Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2287 and DvMF_2288 overlap by 32 nucleotides DvMF_2288 and DvMF_2289 overlap by 14 nucleotides DvMF_2289 and DvMF_2290 are separated by 61 nucleotides
DvMF_2287: DvMF_2287 - flagellar M-ring protein FliF (RefSeq), at 2,874,551 to 2,876,170
_2287
DvMF_2288: DvMF_2288 - flagellar motor switch protein FliG (RefSeq), at 2,876,139 to 2,877,155
_2288
DvMF_2289: DvMF_2289 - flagellar assembly protein FliH, putative (RefSeq), at 2,877,142 to 2,877,906
_2289
DvMF_2290: DvMF_2290 - flagellar protein export ATPase FliI (RefSeq), at 2,877,968 to 2,879,374
_2290
Position (kb)
2876
2877
2878 Strain fitness (log2 ratio)
-1
0
1
2 at 2875.170 kb on + strand, within DvMF_2287 at 2875.194 kb on + strand, within DvMF_2287 at 2875.206 kb on - strand, within DvMF_2287 at 2875.295 kb on - strand, within DvMF_2287 at 2875.362 kb on + strand, within DvMF_2287 at 2875.438 kb on - strand, within DvMF_2287 at 2875.673 kb on + strand, within DvMF_2287 at 2875.729 kb on + strand, within DvMF_2287 at 2875.815 kb on + strand, within DvMF_2287 at 2875.843 kb on - strand, within DvMF_2287 at 2875.870 kb on + strand, within DvMF_2287 at 2875.914 kb on + strand, within DvMF_2287 at 2875.936 kb on - strand, within DvMF_2287 at 2876.047 kb on + strand at 2876.062 kb on + strand at 2876.124 kb on + strand at 2876.441 kb on - strand, within DvMF_2288 at 2876.586 kb on + strand, within DvMF_2288 at 2876.622 kb on - strand, within DvMF_2288 at 2876.914 kb on - strand, within DvMF_2288 at 2876.935 kb on + strand, within DvMF_2288 at 2876.956 kb on + strand, within DvMF_2288 at 2876.977 kb on - strand, within DvMF_2288 at 2877.330 kb on + strand, within DvMF_2289 at 2877.354 kb on - strand, within DvMF_2289 at 2877.360 kb on - strand, within DvMF_2289 at 2877.673 kb on - strand, within DvMF_2289 at 2877.730 kb on + strand, within DvMF_2289 at 2877.949 kb on - strand at 2877.964 kb on + strand at 2878.154 kb on + strand, within DvMF_2290
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,875,170 + DvMF_2287 0.38 +1.4 2,875,194 + DvMF_2287 0.40 +0.8 2,875,206 - DvMF_2287 0.40 +1.3 2,875,295 - DvMF_2287 0.46 +2.1 2,875,362 + DvMF_2287 0.50 +1.0 2,875,438 - DvMF_2287 0.55 +1.9 2,875,673 + DvMF_2287 0.69 +1.3 2,875,729 + DvMF_2287 0.73 +0.9 2,875,815 + DvMF_2287 0.78 +1.2 2,875,843 - DvMF_2287 0.80 +1.1 2,875,870 + DvMF_2287 0.81 +1.2 2,875,914 + DvMF_2287 0.84 +1.1 2,875,936 - DvMF_2287 0.85 +1.1 2,876,047 + +1.7 2,876,062 + +1.1 2,876,124 + -0.5 2,876,441 - DvMF_2288 0.30 +1.0 2,876,586 + DvMF_2288 0.44 +1.1 2,876,622 - DvMF_2288 0.47 +0.8 2,876,914 - DvMF_2288 0.76 +1.4 2,876,935 + DvMF_2288 0.78 +0.9 2,876,956 + DvMF_2288 0.80 +0.8 2,876,977 - DvMF_2288 0.82 +1.3 2,877,330 + DvMF_2289 0.25 +1.7 2,877,354 - DvMF_2289 0.28 +1.6 2,877,360 - DvMF_2289 0.28 +1.7 2,877,673 - DvMF_2289 0.69 +1.6 2,877,730 + DvMF_2289 0.77 +1.5 2,877,949 - +1.1 2,877,964 + +0.4 2,878,154 + DvMF_2290 0.13 +1.5
Or see this region's nucleotide sequence