Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2300 and DvMF_2301 are separated by 495 nucleotides DvMF_2301 and DvMF_2302 are separated by 98 nucleotides DvMF_2302 and DvMF_2303 are separated by 136 nucleotides
DvMF_2300: DvMF_2300 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq), at 2,888,613 to 2,891,423
_2300
DvMF_2301: DvMF_2301 - molybdenum cofactor biosynthesis protein C (RefSeq), at 2,891,919 to 2,892,410
_2301
DvMF_2302: DvMF_2302 - Dimethylmenaquinone methyltransferase (RefSeq), at 2,892,509 to 2,893,186
_2302
DvMF_2303: DvMF_2303 - esterase/lipase-like protein (RefSeq), at 2,893,323 to 2,894,333
_2303
Position (kb)
2891
2892
2893 Strain fitness (log2 ratio)
-2
-1
0
1 at 2891.074 kb on + strand, within DvMF_2300 at 2891.074 kb on + strand, within DvMF_2300 at 2891.074 kb on + strand, within DvMF_2300 at 2891.082 kb on - strand, within DvMF_2300 at 2891.082 kb on - strand, within DvMF_2300 at 2891.082 kb on - strand, within DvMF_2300 at 2891.082 kb on - strand, within DvMF_2300 at 2891.227 kb on + strand at 2891.235 kb on - strand at 2891.258 kb on - strand at 2891.308 kb on + strand at 2891.313 kb on + strand at 2891.346 kb on - strand at 2891.425 kb on - strand at 2891.432 kb on + strand at 2891.452 kb on - strand at 2891.457 kb on - strand at 2891.475 kb on + strand at 2891.475 kb on + strand at 2891.483 kb on - strand at 2891.483 kb on - strand at 2891.825 kb on + strand at 2891.830 kb on + strand at 2891.830 kb on + strand at 2891.830 kb on + strand at 2891.838 kb on - strand at 2891.840 kb on + strand at 2892.080 kb on + strand, within DvMF_2301 at 2892.186 kb on + strand, within DvMF_2301 at 2892.308 kb on + strand, within DvMF_2301 at 2892.320 kb on + strand, within DvMF_2301 at 2892.328 kb on - strand, within DvMF_2301 at 2892.328 kb on - strand, within DvMF_2301 at 2892.565 kb on + strand at 2892.906 kb on + strand, within DvMF_2302 at 2893.020 kb on + strand, within DvMF_2302 at 2893.030 kb on - strand, within DvMF_2302 at 2893.175 kb on - strand at 2893.257 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,891,074 + DvMF_2300 0.88 -0.1 2,891,074 + DvMF_2300 0.88 -0.5 2,891,074 + DvMF_2300 0.88 -0.5 2,891,082 - DvMF_2300 0.88 -0.3 2,891,082 - DvMF_2300 0.88 -0.7 2,891,082 - DvMF_2300 0.88 -0.6 2,891,082 - DvMF_2300 0.88 -0.4 2,891,227 + -0.1 2,891,235 - -0.0 2,891,258 - -0.4 2,891,308 + -0.3 2,891,313 + -0.3 2,891,346 - -0.3 2,891,425 - -0.5 2,891,432 + -0.4 2,891,452 - -0.1 2,891,457 - -0.2 2,891,475 + -0.4 2,891,475 + -0.2 2,891,483 - -0.5 2,891,483 - -0.4 2,891,825 + -1.5 2,891,830 + +0.7 2,891,830 + -1.3 2,891,830 + -0.0 2,891,838 - +0.4 2,891,840 + -0.1 2,892,080 + DvMF_2301 0.33 +0.3 2,892,186 + DvMF_2301 0.54 +1.0 2,892,308 + DvMF_2301 0.79 -0.3 2,892,320 + DvMF_2301 0.82 +0.2 2,892,328 - DvMF_2301 0.83 +0.7 2,892,328 - DvMF_2301 0.83 -0.3 2,892,565 + -0.8 2,892,906 + DvMF_2302 0.59 -0.6 2,893,020 + DvMF_2302 0.75 -1.8 2,893,030 - DvMF_2302 0.77 -2.4 2,893,175 - -0.3 2,893,257 + -1.1
Or see this region's nucleotide sequence