Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1646 and DvMF_1647 are separated by 163 nucleotides DvMF_1647 and DvMF_1648 are separated by 23 nucleotides DvMF_1648 and DvMF_1649 are separated by 10 nucleotides DvMF_1649 and DvMF_1650 are separated by 15 nucleotides DvMF_1650 and DvMF_1651 overlap by 14 nucleotides DvMF_1651 and DvMF_1652 overlap by 1 nucleotides
DvMF_1646: DvMF_1646 - phage protein (RefSeq), at 2,027,973 to 2,028,872
_1646
DvMF_1647: DvMF_1647 - no description, at 2,029,036 to 2,029,128
_1647
DvMF_1648: DvMF_1648 - hypothetical protein (RefSeq), at 2,029,152 to 2,029,499
_1648
DvMF_1649: DvMF_1649 - hypothetical protein (RefSeq), at 2,029,510 to 2,029,929
_1649
DvMF_1650: DvMF_1650 - hypothetical protein (RefSeq), at 2,029,945 to 2,030,313
_1650
DvMF_1651: DvMF_1651 - hypothetical protein (RefSeq), at 2,030,300 to 2,030,698
_1651
DvMF_1652: DvMF_1652 - phage head-tail adaptor (RefSeq), at 2,030,698 to 2,031,012
_1652
Position (kb)
2029
2030 Strain fitness (log2 ratio)
-1
0
1 at 2028.833 kb on + strand at 2028.883 kb on - strand at 2029.025 kb on - strand at 2029.259 kb on - strand, within DvMF_1648 at 2029.430 kb on + strand, within DvMF_1648 at 2029.471 kb on + strand at 2029.626 kb on - strand, within DvMF_1649 at 2030.082 kb on + strand, within DvMF_1650 at 2030.141 kb on + strand, within DvMF_1650 at 2030.144 kb on - strand, within DvMF_1650 at 2030.330 kb on - strand at 2030.743 kb on + strand, within DvMF_1652 at 2030.743 kb on + strand, within DvMF_1652 at 2030.900 kb on + strand, within DvMF_1652 at 2030.917 kb on - strand, within DvMF_1652
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,028,833 + -1.6 2,028,883 - -0.1 2,029,025 - +0.7 2,029,259 - DvMF_1648 0.31 +0.2 2,029,430 + DvMF_1648 0.80 -0.7 2,029,471 + -0.3 2,029,626 - DvMF_1649 0.28 +0.1 2,030,082 + DvMF_1650 0.37 -0.8 2,030,141 + DvMF_1650 0.53 +0.7 2,030,144 - DvMF_1650 0.54 +0.3 2,030,330 - -0.6 2,030,743 + DvMF_1652 0.14 +1.0 2,030,743 + DvMF_1652 0.14 +0.6 2,030,900 + DvMF_1652 0.64 -0.6 2,030,917 - DvMF_1652 0.70 +0.0
Or see this region's nucleotide sequence