Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11875 and BWI76_RS11880 are separated by 228 nucleotides BWI76_RS11880 and BWI76_RS11885 are separated by 165 nucleotides
BWI76_RS11875: BWI76_RS11875 - hypothetical protein, at 2,497,379 to 2,499,277
_RS11875
BWI76_RS11880: BWI76_RS11880 - 23S rRNA pseudouridylate synthase B, at 2,499,506 to 2,500,393
_RS11880
BWI76_RS11885: BWI76_RS11885 - MFS transporter, at 2,500,559 to 2,501,923
_RS11885
Position (kb)
2499
2500
2501 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2498.530 kb on - strand, within BWI76_RS11875 at 2498.542 kb on + strand, within BWI76_RS11875 at 2498.550 kb on - strand, within BWI76_RS11875 at 2498.989 kb on + strand, within BWI76_RS11875 at 2499.085 kb on - strand, within BWI76_RS11875 at 2499.266 kb on + strand at 2499.491 kb on + strand at 2499.491 kb on + strand at 2499.491 kb on + strand at 2499.499 kb on - strand at 2499.499 kb on - strand at 2500.084 kb on + strand, within BWI76_RS11880 at 2500.130 kb on + strand, within BWI76_RS11880 at 2500.242 kb on - strand, within BWI76_RS11880 at 2500.242 kb on - strand, within BWI76_RS11880 at 2500.242 kb on - strand, within BWI76_RS11880 at 2500.242 kb on - strand, within BWI76_RS11880 at 2500.242 kb on - strand, within BWI76_RS11880 at 2500.257 kb on + strand, within BWI76_RS11880 at 2500.257 kb on + strand, within BWI76_RS11880 at 2500.265 kb on - strand, within BWI76_RS11880 at 2500.319 kb on + strand at 2500.327 kb on - strand at 2500.381 kb on - strand at 2500.458 kb on - strand at 2500.458 kb on - strand at 2500.458 kb on - strand at 2500.516 kb on + strand at 2500.516 kb on + strand at 2500.516 kb on + strand at 2500.516 kb on + strand at 2500.516 kb on + strand at 2500.516 kb on + strand at 2500.516 kb on + strand at 2500.516 kb on + strand at 2500.516 kb on + strand at 2500.516 kb on + strand at 2500.516 kb on + strand at 2500.521 kb on + strand at 2500.524 kb on - strand at 2500.524 kb on - strand at 2500.524 kb on - strand at 2500.524 kb on - strand at 2500.524 kb on - strand at 2500.524 kb on - strand at 2500.524 kb on - strand at 2500.524 kb on - strand at 2500.524 kb on - strand at 2500.524 kb on - strand at 2500.529 kb on - strand at 2500.540 kb on + strand at 2500.548 kb on - strand at 2500.595 kb on - strand at 2500.713 kb on + strand, within BWI76_RS11885 at 2500.723 kb on - strand, within BWI76_RS11885 at 2500.732 kb on - strand, within BWI76_RS11885 at 2500.804 kb on - strand, within BWI76_RS11885 at 2500.805 kb on - strand, within BWI76_RS11885 at 2500.816 kb on + strand, within BWI76_RS11885 at 2500.839 kb on + strand, within BWI76_RS11885 at 2500.839 kb on + strand, within BWI76_RS11885 at 2500.839 kb on + strand, within BWI76_RS11885 at 2500.839 kb on + strand, within BWI76_RS11885 at 2500.839 kb on + strand, within BWI76_RS11885 at 