Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22260

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22250 and BWI76_RS22255 overlap by 1 nucleotidesBWI76_RS22255 and BWI76_RS22260 are separated by 95 nucleotidesBWI76_RS22260 and BWI76_RS22265 overlap by 4 nucleotides BWI76_RS22250: BWI76_RS22250 - nitric oxide reductase transcription regulator, at 4,637,090 to 4,638,634 _RS22250 BWI76_RS22255: BWI76_RS22255 - transcriptional regulator, at 4,638,634 to 4,638,726 _RS22255 BWI76_RS22260: BWI76_RS22260 - anaerobic nitric oxide reductase flavorubredoxin, at 4,638,822 to 4,640,267 _RS22260 BWI76_RS22265: BWI76_RS22265 - NADH:flavorubredoxin oxidoreductase, at 4,640,264 to 4,641,397 _RS22265 Position (kb) 4638 4639 4640 4641Strain fitness (log2 ratio) -2 -1 0 1at 4637.886 kb on + strand, within BWI76_RS22250at 4638.004 kb on + strand, within BWI76_RS22250at 4638.077 kb on + strand, within BWI76_RS22250at 4638.102 kb on + strand, within BWI76_RS22250at 4638.119 kb on - strand, within BWI76_RS22250at 4638.169 kb on - strand, within BWI76_RS22250at 4638.216 kb on - strand, within BWI76_RS22250at 4638.235 kb on - strand, within BWI76_RS22250at 4638.260 kb on + strand, within BWI76_RS22250at 4638.458 kb on - strand, within BWI76_RS22250at 4638.543 kb on + strandat 4638.858 kb on + strandat 4638.876 kb on - strandat 4638.900 kb on - strandat 4639.181 kb on - strand, within BWI76_RS22260at 4639.302 kb on + strand, within BWI76_RS22260at 4639.339 kb on - strand, within BWI76_RS22260at 4639.339 kb on - strand, within BWI76_RS22260at 4639.405 kb on - strand, within BWI76_RS22260at 4639.667 kb on - strand, within BWI76_RS22260at 4639.897 kb on - strand, within BWI76_RS22260at 4639.955 kb on + strand, within BWI76_RS22260at 4640.399 kb on - strand, within BWI76_RS22265at 4640.663 kb on + strand, within BWI76_RS22265at 4640.894 kb on - strand, within BWI76_RS22265

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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4,637,886 + BWI76_RS22250 0.52 -0.1
4,638,004 + BWI76_RS22250 0.59 -1.0
4,638,077 + BWI76_RS22250 0.64 -1.9
4,638,102 + BWI76_RS22250 0.66 -2.0
4,638,119 - BWI76_RS22250 0.67 +0.6
4,638,169 - BWI76_RS22250 0.70 -0.6
4,638,216 - BWI76_RS22250 0.73 -2.2
4,638,235 - BWI76_RS22250 0.74 -0.8
4,638,260 + BWI76_RS22250 0.76 -0.8
4,638,458 - BWI76_RS22250 0.89 +0.0
4,638,543 + -0.6
4,638,858 + -1.1
4,638,876 - +0.6
4,638,900 - -0.8
4,639,181 - BWI76_RS22260 0.25 -0.3
4,639,302 + BWI76_RS22260 0.33 +1.2
4,639,339 - BWI76_RS22260 0.36 +0.0
4,639,339 - BWI76_RS22260 0.36 -0.4
4,639,405 - BWI76_RS22260 0.40 +0.5
4,639,667 - BWI76_RS22260 0.58 +1.3
4,639,897 - BWI76_RS22260 0.74 -0.7
4,639,955 + BWI76_RS22260 0.78 -2.4
4,640,399 - BWI76_RS22265 0.12 +0.4
4,640,663 + BWI76_RS22265 0.35 +0.2
4,640,894 - BWI76_RS22265 0.56 -1.8

Or see this region's nucleotide sequence