Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22250 and BWI76_RS22255 overlap by 1 nucleotides BWI76_RS22255 and BWI76_RS22260 are separated by 95 nucleotides BWI76_RS22260 and BWI76_RS22265 overlap by 4 nucleotides
BWI76_RS22250: BWI76_RS22250 - nitric oxide reductase transcription regulator, at 4,637,090 to 4,638,634
_RS22250
BWI76_RS22255: BWI76_RS22255 - transcriptional regulator, at 4,638,634 to 4,638,726
_RS22255
BWI76_RS22260: BWI76_RS22260 - anaerobic nitric oxide reductase flavorubredoxin, at 4,638,822 to 4,640,267
_RS22260
BWI76_RS22265: BWI76_RS22265 - NADH:flavorubredoxin oxidoreductase, at 4,640,264 to 4,641,397
_RS22265
Position (kb)
4638
4639
4640
4641 Strain fitness (log2 ratio)
-2
-1
0
1 at 4637.886 kb on + strand, within BWI76_RS22250 at 4638.004 kb on + strand, within BWI76_RS22250 at 4638.077 kb on + strand, within BWI76_RS22250 at 4638.102 kb on + strand, within BWI76_RS22250 at 4638.119 kb on - strand, within BWI76_RS22250 at 4638.169 kb on - strand, within BWI76_RS22250 at 4638.216 kb on - strand, within BWI76_RS22250 at 4638.235 kb on - strand, within BWI76_RS22250 at 4638.260 kb on + strand, within BWI76_RS22250 at 4638.458 kb on - strand, within BWI76_RS22250 at 4638.543 kb on + strand at 4638.858 kb on + strand at 4638.876 kb on - strand at 4638.900 kb on - strand at 4639.181 kb on - strand, within BWI76_RS22260 at 4639.302 kb on + strand, within BWI76_RS22260 at 4639.339 kb on - strand, within BWI76_RS22260 at 4639.339 kb on - strand, within BWI76_RS22260 at 4639.405 kb on - strand, within BWI76_RS22260 at 4639.667 kb on - strand, within BWI76_RS22260 at 4639.897 kb on - strand, within BWI76_RS22260 at 4639.955 kb on + strand, within BWI76_RS22260 at 4640.399 kb on - strand, within BWI76_RS22265 at 4640.663 kb on + strand, within BWI76_RS22265 at 4640.894 kb on - strand, within BWI76_RS22265
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 4,637,886 + BWI76_RS22250 0.52 -0.1 4,638,004 + BWI76_RS22250 0.59 -1.0 4,638,077 + BWI76_RS22250 0.64 -1.9 4,638,102 + BWI76_RS22250 0.66 -2.0 4,638,119 - BWI76_RS22250 0.67 +0.6 4,638,169 - BWI76_RS22250 0.70 -0.6 4,638,216 - BWI76_RS22250 0.73 -2.2 4,638,235 - BWI76_RS22250 0.74 -0.8 4,638,260 + BWI76_RS22250 0.76 -0.8 4,638,458 - BWI76_RS22250 0.89 +0.0 4,638,543 + -0.6 4,638,858 + -1.1 4,638,876 - +0.6 4,638,900 - -0.8 4,639,181 - BWI76_RS22260 0.25 -0.3 4,639,302 + BWI76_RS22260 0.33 +1.2 4,639,339 - BWI76_RS22260 0.36 +0.0 4,639,339 - BWI76_RS22260 0.36 -0.4 4,639,405 - BWI76_RS22260 0.40 +0.5 4,639,667 - BWI76_RS22260 0.58 +1.3 4,639,897 - BWI76_RS22260 0.74 -0.7 4,639,955 + BWI76_RS22260 0.78 -2.4 4,640,399 - BWI76_RS22265 0.12 +0.4 4,640,663 + BWI76_RS22265 0.35 +0.2 4,640,894 - BWI76_RS22265 0.56 -1.8
Or see this region's nucleotide sequence