Experiment: Sisomicin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00770 and BWI76_RS00775 are separated by 241 nucleotides BWI76_RS00775 and BWI76_RS00780 are separated by 94 nucleotides BWI76_RS00780 and BWI76_RS00785 are separated by 266 nucleotides
BWI76_RS00770: BWI76_RS00770 - primosomal protein N', at 156,482 to 158,677
_RS00770
BWI76_RS00775: BWI76_RS00775 - 50S ribosomal protein L31, at 158,919 to 159,134
_RS00775
BWI76_RS00780: BWI76_RS00780 - met repressor, at 159,229 to 159,546
_RS00780
BWI76_RS00785: BWI76_RS00785 - cystathionine gamma-synthase, at 159,813 to 160,973
_RS00785
Position (kb) 159
160 Strain fitness (log2 ratio) -1
0
1 at 159.493 kb on + strand, within BWI76_RS00780 at 159.623 kb on - strand at 159.654 kb on + strand at 159.654 kb on + strand at 159.803 kb on - strand at 159.889 kb on + strand at 160.023 kb on + strand, within BWI76_RS00785 at 160.223 kb on + strand, within BWI76_RS00785 at 160.262 kb on + strand, within BWI76_RS00785 at 160.277 kb on - strand, within BWI76_RS00785 at 160.337 kb on - strand, within BWI76_RS00785 at 160.423 kb on + strand at 160.526 kb on - strand, within BWI76_RS00785 at 160.546 kb on + strand, within BWI76_RS00785
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.008 mg/ml remove 159,493 + BWI76_RS00780 0.83 -0.9 159,623 - +0.1 159,654 + +1.0 159,654 + +0.3 159,803 - +0.6 159,889 + -0.8 160,023 + BWI76_RS00785 0.18 -0.5 160,223 + BWI76_RS00785 0.35 +0.5 160,262 + BWI76_RS00785 0.39 -0.3 160,277 - BWI76_RS00785 0.40 -0.7 160,337 - BWI76_RS00785 0.45 -0.4 160,423 + +1.0 160,526 - BWI76_RS00785 0.61 +0.1 160,546 + BWI76_RS00785 0.63 +1.5
Or see this region's nucleotide sequence