2500.865 kb on + strand, within BWI76_RS11885 at 2500.865 kb on - strand, within BWI76_RS11885 at 2500.867 kb on + strand, within BWI76_RS11885 at 2500.867 kb on + strand, within BWI76_RS11885 at 2500.872 kb on + strand, within BWI76_RS11885 at 2500.873 kb on - strand, within BWI76_RS11885 at 2500.880 kb on - strand at 2500.880 kb on - strand, within BWI76_RS11885 at 2500.915 kb on + strand, within BWI76_RS11885 at 2500.954 kb on + strand, within BWI76_RS11885 at 2500.970 kb on + strand, within BWI76_RS11885 at 2500.975 kb on + strand at 2500.981 kb on + strand, within BWI76_RS11885 at 2500.981 kb on + strand, within BWI76_RS11885 at 2500.983 kb on + strand, within BWI76_RS11885 at 2500.983 kb on + strand, within BWI76_RS11885 at 2500.983 kb on + strand, within BWI76_RS11885 at 2500.983 kb on + strand, within BWI76_RS11885 at 2500.991 kb on - strand, within BWI76_RS11885 at 2500.991 kb on - strand, within BWI76_RS11885 at 2500.991 kb on - strand, within BWI76_RS11885 at 2500.993 kb on + strand, within BWI76_RS11885 at 2500.993 kb on + strand, within BWI76_RS11885 at 2500.993 kb on + strand, within BWI76_RS11885 at 2500.993 kb on + strand, within BWI76_RS11885 at 2501.028 kb on + strand, within BWI76_RS11885 at 2501.052 kb on + strand, within BWI76_RS11885 at 2501.097 kb on + strand, within BWI76_RS11885 at 2501.100 kb on + strand, within BWI76_RS11885 at 2501.117 kb on + strand, within BWI76_RS11885 at 2501.118 kb on - strand, within BWI76_RS11885 at 2501.128 kb on + strand, within BWI76_RS11885 at 2501.133 kb on + strand, within BWI76_RS11885 at 2501.133 kb on + strand, within BWI76_RS11885 at 2501.133 kb on + strand, within BWI76_RS11885 at 2501.169 kb on + strand, within BWI76_RS11885 at 2501.269 kb on + strand, within BWI76_RS11885 at 2501.306 kb on + strand, within BWI76_RS11885 at 2501.306 kb on + strand, within BWI76_RS11885 at 2501.307 kb on + strand, within BWI76_RS11885 at 2501.313 kb on - strand, within BWI76_RS11885 at 2501.366 kb on + strand, within BWI76_RS11885 at 2501.366 kb on + strand, within BWI76_RS11885 at 2501.366 kb on + strand, within BWI76_RS11885 at 2501.366 kb on + strand, within BWI76_RS11885 at 2501.374 kb on - strand, within BWI76_RS11885 at 2501.374 kb on - strand, within BWI76_RS11885 at 2501.374 kb on - strand, within BWI76_RS11885
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,498,530 - BWI76_RS11875 0.61 +1.0 2,498,542 + BWI76_RS11875 0.61 +0.1 2,498,550 - BWI76_RS11875 0.62 +0.6 2,498,989 + BWI76_RS11875 0.85 +0.3 2,499,085 - BWI76_RS11875 0.90 -0.3 2,499,266 + +0.4 2,499,491 + +0.2 2,499,491 + -0.1 2,499,491 + -0.2 2,499,499 - -0.1 2,499,499 - -0.4 2,500,084 + BWI76_RS11880 0.65 -0.7 2,500,130 + BWI76_RS11880 0.70 +0.0 2,500,242 - BWI76_RS11880 0.83 +0.3 2,500,242 - BWI76_RS11880 0.83 -1.0 2,500,242 - BWI76_RS11880 0.83 +0.3 2,500,242 - BWI76_RS11880 0.83 -1.1 2,500,242 - BWI76_RS11880 0.83 +0.9 2,500,257 + BWI76_RS11880 0.85 -0.6 2,500,257 + BWI76_RS11880 0.85 -0.6 2,500,265 - BWI76_RS11880 0.85 -2.8 2,500,319 + -0.3 2,500,327 - +0.2 2,500,381 - +0.6 2,500,458 - -0.3 2,500,458 - -0.7 2,500,458 - +0.5 2,500,516 + +0.1 2,500,516 + -0.2 2,500,516 + +0.7 2,500,516 + -0.4 2,500,516 + -0.3 2,500,516 + +0.4 2,500,516 + +0.2 2,500,516 + +0.9 2,500,516 + +0.9 2,500,516 + +1.0 2,500,516 + -0.1 2,500,521 + -1.6 2,500,524 - -1.6 2,500,524 - -0.3 2,500,524 - +0.7 2,500,524 - -0.4 2,500,524 - +0.1 2,500,524 - -0.5 2,500,524 - -1.7 2,500,524 - -0.2 2,500,524 - -0.5 2,500,524 - +0.3 2,500,529 - +1.2 2,500,540 + -0.7 2,500,548 - +0.1 2,500,595 - -0.9 2,500,713 + BWI76_RS11885 0.11 -1.2 2,500,723 - BWI76_RS11885 0.12 -0.2 2,500,732 - BWI76_RS11885 0.13 -0.2 2,500,804 - BWI76_RS11885 0.18 +0.3 2,500,805 - BWI76_RS11885 0.18 +0.7 2,500,816 + BWI76_RS11885 0.19 -0.2 2,500,839 + BWI76_RS11885 0.21 +0.9 2,500,839 + BWI76_RS11885 0.21 -0.6 2,500,839 + BWI76_RS11885 0.21 -1.3 2,500,839 + BWI76_RS11885 0.21 -1.7 2,500,839 + BWI76_RS11885 0.21 -0.8 2,500,865 + BWI76_RS11885 0.22 +1.9 2,500,865 - BWI76_RS11885 0.22 +0.0 2,500,867 + BWI76_RS11885 0.23 -0.7 2,500,867 + BWI76_RS11885 0.23 -1.2 2,500,872 + BWI76_RS11885 0.23 +0.8 2,500,873 - BWI76_RS11885 0.23 -0.7 2,500,880 - +1.0 2,500,880 - BWI76_RS11885 0.24 -2.1 2,500,915 + BWI76_RS11885 0.26 -1.4 2,500,954 + BWI76_RS11885 0.29 -0.3 2,500,970 + BWI76_RS11885 0.30 -0.3 2,500,975 + +1.6 2,500,981 + BWI76_RS11885 0.31 -0.2 2,500,981 + BWI76_RS11885 0.31 +0.3 2,500,983 + BWI76_RS11885 0.31 -0.3 2,500,983 + BWI76_RS11885 0.31 -1.9 2,500,983 + BWI76_RS11885 0.31 +0.0 2,500,983 + BWI76_RS11885 0.31 +0.0 2,500,991 - BWI76_RS11885 0.32 +1.6 2,500,991 - BWI76_RS11885 0.32 +1.6 2,500,991 - BWI76_RS11885 0.32 -0.4 2,500,993 + BWI76_RS11885 0.32 -1.4 2,500,993 + BWI76_RS11885 0.32 -0.2 2,500,993 + BWI76_RS11885 0.32 -1.7 2,500,993 + BWI76_RS11885 0.32 -0.9 2,501,028 + BWI76_RS11885 0.34 -2.9 2,501,052 + BWI76_RS11885 0.36 -1.6 2,501,097 + BWI76_RS11885 0.39 -0.8 2,501,100 + BWI76_RS11885 0.40 -0.7 2,501,117 + BWI76_RS11885 0.41 +0.2 2,501,118 - BWI76_RS11885 0.41 +0.1 2,501,128 + BWI76_RS11885 0.42 +0.6 2,501,133 + BWI76_RS11885 0.42 -0.4 2,501,133 + BWI76_RS11885 0.42 -0.9 2,501,133 + BWI76_RS11885 0.42 -2.0 2,501,169 + BWI76_RS11885 0.45 +1.0 2,501,269 + BWI76_RS11885 0.52 -0.7 2,501,306 + BWI76_RS11885 0.55 -0.1 2,501,306 + BWI76_RS11885 0.55 -0.1 2,501,307 + BWI76_RS11885 0.55 -0.4 2,501,313 - BWI76_RS11885 0.55 +0.4 2,501,366 + BWI76_RS11885 0.59 +0.8 2,501,366 + BWI76_RS11885 0.59 -0.0 2,501,366 + BWI76_RS11885 0.59 +0.1 2,501,366 + BWI76_RS11885 0.59 +0.8 2,501,374 - BWI76_RS11885 0.60 -1.6 2,501,374 - BWI76_RS11885 0.60 +1.2 2,501,374 - BWI76_RS11885 0.60 -0.4
Or see this region's nucleotide sequence