Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1863 and ihfB are separated by 74 nucleotides ihfB and DVU1865 overlap by 14 nucleotides DVU1865 and DVU1866 are separated by 51 nucleotides DVU1866 and dapF are separated by 25 nucleotides dapF and dapA are separated by 55 nucleotides
DVU1863: DVU1863 - flagellar synthesis regulator FleN, putative (TIGR), at 1,930,440 to 1,931,258
DVU1863
DVU1864: ihfB - DNA-binding protein HU, beta subunit, putative (TIGR), at 1,931,333 to 1,931,614
ihfB
DVU1865: DVU1865 - hypothetical protein (TIGR), at 1,931,601 to 1,931,741
DVU1865
DVU1866: DVU1866 - hypothetical protein (TIGR), at 1,931,793 to 1,932,494
DVU1866
DVU1867: dapF - diaminopimelate epimerase (TIGR), at 1,932,520 to 1,933,368
dapF
DVU1868: dapA - dihydrodipicolinate synthase (TIGR), at 1,933,424 to 1,934,302
dapA
Position (kb)
1931
1932
1933 Strain fitness (log2 ratio)
-2
-1
0
1 at 1930.909 kb on + strand, within DVU1863 at 1930.927 kb on - strand, within DVU1863 at 1931.078 kb on + strand, within DVU1863 at 1931.090 kb on + strand, within DVU1863 at 1931.204 kb on - strand at 1931.252 kb on + strand at 1931.329 kb on - strand at 1931.350 kb on + strand at 1931.608 kb on + strand at 1931.729 kb on - strand at 1931.773 kb on + strand at 1931.864 kb on + strand, within DVU1866 at 1932.025 kb on + strand, within DVU1866 at 1932.151 kb on - strand, within DVU1866 at 1932.161 kb on - strand, within DVU1866 at 1932.174 kb on + strand, within DVU1866 at 1932.246 kb on + strand, within DVU1866 at 1932.374 kb on - strand, within DVU1866 at 1932.466 kb on + strand at 1932.511 kb on - strand at 1933.332 kb on + strand at 1933.360 kb on - strand at 1933.362 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 1,930,909 + DVU1863 0.57 -0.2 1,930,927 - DVU1863 0.59 -0.0 1,931,078 + DVU1863 0.78 -0.3 1,931,090 + DVU1863 0.79 -0.2 1,931,204 - -1.7 1,931,252 + -0.2 1,931,329 - +0.1 1,931,350 + +1.7 1,931,608 + -1.9 1,931,729 - -0.2 1,931,773 + -0.3 1,931,864 + DVU1866 0.10 -0.2 1,932,025 + DVU1866 0.33 +0.1 1,932,151 - DVU1866 0.51 -0.3 1,932,161 - DVU1866 0.52 -0.0 1,932,174 + DVU1866 0.54 +0.7 1,932,246 + DVU1866 0.65 +0.1 1,932,374 - DVU1866 0.83 +0.2 1,932,466 + -0.4 1,932,511 - -1.6 1,933,332 + -0.2 1,933,360 - -0.3 1,933,362 + -0.4
Or see this region's nucleotide sequence