Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1075

Experiment: Defined MoLS4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_1074 and DvMF_1075 are separated by 70 nucleotidesDvMF_1075 and DvMF_1076 are separated by 150 nucleotides DvMF_1074: DvMF_1074 - hypothetical protein (RefSeq), at 1,314,497 to 1,315,180 _1074 DvMF_1075: DvMF_1075 - hypothetical protein (RefSeq), at 1,315,251 to 1,315,433 _1075 DvMF_1076: DvMF_1076 - dienelactone hydrolase-like protein (RefSeq), at 1,315,584 to 1,317,014 _1076 Position (kb) 1315 1316Strain fitness (log2 ratio) -1 0 1at 1314.280 kb on + strandat 1314.288 kb on - strandat 1314.288 kb on - strandat 1314.433 kb on - strandat 1314.745 kb on + strand, within DvMF_1074at 1315.099 kb on + strand, within DvMF_1074at 1315.107 kb on - strand, within DvMF_1074at 1315.394 kb on - strand, within DvMF_1075at 1315.456 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Defined MoLS4
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1,314,280 + -0.1
1,314,288 - -0.4
1,314,288 - -0.2
1,314,433 - -0.7
1,314,745 + DvMF_1074 0.36 -0.4
1,315,099 + DvMF_1074 0.88 -0.4
1,315,107 - DvMF_1074 0.89 -0.6
1,315,394 - DvMF_1075 0.78 +0.2
1,315,456 + -0.1

Or see this region's nucleotide sequence