+0.1
3,426,613	-		Xcc-8004.3536.1	0.25	-2.5
3,426,665	+		Xcc-8004.3536.1	0.29	-1.4
3,426,767	-		Xcc-8004.3536.1	0.38	-1.3
3,426,869	-		Xcc-8004.3536.1	0.47	-1.0
3,427,066	-		Xcc-8004.3536.1	0.64	-2.2
3,427,066	-		Xcc-8004.3536.1	0.64	-3.2
3,427,069	+		Xcc-8004.3536.1	0.64	-1.3
3,427,070	-		Xcc-8004.3536.1	0.64	-1.5
3,427,070	-		Xcc-8004.3536.1	0.64	+0.3
3,427,070	-		Xcc-8004.3536.1	0.64	-2.1
3,427,168	+		Xcc-8004.3536.1	0.73	-1.7
3,427,169	-		Xcc-8004.3536.1	0.73	-0.3
3,427,169	-		Xcc-8004.3536.1	0.73	-2.5
3,427,169	-		Xcc-8004.3536.1	0.73	-2.6
3,427,345	-		Xcc-8004.3536.1	0.88	-0.8
3,427,349	-		Xcc-8004.3536.1	0.88	-1.0
3,427,465	+				-2.0
3,427,551	-				+0.3
3,427,552	+				-1.3
3,427,556	+				-0.6
3,427,557	-				-1.2
3,427,586	+				+0.6
3,427,586	+				-0.2
3,427,604	+				-0.5
3,427,604	+				-2.7
3,427,672	+				+1.7
3,427,672	+				-0.1
3,427,672	+				-0.1
3,427,673	-				-0.6
3,427,673	-				-1.5
3,427,867	+		Xcc-8004.3537.1	0.11	-2.1
3,427,874	-		Xcc-8004.3537.1	0.11	+0.7
3,428,224	+		Xcc-8004.3537.1	0.32	-0.4
3,428,224	+		Xcc-8004.3537.1	0.32	-1.6
3,428,224	+		Xcc-8004.3537.1	0.32	-0.9
3,428,225	-		Xcc-8004.3537.1	0.32	-0.2
3,428,225	-		Xcc-8004.3537.1	0.32	-0.6
3,428,296	+		Xcc-8004.3537.1	0.36	+0.5
3,428,296	+		Xcc-8004.3537.1	0.36	+1.6
3,428,302	+		Xcc-8004.3537.1	0.36	+0.3