Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1573 and DvMF_1574 are separated by 48 nucleotides DvMF_1574 and DvMF_1575 are separated by 94 nucleotides
DvMF_1573: DvMF_1573 - Undecaprenyl-phosphate galactose phosphotransferase, WbaP (RefSeq), at 1,939,091 to 1,940,503
_1573
DvMF_1574: DvMF_1574 - glycosyl transferase family 9 (RefSeq), at 1,940,552 to 1,941,691
_1574
DvMF_1575: DvMF_1575 - sulfate transporter (RefSeq), at 1,941,786 to 1,943,498
_1575
Position (kb)
1940
1941
1942 Strain fitness (log2 ratio)
-1
0
1
2 at 1939.709 kb on + strand, within DvMF_1573 at 1939.717 kb on - strand, within DvMF_1573 at 1939.774 kb on + strand, within DvMF_1573 at 1939.922 kb on - strand, within DvMF_1573 at 1939.971 kb on - strand, within DvMF_1573 at 1940.013 kb on + strand, within DvMF_1573 at 1940.021 kb on - strand, within DvMF_1573 at 1940.096 kb on - strand, within DvMF_1573 at 1940.466 kb on - strand at 1940.466 kb on - strand at 1940.525 kb on + strand at 1940.525 kb on + strand at 1940.528 kb on - strand at 1940.618 kb on + strand at 1940.637 kb on + strand at 1940.716 kb on - strand, within DvMF_1574 at 1941.107 kb on + strand, within DvMF_1574 at 1941.199 kb on + strand, within DvMF_1574 at 1941.338 kb on - strand, within DvMF_1574 at 1941.899 kb on - strand at 1941.940 kb on + strand at 1942.272 kb on + strand, within DvMF_1575 at 1942.399 kb on + strand, within DvMF_1575 at 1942.453 kb on + strand, within DvMF_1575 at 1942.463 kb on + strand, within DvMF_1575
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,939,709 + DvMF_1573 0.44 -0.1 1,939,717 - DvMF_1573 0.44 -0.0 1,939,774 + DvMF_1573 0.48 +0.2 1,939,922 - DvMF_1573 0.59 -0.0 1,939,971 - DvMF_1573 0.62 +0.8 1,940,013 + DvMF_1573 0.65 -1.4 1,940,021 - DvMF_1573 0.66 +0.2 1,940,096 - DvMF_1573 0.71 -0.1 1,940,466 - -0.7 1,940,466 - -0.6 1,940,525 + +0.0 1,940,525 + +0.4 1,940,528 - +1.1 1,940,618 + +1.2 1,940,637 + +1.7 1,940,716 - DvMF_1574 0.14 -0.1 1,941,107 + DvMF_1574 0.49 +0.1 1,941,199 + DvMF_1574 0.57 -0.2 1,941,338 - DvMF_1574 0.69 +2.1 1,941,899 - +0.1 1,941,940 + -1.3 1,942,272 + DvMF_1575 0.28 -0.5 1,942,399 + DvMF_1575 0.36 -0.5 1,942,453 + DvMF_1575 0.39 -0.3 1,942,463 + DvMF_1575 0.40 -0.1
Or see this region's nucleotide sequence